| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301418
Identifier: 146301418
GI number: 146301418
Start: 4369877
End: 4370746
Strand: Reverse
Name: 146301418
Synonym: Fjoh_3676
Alternate gene names: NA
Gene position: 4370746-4369877 (Counterclockwise)
Preceding gene: 146301420
Following gene: 146301417
Centisome position: 71.69
GC content: 38.62
Gene sequence:
>870_bases ATGAGTAAAATTATGAAAGCAATTCAAAACACCGCATCCGATTTAATTTATCGAGTTATTTCACAGAACATCGATCCAAT TGGCATTTACTGTTTTGCAGAGAAGAAAAGCAGTTATACTTTTAATGAGCCTTTCCAGAAACCCGCTCAGAAAGAAAAGC ATGTCCATCTTTATCTGCTGGTTATAACCGAAGAGTTCGAGGATAATATCGGCAATGACCTGACCGACAAGATAAAGAGC AGATCAAGAGGCCAGATAACGGTAACGATTCTCATGCACAGCCTGAGAAACATCGTCAAATTATATGGAGACCAGCAGTA TTTCTTCTGGAATATTTTTAAGAATGCGCAGAGGATCCATATAGATGCATACAGATCACCAATAATCTGGGCGAAAAATC CAGAAAAGAGATATGTGAAAAGCACTTCAGCATACGCAGGAGACAGAAGAAATGTTAGTGAATCGATCTGGGATCTTATC TATAATAACGACCAGTATTTTTCCTATGAAGTCAGAATGTGTTCCCTTCATCAGATAGTGGAACAGACCTGTCTTTCCCT TATAAGGGTATTTCTTGGATATACCCCTAATCATTTTTCTCTGGGCTACTTATTTGAGCTGTGCGAATACTTCACAAGCA TGACTTCTGAATATTTTCCCCGAAACAGCAGTGATGAAAAAAACATGTTCAAGATTTTGAAAAAGAACCCAAATACGCTT CGATTCAGCAGAACAAACAGTTTTGGTTACGATTATTATGGAATGATGGAAGGCAGATGCCGTGATTTTATGAAAGAAGC GGAAGCCATGATCCAGAAGGAATTGGAGAGGCTTGAGGGAATTCATCAGCAGGAAGTTTTATCAGCATAA
Upstream 100 bases:
>100_bases TGTACGGTACGGTAAAATTTGATGCCGTACGGTACAAGTAATTGCTTACTTGCCTGTGTGTTAAACAAAAATACAATTTT TCAGACAAGTATTAACTAAA
Downstream 100 bases:
>100_bases AAAAATGAAGTTATGGAAACCGATAAAATAAAAAAACTGGAAGACATCAGGGTGTTAAGCGGAAAACTGCTTAATGCCCT GAAACCAGCTGACGACAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSKIMKAIQNTASDLIYRVISQNIDPIGIYCFAEKKSSYTFNEPFQKPAQKEKHVHLYLLVITEEFEDNIGNDLTDKIKS RSRGQITVTILMHSLRNIVKLYGDQQYFFWNIFKNAQRIHIDAYRSPIIWAKNPEKRYVKSTSAYAGDRRNVSESIWDLI YNNDQYFSYEVRMCSLHQIVEQTCLSLIRVFLGYTPNHFSLGYLFELCEYFTSMTSEYFPRNSSDEKNMFKILKKNPNTL RFSRTNSFGYDYYGMMEGRCRDFMKEAEAMIQKELERLEGIHQQEVLSA
Sequences:
>Translated_289_residues MSKIMKAIQNTASDLIYRVISQNIDPIGIYCFAEKKSSYTFNEPFQKPAQKEKHVHLYLLVITEEFEDNIGNDLTDKIKS RSRGQITVTILMHSLRNIVKLYGDQQYFFWNIFKNAQRIHIDAYRSPIIWAKNPEKRYVKSTSAYAGDRRNVSESIWDLI YNNDQYFSYEVRMCSLHQIVEQTCLSLIRVFLGYTPNHFSLGYLFELCEYFTSMTSEYFPRNSSDEKNMFKILKKNPNTL RFSRTNSFGYDYYGMMEGRCRDFMKEAEAMIQKELERLEGIHQQEVLSA >Mature_288_residues SKIMKAIQNTASDLIYRVISQNIDPIGIYCFAEKKSSYTFNEPFQKPAQKEKHVHLYLLVITEEFEDNIGNDLTDKIKSR SRGQITVTILMHSLRNIVKLYGDQQYFFWNIFKNAQRIHIDAYRSPIIWAKNPEKRYVKSTSAYAGDRRNVSESIWDLIY NNDQYFSYEVRMCSLHQIVEQTCLSLIRVFLGYTPNHFSLGYLFELCEYFTSMTSEYFPRNSSDEKNMFKILKKNPNTLR FSRTNSFGYDYYGMMEGRCRDFMKEAEAMIQKELERLEGIHQQEVLSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34198; Mature: 34067
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIMKAIQNTASDLIYRVISQNIDPIGIYCFAEKKSSYTFNEPFQKPAQKEKHVHLYLL CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHCHHHCCCCEEEEEE VITEEFEDNIGNDLTDKIKSRSRGQITVTILMHSLRNIVKLYGDQQYFFWNIFKNAQRIH EEEEHHHHCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCEEE IDAYRSPIIWAKNPEKRYVKSTSAYAGDRRNVSESIWDLIYNNDQYFSYEVRMCSLHQIV EEECCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHH EQTCLSLIRVFLGYTPNHFSLGYLFELCEYFTSMTSEYFPRNSSDEKNMFKILKKNPNTL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEE RFSRTNSFGYDYYGMMEGRCRDFMKEAEAMIQKELERLEGIHQQEVLSA EEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure SKIMKAIQNTASDLIYRVISQNIDPIGIYCFAEKKSSYTFNEPFQKPAQKEKHVHLYLL HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHCHHHCCCCEEEEEE VITEEFEDNIGNDLTDKIKSRSRGQITVTILMHSLRNIVKLYGDQQYFFWNIFKNAQRIH EEEEHHHHCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCEEE IDAYRSPIIWAKNPEKRYVKSTSAYAGDRRNVSESIWDLIYNNDQYFSYEVRMCSLHQIV EEECCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHH EQTCLSLIRVFLGYTPNHFSLGYLFELCEYFTSMTSEYFPRNSSDEKNMFKILKKNPNTL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEE RFSRTNSFGYDYYGMMEGRCRDFMKEAEAMIQKELERLEGIHQQEVLSA EEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA