| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301356
Identifier: 146301356
GI number: 146301356
Start: 4311787
End: 4312239
Strand: Reverse
Name: 146301356
Synonym: Fjoh_3614
Alternate gene names: NA
Gene position: 4312239-4311787 (Counterclockwise)
Preceding gene: 146301357
Following gene: 146301355
Centisome position: 70.73
GC content: 31.57
Gene sequence:
>453_bases ATGAGTTTAGGTGATTTATTTCCAGACAATCTGAAAGAAGACTTTGCTGAACGAAATATTGATGTTGGTAATGCTTTATT AATTAAACTAGAAAACTTACAGGTCAATTATGACAAATATGTTATTTTAGTTGGTGTAAATGAAGTAGAATTGGCAGTAG CTTACGTGATTATAAATACCGATATTAATCAGAATGTTTATCCTACAGCATATTTGCAAAGCCTTCATTTGACAATTGAT GTGGCAAGGCATCCTTTTTTAGAGTATGATAGTCATATAAATTGTACTGAATTAAGAGAATTTAATAAACAGGAACTTGT TGATTTTATAATTTCAAACCCTGAAAGGGTCGTTGGAAGTATTGATCCAGTTCTTTTATCAGATGTAAAAGATGCAATAA AAGGGGCAACAACGATTACGCCCATTCTCAAACGGAAATATGGCTTCGTTTAA
Upstream 100 bases:
>100_bases GGGTTATTAATTATCTAGATATGGCTAAAGCTATAGGTGCTGATGAAAAAACTTTAAAATATATTAATCAGCAAATGATT AATGAAAGCATTCAATTGGC
Downstream 100 bases:
>100_bases AAATTTAAAACCCTCGATTTTGAGGGTTTTTTTATGGGTATAATCGAAAAATTATTAGGAAAATAATTAAAGTAAATCTA CTTTCGTATTATGGAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSLGDLFPDNLKEDFAERNIDVGNALLIKLENLQVNYDKYVILVGVNEVELAVAYVIINTDINQNVYPTAYLQSLHLTID VARHPFLEYDSHINCTELREFNKQELVDFIISNPERVVGSIDPVLLSDVKDAIKGATTITPILKRKYGFV
Sequences:
>Translated_150_residues MSLGDLFPDNLKEDFAERNIDVGNALLIKLENLQVNYDKYVILVGVNEVELAVAYVIINTDINQNVYPTAYLQSLHLTID VARHPFLEYDSHINCTELREFNKQELVDFIISNPERVVGSIDPVLLSDVKDAIKGATTITPILKRKYGFV >Mature_149_residues SLGDLFPDNLKEDFAERNIDVGNALLIKLENLQVNYDKYVILVGVNEVELAVAYVIINTDINQNVYPTAYLQSLHLTIDV ARHPFLEYDSHINCTELREFNKQELVDFIISNPERVVGSIDPVLLSDVKDAIKGATTITPILKRKYGFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16981; Mature: 16849
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGDLFPDNLKEDFAERNIDVGNALLIKLENLQVNYDKYVILVGVNEVELAVAYVIINT CCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECEEECCCCEEEEEECCCEEEEEEEEEEEC DINQNVYPTAYLQSLHLTIDVARHPFLEYDSHINCTELREFNKQELVDFIISNPERVVGS CCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCHHHHCC IDPVLLSDVKDAIKGATTITPILKRKYGFV CCHHHHHHHHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure SLGDLFPDNLKEDFAERNIDVGNALLIKLENLQVNYDKYVILVGVNEVELAVAYVIINT CCCCCCCCHHHHHHHHCCCCCCCEEEEEEECEEECCCCEEEEEECCCEEEEEEEEEEEC DINQNVYPTAYLQSLHLTIDVARHPFLEYDSHINCTELREFNKQELVDFIISNPERVVGS CCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCHHHHCC IDPVLLSDVKDAIKGATTITPILKRKYGFV CCHHHHHHHHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA