| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301352
Identifier: 146301352
GI number: 146301352
Start: 4308582
End: 4309274
Strand: Reverse
Name: 146301352
Synonym: Fjoh_3610
Alternate gene names: NA
Gene position: 4309274-4308582 (Counterclockwise)
Preceding gene: 146301353
Following gene: 146301351
Centisome position: 70.68
GC content: 37.09
Gene sequence:
>693_bases TTGAACTGGGACAGCTTCAAGTGGAGAAATTATGATTATGCAATTGGAAGATTTATGTGTATTGACCCGTTAGCGGAGAA GTATAGTTTCCAGTCGCCATATAATTTCTCTGAAAACAGAGTTATTGATTCGAGAGAATTAGAAGGATTAGAAGCATACA GATTATTTAGAACGGAAAAGGAGGCGGCTAATAATTGGGGACAGCAATATAGTGGTAAATCGATTCGTGAAAATAAAGAA TTTGGTTCAACGATTGGAAAGAGCATTGATGCTAAGGGCAATGTTGGATATTCCTATGCCCCGCCAGCTCCTGGCGATAA TGATGGTGTTACAATTAGTGATGCACCAGAAGGGACAACGCCAACTGCTGATATACACGCTCACGGAGCATATGATTCAG AATATTTTAATAATGATTTTTCTCGTGGAGACAAAAAAGGCAATGACAATACAGGACTGAATGGCTACTTAACAACTCCA AGTGGAACTCTTCAAAAATATAACCCTAAAACTAAGGCAATAACAATTGTAAATGAGACACAAGCAAGTGACCCAAAAGA CCCTGATAGAAAAAATAACATTTCCCCAAATGAAAAGAAGACTGAAAAGCCAACTTCGGATAGTAAACAAAAAACAAATA CTAATGTTTGGCCAGAAATTAAGCCTTTAATTCCAACAATTCCAGCAAAATAA
Upstream 100 bases:
>100_bases TCTTAAAAGGTTTGCATTTAACAGGTAAAAACTTGTAAAAATAGTAATAAACCCTTATAAGTATAAGTTCCAAGAGCAGG AGCGTCAGGATGAGCTGGGA
Downstream 100 bases:
>100_bases ATTTAAAATCTAAAATATGAAAAAGCATAATGTAGTATTAGTGGTTTTTTTATTAATATTCTTTAATTCATTCTCCCAAG AGAAAACCAAGTCACAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MNWDSFKWRNYDYAIGRFMCIDPLAEKYSFQSPYNFSENRVIDSRELEGLEAYRLFRTEKEAANNWGQQYSGKSIRENKE FGSTIGKSIDAKGNVGYSYAPPAPGDNDGVTISDAPEGTTPTADIHAHGAYDSEYFNNDFSRGDKKGNDNTGLNGYLTTP SGTLQKYNPKTKAITIVNETQASDPKDPDRKNNISPNEKKTEKPTSDSKQKTNTNVWPEIKPLIPTIPAK
Sequences:
>Translated_230_residues MNWDSFKWRNYDYAIGRFMCIDPLAEKYSFQSPYNFSENRVIDSRELEGLEAYRLFRTEKEAANNWGQQYSGKSIRENKE FGSTIGKSIDAKGNVGYSYAPPAPGDNDGVTISDAPEGTTPTADIHAHGAYDSEYFNNDFSRGDKKGNDNTGLNGYLTTP SGTLQKYNPKTKAITIVNETQASDPKDPDRKNNISPNEKKTEKPTSDSKQKTNTNVWPEIKPLIPTIPAK >Mature_230_residues MNWDSFKWRNYDYAIGRFMCIDPLAEKYSFQSPYNFSENRVIDSRELEGLEAYRLFRTEKEAANNWGQQYSGKSIRENKE FGSTIGKSIDAKGNVGYSYAPPAPGDNDGVTISDAPEGTTPTADIHAHGAYDSEYFNNDFSRGDKKGNDNTGLNGYLTTP SGTLQKYNPKTKAITIVNETQASDPKDPDRKNNISPNEKKTEKPTSDSKQKTNTNVWPEIKPLIPTIPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25753; Mature: 25753
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWDSFKWRNYDYAIGRFMCIDPLAEKYSFQSPYNFSENRVIDSRELEGLEAYRLFRTEK CCCCCCEECCCCHHCCEEEEHHHHHHHHCCCCCCCCCCCCEECCHHHCCHHHHHHHHHHH EAANNWGQQYSGKSIRENKEFGSTIGKSIDAKGNVGYSYAPPAPGDNDGVTISDAPEGTT HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC PTADIHAHGAYDSEYFNNDFSRGDKKGNDNTGLNGYLTTPSGTLQKYNPKTKAITIVNET CCCEEEECCCCCHHHHCCCHHCCCCCCCCCCCCCEEEECCCCCCEECCCCCEEEEEEECC QASDPKDPDRKNNISPNEKKTEKPTSDSKQKTNTNVWPEIKPLIPTIPAK CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNWDSFKWRNYDYAIGRFMCIDPLAEKYSFQSPYNFSENRVIDSRELEGLEAYRLFRTEK CCCCCCEECCCCHHCCEEEEHHHHHHHHCCCCCCCCCCCCEECCHHHCCHHHHHHHHHHH EAANNWGQQYSGKSIRENKEFGSTIGKSIDAKGNVGYSYAPPAPGDNDGVTISDAPEGTT HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC PTADIHAHGAYDSEYFNNDFSRGDKKGNDNTGLNGYLTTPSGTLQKYNPKTKAITIVNET CCCEEEECCCCCHHHHCCCHHCCCCCCCCCCCCCEEEECCCCCCEECCCCCEEEEEEECC QASDPKDPDRKNNISPNEKKTEKPTSDSKQKTNTNVWPEIKPLIPTIPAK CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA