| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301450
Identifier: 146301450
GI number: 146301450
Start: 4399792
End: 4400886
Strand: Reverse
Name: 146301450
Synonym: Fjoh_3708
Alternate gene names: NA
Gene position: 4400886-4399792 (Counterclockwise)
Preceding gene: 146301451
Following gene: 146301449
Centisome position: 72.18
GC content: 33.06
Gene sequence:
>1095_bases ATGATAAATTATATTCATATAGACGGTTACAAATCTATAAAGGAAGCTCATTTCCTCTTAGATCCTATTAATGTTTTAAT AGGTTCAAATGGTGTTGGGAAATCAAATTTCATATCTTTTTTCAAGATGGTGAATAATATTTATGAGGAAAGACTAGAAA ATTATTCAATAAGAAAGGGGGCAGAAACCTTTTTACATTTCGGCAGTAAAAATACTAGAGAAATAAAAGGAAGACTTGAA TTTGATAATACAAATGCGTACGGTTTCACATTACAGCCAACTGAAAGTAACAGTTTAATATTGGCTGATGAGACGGGATT TTTTAATAGTGAGAAAGGTTCTCAATTTTCGGTTAAAGGTGTTTGGTATCCTCAGAATATTAGCAGGAATTCTAAAGAGA GTAAATTGAGATCTGCTAAAGGTTCTATTCCCACTTATATAAATCAATATTTATCTAGTTTTAAAATATATCATTTCCAT GATACGAGCGATACATCGCCTCTTAGAACTCCTGCCGATATAAATGATAATATTGCATTAAGAGAAGATGGGGCAAATCT TGGAGCATTCTTGTATTTACTGCAGGAAAGATATGAGAAGCACTTTAAGAGAATTGAATATGTTGTTAAGTCTGTTGCTC CGTACTTTGAAAGATTTCAATTACAGCCGGACAGATTAAATGAGAACAGAATTAATTTAGAGTGGACTGAAATCAACCAT CCAGACATTTTATTTAATGCATCACATTTTTCTGATGGGACATTGCGTTTTATTGCTTTGGCGACTTTGTTAATGCAACC TAATATGCCACAAGTAATAATCATTGATGAACCTGAACTTGGGCTTCATCCTGTTGCAATAAATACTTTGGCAGGGTTGA TAAAGAAAGCATCTGCTAAAAGTCAAATCATTATATCAACACAGTCGGTAAATCTGGTAGGGAATTTTGAACCTGAGAAC ATAATTACTGTTGACAGAGTGGACGGTCAATCTGTTTTTAACAGGTTAGAAAAAGAAAATTTAGAAGGCTGGTTGTCCGA TTTTACATTGGGAGATCTTTGGCTGAAAAACATAATTAAAGGACAGCCATATTAA
Upstream 100 bases:
>100_bases AAATTCCATTTGTTTTAATGCTTAATGAGCCTATCAAGATAGGTAGTGTTATCTAATTAAGGATAATGAAAGTAGTATTA GAATCATAATCAGAAAAAAA
Downstream 100 bases:
>100_bases GATGAAAAGAGTACACATTATAGTTGAAGGGCAAACGGAAGTTAGAGTCTTTTATTCGATCTTAGTGCCATATATACAAT CTAAAGTTGAGAATGTATAT
Product: ATPase-like protein
Products: NA
Alternate protein names: SMC Domain-Containing Protein; ATPase-Like Protein; RecF/RecN/SMC N Terminal Domain; ATPase-Like; Recf Like Family Protein; Endonuclease III; ATPase
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MINYIHIDGYKSIKEAHFLLDPINVLIGSNGVGKSNFISFFKMVNNIYEERLENYSIRKGAETFLHFGSKNTREIKGRLE FDNTNAYGFTLQPTESNSLILADETGFFNSEKGSQFSVKGVWYPQNISRNSKESKLRSAKGSIPTYINQYLSSFKIYHFH DTSDTSPLRTPADINDNIALREDGANLGAFLYLLQERYEKHFKRIEYVVKSVAPYFERFQLQPDRLNENRINLEWTEINH PDILFNASHFSDGTLRFIALATLLMQPNMPQVIIIDEPELGLHPVAINTLAGLIKKASAKSQIIISTQSVNLVGNFEPEN IITVDRVDGQSVFNRLEKENLEGWLSDFTLGDLWLKNIIKGQPY
Sequences:
>Translated_364_residues MINYIHIDGYKSIKEAHFLLDPINVLIGSNGVGKSNFISFFKMVNNIYEERLENYSIRKGAETFLHFGSKNTREIKGRLE FDNTNAYGFTLQPTESNSLILADETGFFNSEKGSQFSVKGVWYPQNISRNSKESKLRSAKGSIPTYINQYLSSFKIYHFH DTSDTSPLRTPADINDNIALREDGANLGAFLYLLQERYEKHFKRIEYVVKSVAPYFERFQLQPDRLNENRINLEWTEINH PDILFNASHFSDGTLRFIALATLLMQPNMPQVIIIDEPELGLHPVAINTLAGLIKKASAKSQIIISTQSVNLVGNFEPEN IITVDRVDGQSVFNRLEKENLEGWLSDFTLGDLWLKNIIKGQPY >Mature_364_residues MINYIHIDGYKSIKEAHFLLDPINVLIGSNGVGKSNFISFFKMVNNIYEERLENYSIRKGAETFLHFGSKNTREIKGRLE FDNTNAYGFTLQPTESNSLILADETGFFNSEKGSQFSVKGVWYPQNISRNSKESKLRSAKGSIPTYINQYLSSFKIYHFH DTSDTSPLRTPADINDNIALREDGANLGAFLYLLQERYEKHFKRIEYVVKSVAPYFERFQLQPDRLNENRINLEWTEINH PDILFNASHFSDGTLRFIALATLLMQPNMPQVIIIDEPELGLHPVAINTLAGLIKKASAKSQIIISTQSVNLVGNFEPEN IITVDRVDGQSVFNRLEKENLEGWLSDFTLGDLWLKNIIKGQPY
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41600; Mature: 41600
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINYIHIDGYKSIKEAHFLLDPINVLIGSNGVGKSNFISFFKMVNNIYEERLENYSIRKG CCEEEEECCHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH AETFLHFGSKNTREIKGRLEFDNTNAYGFTLQPTESNSLILADETGFFNSEKGSQFSVKG HHHHHHCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEE VWYPQNISRNSKESKLRSAKGSIPTYINQYLSSFKIYHFHDTSDTSPLRTPADINDNIAL EECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCEEE REDGANLGAFLYLLQERYEKHFKRIEYVVKSVAPYFERFQLQPDRLNENRINLEWTEINH EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCC PDILFNASHFSDGTLRFIALATLLMQPNMPQVIIIDEPELGLHPVAINTLAGLIKKASAK CEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCC SQIIISTQSVNLVGNFEPENIITVDRVDGQSVFNRLEKENLEGWLSDFTLGDLWLKNIIK CEEEEEEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC GQPY CCCC >Mature Secondary Structure MINYIHIDGYKSIKEAHFLLDPINVLIGSNGVGKSNFISFFKMVNNIYEERLENYSIRKG CCEEEEECCHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH AETFLHFGSKNTREIKGRLEFDNTNAYGFTLQPTESNSLILADETGFFNSEKGSQFSVKG HHHHHHCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEE VWYPQNISRNSKESKLRSAKGSIPTYINQYLSSFKIYHFHDTSDTSPLRTPADINDNIAL EECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCEEE REDGANLGAFLYLLQERYEKHFKRIEYVVKSVAPYFERFQLQPDRLNENRINLEWTEINH EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCC PDILFNASHFSDGTLRFIALATLLMQPNMPQVIIIDEPELGLHPVAINTLAGLIKKASAK CEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCC SQIIISTQSVNLVGNFEPENIITVDRVDGQSVFNRLEKENLEGWLSDFTLGDLWLKNIIK CEEEEEEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC GQPY CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA