| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301366
Identifier: 146301366
GI number: 146301366
Start: 4320725
End: 4321285
Strand: Reverse
Name: 146301366
Synonym: Fjoh_3624
Alternate gene names: NA
Gene position: 4321285-4320725 (Counterclockwise)
Preceding gene: 146301367
Following gene: 146301365
Centisome position: 70.88
GC content: 35.47
Gene sequence:
>561_bases ATGAAAAAGAAGAAAAAAAACTTTGAAACCAAGTTCTGGGCTGGATTTGAGGCGGGAAATCCATTTGAAGCATCTGATGC CCTTTTTGATTTTGCACATCTTGACTACTATAAGCGAAATTTAACGCAGGCAGTACTGTACAGCTTTAAAGAAGAAATAT GCAGTAATGATAGACCAAGCGAGATTTTTATATTCTATAAAGCAATATGCTCATTTTTGAAAACATACTACTGCCTGCAT AAAAAAAGCAGTAAATGGAGAGTGAAAGAGTCAGTGCGCACTGAAAATGTATTTCATCTCACTTCATTGACAAAGCAGGA ATATGACAATCCTTTCACAGTATTTCGAAAGGCATTTGCAGAGAAAAGCCTTAAGGAGTTTGAATTTTTCCTTTCTGAAA TAGTGAGCGTTTCATTGTCTCCATACAAAGGAGACGGTGATATTGATCTTACGACTCCGTATATCCATTTAATAAAAATG CTTGATGCAGGAGAGCTTATGCGTGAAAGAGGGCTTGAAAAAATAAAAAAAGTTAATGAATCTAAAGAGAATGCCGAATG A
Upstream 100 bases:
>100_bases CGTGCAGTGAAGCGGAAGGGCTTGATAAACTGCATAAGCTTTATTTAGAGACTAATAGTGAAAATAAAAATGAACAAATG GATAACTAATTTTTTAAATC
Downstream 100 bases:
>100_bases TGAAGTTAGTGCATCATTACATAGATACTAGATTTAACTAATAAAATATATAGATATGAAAAAAAATAAAATCAAATTAA ATAATCTGGTTGAAAATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKKKKKNFETKFWAGFEAGNPFEASDALFDFAHLDYYKRNLTQAVLYSFKEEICSNDRPSEIFIFYKAICSFLKTYYCLH KKSSKWRVKESVRTENVFHLTSLTKQEYDNPFTVFRKAFAEKSLKEFEFFLSEIVSVSLSPYKGDGDIDLTTPYIHLIKM LDAGELMRERGLEKIKKVNESKENAE
Sequences:
>Translated_186_residues MKKKKKNFETKFWAGFEAGNPFEASDALFDFAHLDYYKRNLTQAVLYSFKEEICSNDRPSEIFIFYKAICSFLKTYYCLH KKSSKWRVKESVRTENVFHLTSLTKQEYDNPFTVFRKAFAEKSLKEFEFFLSEIVSVSLSPYKGDGDIDLTTPYIHLIKM LDAGELMRERGLEKIKKVNESKENAE >Mature_186_residues MKKKKKNFETKFWAGFEAGNPFEASDALFDFAHLDYYKRNLTQAVLYSFKEEICSNDRPSEIFIFYKAICSFLKTYYCLH KKSSKWRVKESVRTENVFHLTSLTKQEYDNPFTVFRKAFAEKSLKEFEFFLSEIVSVSLSPYKGDGDIDLTTPYIHLIKM LDAGELMRERGLEKIKKVNESKENAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21888; Mature: 21888
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKKKNFETKFWAGFEAGNPFEASDALFDFAHLDYYKRNLTQAVLYSFKEEICSNDRPS CCCCCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EIFIFYKAICSFLKTYYCLHKKSSKWRVKESVRTENVFHLTSLTKQEYDNPFTVFRKAFA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH EKSLKEFEFFLSEIVSVSLSPYKGDGDIDLTTPYIHLIKMLDAGELMRERGLEKIKKVNE HHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKENAE HCCCCC >Mature Secondary Structure MKKKKKNFETKFWAGFEAGNPFEASDALFDFAHLDYYKRNLTQAVLYSFKEEICSNDRPS CCCCCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EIFIFYKAICSFLKTYYCLHKKSSKWRVKESVRTENVFHLTSLTKQEYDNPFTVFRKAFA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH EKSLKEFEFFLSEIVSVSLSPYKGDGDIDLTTPYIHLIKMLDAGELMRERGLEKIKKVNE HHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKENAE HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA