| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301233
Identifier: 146301233
GI number: 146301233
Start: 4168754
End: 4169149
Strand: Direct
Name: 146301233
Synonym: Fjoh_3491
Alternate gene names: NA
Gene position: 4168754-4169149 (Clockwise)
Preceding gene: 146301232
Following gene: 146301234
Centisome position: 68.38
GC content: 33.59
Gene sequence:
>396_bases ATGGATACAATATCAGCAAAAATAGATACACGTTTATATCGAACAGAAATCACATCTGCCAGCGGAAATGTTTTAATTTC TGATGAACCTCAGCAGCTGGGAGGCAAAAACTTAGGACTCAACCCAACAGAACTTTTGGCTTCATCTTTAGCCTCTTGCA CTCTGATTACTTTACGAATGTATATTAATCGTAAACAATGGAACGTAGAAGAAATCAATATAAAAATTGATTTTGAAAGA GATTCAGAGCGAAATTGTACCTCATTTACCAGAAAAATCGAAGTAATAGGAGAAATTGACGATACACAAAGACAAAGATT AGAAACGATTGCAAACAGCTGTCCAATTCATAAAACACTGACACATTCAATCGAAATTAAAACGACATTAATATAA
Upstream 100 bases:
>100_bases TCATCGAAAAAGCTAAAAAAGACTGGACAGAACAAACTTTCCCAAAAGTTCCGGGAGAAACTGAATTTGTTCCATTACCT GAACCAAGAATTAAATAATT
Downstream 100 bases:
>100_bases TTATAATGGAAATTCAACAAATAAACGATACAAGAAGAGGCTATTTTGAAGCAATTGAAGACGGAAAAGAAGCTGGAAAA ATGACTTACACTTGGGCAGG
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; Hydrolase; Osmc Family Protein; OsmC-Like Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; Stress-Induced Protein OsmC; OsmC-Like Protein/ Redox Protein; Hydroperoxide Resistance Protein OsmC-Like Protein; OsmC-Like Protein Superfamily Protein; Osmotically Inducible Protein; Regulator Of Disulfide Bond Formation Redox Protein
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MDTISAKIDTRLYRTEITSASGNVLISDEPQQLGGKNLGLNPTELLASSLASCTLITLRMYINRKQWNVEEINIKIDFER DSERNCTSFTRKIEVIGEIDDTQRQRLETIANSCPIHKTLTHSIEIKTTLI
Sequences:
>Translated_131_residues MDTISAKIDTRLYRTEITSASGNVLISDEPQQLGGKNLGLNPTELLASSLASCTLITLRMYINRKQWNVEEINIKIDFER DSERNCTSFTRKIEVIGEIDDTQRQRLETIANSCPIHKTLTHSIEIKTTLI >Mature_131_residues MDTISAKIDTRLYRTEITSASGNVLISDEPQQLGGKNLGLNPTELLASSLASCTLITLRMYINRKQWNVEEINIKIDFER DSERNCTSFTRKIEVIGEIDDTQRQRLETIANSCPIHKTLTHSIEIKTTLI
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14852; Mature: 14852
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTISAKIDTRLYRTEITSASGNVLISDEPQQLGGKNLGLNPTELLASSLASCTLITLRM CCCCCCHHHHEEEEEEECCCCCCEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH YINRKQWNVEEINIKIDFERDSERNCTSFTRKIEVIGEIDDTQRQRLETIANSCPIHKTL HHCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCHHH THSIEIKTTLI CCEEEEEEEEC >Mature Secondary Structure MDTISAKIDTRLYRTEITSASGNVLISDEPQQLGGKNLGLNPTELLASSLASCTLITLRM CCCCCCHHHHEEEEEEECCCCCCEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH YINRKQWNVEEINIKIDFERDSERNCTSFTRKIEVIGEIDDTQRQRLETIANSCPIHKTL HHCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCHHH THSIEIKTTLI CCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA