| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301436
Identifier: 146301436
GI number: 146301436
Start: 4387196
End: 4387783
Strand: Reverse
Name: 146301436
Synonym: Fjoh_3694
Alternate gene names: NA
Gene position: 4387783-4387196 (Counterclockwise)
Preceding gene: 146301437
Following gene: 146301435
Centisome position: 71.97
GC content: 27.04
Gene sequence:
>588_bases ATGAAACGGAGTGGTTCCGAAACAGGAACTTCAACAGGTGAAGAGCATATAAATAAAAAAATGAAAGAAATAATAATAGC GTTAGATAAGAAAAAATTAATACTTCTTCTATTTGCAGGAGTGGTTTTTACTTTTTTTAGTTTTTGGATTATTTTAAAAC CCTCAGATTTTGTTAATTTCATTACACGGAGTGAAAATATTATATTTATAGCAGGGATTTTAGGATTAATAGTATTTGGT TTTGGTTCAGTTTTATTGTTCTTTAAATTGTTTGATAATAAGCCTGGATTAATTATAAATGAAAGAGGCATAATCGATAA TAGTAATTCAAATTCTATAGGTTTGATTAAGTGGTCAGACATTACTAAAATTAGTCAGAAGAAAGTTGTATCAACAAAAT TCTTGTTAATAGAAATAAGTAATCCAGAAGATTATATACAAAAGGCAAATCAAATTAAGAAATTGTCATTAAAACAAAAC TTAAAAACCTATGGTACACCAATTACAATAACATCAGTAGGCTTACAATGTTCTTTTGAAGACTTAGAGCAAATGATTTT GGAAAGCTATGATCAAAACAGGCAATAA
Upstream 100 bases:
>100_bases TCGACGTATCGGATATGTCCACGTTAGATAGTGCAGAATTATATTTTGTGCCTACAAAAGAGAGCAAGCAAAACAAGTCA ATACTAGAAAAGCCACTTCA
Downstream 100 bases:
>100_bases TCCATCAGATGTGTTGATAAAAAAGAAATATTAAATTCCATTTATAACAAATAAGCGTTAATCCTGCTCCGCAGGATCGG GTAATGTTTCAAAGTTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKRSGSETGTSTGEEHINKKMKEIIIALDKKKLILLLFAGVVFTFFSFWIILKPSDFVNFITRSENIIFIAGILGLIVFG FGSVLLFFKLFDNKPGLIINERGIIDNSNSNSIGLIKWSDITKISQKKVVSTKFLLIEISNPEDYIQKANQIKKLSLKQN LKTYGTPITITSVGLQCSFEDLEQMILESYDQNRQ
Sequences:
>Translated_195_residues MKRSGSETGTSTGEEHINKKMKEIIIALDKKKLILLLFAGVVFTFFSFWIILKPSDFVNFITRSENIIFIAGILGLIVFG FGSVLLFFKLFDNKPGLIINERGIIDNSNSNSIGLIKWSDITKISQKKVVSTKFLLIEISNPEDYIQKANQIKKLSLKQN LKTYGTPITITSVGLQCSFEDLEQMILESYDQNRQ >Mature_195_residues MKRSGSETGTSTGEEHINKKMKEIIIALDKKKLILLLFAGVVFTFFSFWIILKPSDFVNFITRSENIIFIAGILGLIVFG FGSVLLFFKLFDNKPGLIINERGIIDNSNSNSIGLIKWSDITKISQKKVVSTKFLLIEISNPEDYIQKANQIKKLSLKQN LKTYGTPITITSVGLQCSFEDLEQMILESYDQNRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22077; Mature: 22077
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSGSETGTSTGEEHINKKMKEIIIALDKKKLILLLFAGVVFTFFSFWIILKPSDFVNF CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHH ITRSENIIFIAGILGLIVFGFGSVLLFFKLFDNKPGLIINERGIIDNSNSNSIGLIKWSD HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCCCEEEEEEECC ITKISQKKVVSTKFLLIEISNPEDYIQKANQIKKLSLKQNLKTYGTPITITSVGLQCSFE CHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEECHH DLEQMILESYDQNRQ HHHHHHHHHHCCCCC >Mature Secondary Structure MKRSGSETGTSTGEEHINKKMKEIIIALDKKKLILLLFAGVVFTFFSFWIILKPSDFVNF CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHH ITRSENIIFIAGILGLIVFGFGSVLLFFKLFDNKPGLIINERGIIDNSNSNSIGLIKWSD HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCCCEEEEEEECC ITKISQKKVVSTKFLLIEISNPEDYIQKANQIKKLSLKQNLKTYGTPITITSVGLQCSFE CHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEECHH DLEQMILESYDQNRQ HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA