| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301438
Identifier: 146301438
GI number: 146301438
Start: 4388450
End: 4389271
Strand: Reverse
Name: 146301438
Synonym: Fjoh_3696
Alternate gene names: NA
Gene position: 4389271-4388450 (Counterclockwise)
Preceding gene: 146301441
Following gene: 146301437
Centisome position: 71.99
GC content: 38.44
Gene sequence:
>822_bases ATGGACTGGCGACAATACGACCCAGCTATTGGTAGGTTTAATGTAATTGACCCATTAACCGAGTTAGCCCCTATGCATAA TCCTTACAGGTTTGGTTTTAACAATCCTGTTTACTGGTCTGACCCATCTGGTCTGTTTGAAAACGATAATCAAGGTCTAG CAATTTGTCCAACGTGTCCAAATACACCTGCATTTAAACCGCTAATTGATGACCCCAATAATATATATGATTATGACCCT CAAACACAAACTGCTAGTAAAGCTACTGAACTTAATGAAGTTGTTGTACAAGGAAAATCTAAAAAAAGTAGTGCAGTAGA TCATGCAAACTCTATTAATGACAGAATTGGAGACGGCGCTGATATTTTAGCATTAACTAATAATAAAGGTGGTTCATTTA GGTTGACTAACAATGGTAGTTATAACCCACGAAACTTTAGTTTTAAATATTATAAATCTAATTGGATTGGAGGAAGTGCA GCAAATATAAAGACGTTTAATGTAAGTAAATTAATAAAAAGAGGCTCCATTGCTACTACCGTTATTCTTGGAACTATAGA AGTTGGACAAGGAGTAGCTGGCGATTACCAAAACTACCAAAACACTGGATATACTAACGGTGAGAATACAGCGGTAGCAA CCGCAAAAGTTGGGGCTGGTATTGCTGTTGGTTGGGCTGCAGGAGCTGCGACAGGAGCAGCAGTTGGAAGTCTAATTCCA ATACCAATTGTTGGAACAGTTGCAGGAGCCATTGTTGGAGGAGTTGCAGGATATTATGCGAGTGAAACAGCAGGAAATTT AGTAGAGAAAGCTTATGAATAA
Upstream 100 bases:
>100_bases AAGGACGTTCTTATTACACAACAGCAAGTTTGTAAATCCTTATAAGTATAAGTACAATGGCAAGGAGCTCCAAGACGAGC TGGGGCTTAATGTTACAGCG
Downstream 100 bases:
>100_bases TATACAAATGAAAACAATAATAATAGAGAAAAATAAAAAATACTTCAAAAGAATTGCAATAATACTATTGATGATTTTTG TCTTATGTGGACTGGTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MDWRQYDPAIGRFNVIDPLTELAPMHNPYRFGFNNPVYWSDPSGLFENDNQGLAICPTCPNTPAFKPLIDDPNNIYDYDP QTQTASKATELNEVVVQGKSKKSSAVDHANSINDRIGDGADILALTNNKGGSFRLTNNGSYNPRNFSFKYYKSNWIGGSA ANIKTFNVSKLIKRGSIATTVILGTIEVGQGVAGDYQNYQNTGYTNGENTAVATAKVGAGIAVGWAAGAATGAAVGSLIP IPIVGTVAGAIVGGVAGYYASETAGNLVEKAYE
Sequences:
>Translated_273_residues MDWRQYDPAIGRFNVIDPLTELAPMHNPYRFGFNNPVYWSDPSGLFENDNQGLAICPTCPNTPAFKPLIDDPNNIYDYDP QTQTASKATELNEVVVQGKSKKSSAVDHANSINDRIGDGADILALTNNKGGSFRLTNNGSYNPRNFSFKYYKSNWIGGSA ANIKTFNVSKLIKRGSIATTVILGTIEVGQGVAGDYQNYQNTGYTNGENTAVATAKVGAGIAVGWAAGAATGAAVGSLIP IPIVGTVAGAIVGGVAGYYASETAGNLVEKAYE >Mature_273_residues MDWRQYDPAIGRFNVIDPLTELAPMHNPYRFGFNNPVYWSDPSGLFENDNQGLAICPTCPNTPAFKPLIDDPNNIYDYDP QTQTASKATELNEVVVQGKSKKSSAVDHANSINDRIGDGADILALTNNKGGSFRLTNNGSYNPRNFSFKYYKSNWIGGSA ANIKTFNVSKLIKRGSIATTVILGTIEVGQGVAGDYQNYQNTGYTNGENTAVATAKVGAGIAVGWAAGAATGAAVGSLIP IPIVGTVAGAIVGGVAGYYASETAGNLVEKAYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28887; Mature: 28887
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWRQYDPAIGRFNVIDPLTELAPMHNPYRFGFNNPVYWSDPSGLFENDNQGLAICPTCP CCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCCCCEEEECCCC NTPAFKPLIDDPNNIYDYDPQTQTASKATELNEVVVQGKSKKSSAVDHANSINDRIGDGA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC DILALTNNKGGSFRLTNNGSYNPRNFSFKYYKSNWIGGSAANIKTFNVSKLIKRGSIATT EEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEECHHHHHHCCCEEEE VILGTIEVGQGVAGDYQNYQNTGYTNGENTAVATAKVGAGIAVGWAAGAATGAAVGSLIP EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECHHCCHHHHHHHCCCC IPIVGTVAGAIVGGVAGYYASETAGNLVEKAYE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDWRQYDPAIGRFNVIDPLTELAPMHNPYRFGFNNPVYWSDPSGLFENDNQGLAICPTCP CCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCCCCEEEECCCC NTPAFKPLIDDPNNIYDYDPQTQTASKATELNEVVVQGKSKKSSAVDHANSINDRIGDGA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC DILALTNNKGGSFRLTNNGSYNPRNFSFKYYKSNWIGGSAANIKTFNVSKLIKRGSIATT EEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEECHHHHHHCCCEEEE VILGTIEVGQGVAGDYQNYQNTGYTNGENTAVATAKVGAGIAVGWAAGAATGAAVGSLIP EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECHHCCHHHHHHHCCCC IPIVGTVAGAIVGGVAGYYASETAGNLVEKAYE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA