| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301256
Identifier: 146301256
GI number: 146301256
Start: 4188014
End: 4188919
Strand: Direct
Name: 146301256
Synonym: Fjoh_3514
Alternate gene names: NA
Gene position: 4188014-4188919 (Clockwise)
Preceding gene: 146301255
Following gene: 146301257
Centisome position: 68.69
GC content: 33.33
Gene sequence:
>906_bases TTGAAAACAAAAATTTTATTTTTCTTACTGGCTTGTGTTTCTTTAAACACATTTGCTCAGGAAGAAATTCCAGTACAAAA ATACGCTGCTCACAACAAAGGTAAATTCTTTGTTATGTGGGGCGGAAACAGAGAAAGTTACTCAAAATCTGATGTAAACT TTCGTGGTAAGGATTACAACTTTACAGTTGAAAATATGTCTGCTCATGACAAACCAAAAGGATGGCATGTAGATTATATT AATCCTGCAAATATGACTATTCCTCAGACCAATTTAAGACTTGGTTATTTCTTTAGTGATCATTACAGTGTAACAATTGG TGTTGACCACATGAAATATGTAATGGCACAGAATCAAATTGCAAATGTTAATGGAAATATCAATTTACCTGCAGATGATC CCGGCTCAATTTACAACGGTGAATACAATAACAGACCTGTAGATATGTCTTTAAATGGAGCTGTAGAAGGTGGTTATGAC AAAGGTGTAACTAATCCAAATGGTCCTGCTTTTTTAATGTACGAACATACAGATGGTTTAAACTACATTAATACTGAGGT TGCGAGATTTGATGATGTTTCTAAATGGTTTGGACTGCCAAATATTGATAAAGTTCAGATTAACTTAACTGAAGGATTAG GAGCTGGTATTTTATATCCAAAAACAAATACTACTCTTTTAGGTAAAGAACGTCATGATGACTTTCATGTTTCCGGATAC GGTGTTTCTGCAAAAGCGGGTCTAAATATTACTTTTTTCAAACATTTCTATGTTCAGGGAGAATTAAAAGGAGGATATAT CAACATGCAGGATATTAAAACCACAACAAGCAATGAAGATAAAGCTTCTCAGCATTTTACTTATTTTCAACGAATTATTG CTGTTGGAGGAATCTTTAGAATCTAA
Upstream 100 bases:
>100_bases GCTAATATGCTTCATTTAGACTATTTTGAAGGTTTAATGAACAAATTAGTGGCTATTAGAAAAACTGTAAATGCCTTTTA ATTTATAATACTTAAGTTCT
Downstream 100 bases:
>100_bases TTTCAGTTAGAAAATATATTAAAAATAGTTATCATTAATTTGGTAACTATTTTTTTTATTATTTACTTTGCAACTCAAAG TACTTTAATATTTATTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MKTKILFFLLACVSLNTFAQEEIPVQKYAAHNKGKFFVMWGGNRESYSKSDVNFRGKDYNFTVENMSAHDKPKGWHVDYI NPANMTIPQTNLRLGYFFSDHYSVTIGVDHMKYVMAQNQIANVNGNINLPADDPGSIYNGEYNNRPVDMSLNGAVEGGYD KGVTNPNGPAFLMYEHTDGLNYINTEVARFDDVSKWFGLPNIDKVQINLTEGLGAGILYPKTNTTLLGKERHDDFHVSGY GVSAKAGLNITFFKHFYVQGELKGGYINMQDIKTTTSNEDKASQHFTYFQRIIAVGGIFRI
Sequences:
>Translated_301_residues MKTKILFFLLACVSLNTFAQEEIPVQKYAAHNKGKFFVMWGGNRESYSKSDVNFRGKDYNFTVENMSAHDKPKGWHVDYI NPANMTIPQTNLRLGYFFSDHYSVTIGVDHMKYVMAQNQIANVNGNINLPADDPGSIYNGEYNNRPVDMSLNGAVEGGYD KGVTNPNGPAFLMYEHTDGLNYINTEVARFDDVSKWFGLPNIDKVQINLTEGLGAGILYPKTNTTLLGKERHDDFHVSGY GVSAKAGLNITFFKHFYVQGELKGGYINMQDIKTTTSNEDKASQHFTYFQRIIAVGGIFRI >Mature_301_residues MKTKILFFLLACVSLNTFAQEEIPVQKYAAHNKGKFFVMWGGNRESYSKSDVNFRGKDYNFTVENMSAHDKPKGWHVDYI NPANMTIPQTNLRLGYFFSDHYSVTIGVDHMKYVMAQNQIANVNGNINLPADDPGSIYNGEYNNRPVDMSLNGAVEGGYD KGVTNPNGPAFLMYEHTDGLNYINTEVARFDDVSKWFGLPNIDKVQINLTEGLGAGILYPKTNTTLLGKERHDDFHVSGY GVSAKAGLNITFFKHFYVQGELKGGYINMQDIKTTTSNEDKASQHFTYFQRIIAVGGIFRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33852; Mature: 33852
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKILFFLLACVSLNTFAQEEIPVQKYAAHNKGKFFVMWGGNRESYSKSDVNFRGKDYN CCHHHHHHHHHHHHHCHHHHHCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE FTVENMSAHDKPKGWHVDYINPANMTIPQTNLRLGYFFSDHYSVTIGVDHMKYVMAQNQI EEECCCCCCCCCCCEEEEEECCCCCEECCCCEEEEEEEECCEEEEEEHHHHEEEHHCCEE ANVNGNINLPADDPGSIYNGEYNNRPVDMSLNGAVEGGYDKGVTNPNGPAFLMYEHTDGL EECCCEEECCCCCCCCEECCCCCCCEEEEEECCCEECCCCCCCCCCCCCEEEEEEECCCC NYINTEVARFDDVSKWFGLPNIDKVQINLTEGLGAGILYPKTNTTLLGKERHDDFHVSGY CCCCCHHHHHCCHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCEEEECCCCCCEEEEEE GVSAKAGLNITFFKHFYVQGELKGGYINMQDIKTTTSNEDKASQHFTYFQRIIAVGGIFR CEEECCCCEEEEEEEEEEEEEECCCEEEHHHCEECCCCCCHHHHHHHHHHHHHHHCCEEC I C >Mature Secondary Structure MKTKILFFLLACVSLNTFAQEEIPVQKYAAHNKGKFFVMWGGNRESYSKSDVNFRGKDYN CCHHHHHHHHHHHHHCHHHHHCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE FTVENMSAHDKPKGWHVDYINPANMTIPQTNLRLGYFFSDHYSVTIGVDHMKYVMAQNQI EEECCCCCCCCCCCEEEEEECCCCCEECCCCEEEEEEEECCEEEEEEHHHHEEEHHCCEE ANVNGNINLPADDPGSIYNGEYNNRPVDMSLNGAVEGGYDKGVTNPNGPAFLMYEHTDGL EECCCEEECCCCCCCCEECCCCCCCEEEEEECCCEECCCCCCCCCCCCCEEEEEEECCCC NYINTEVARFDDVSKWFGLPNIDKVQINLTEGLGAGILYPKTNTTLLGKERHDDFHVSGY CCCCCHHHHHCCHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCEEEECCCCCCEEEEEE GVSAKAGLNITFFKHFYVQGELKGGYINMQDIKTTTSNEDKASQHFTYFQRIIAVGGIFR CEEECCCCEEEEEEEEEEEEEECCCEEEHHHCEECCCCCCHHHHHHHHHHHHHHHCCEEC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA