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The map label for this gene is yfiO [C]

Identifier: 146301211

GI number: 146301211

Start: 4135770

End: 4136564

Strand: Reverse

Name: yfiO [C]

Synonym: Fjoh_3469

Alternate gene names: 146301211

Gene position: 4136564-4135770 (Counterclockwise)

Preceding gene: 146301212

Following gene: 146301210

Centisome position: 67.85

GC content: 32.83

Gene sequence:

>795_bases
ATGAAAAAAATAGTATCTCTATTAATTGTTGCTGCCCTTTTTTGTTCTTGTAGTGAGTATCAAAAAGCTCTAAAAAATGA
AGATGTCGCAGCAAAATTCGAAGTAGCGACAAAAATGTATGATGCTGGTAAATACAATAAGGCGATCCGCCTTTTTGAAC
AACTTGCACCTACTTATAGAGGTAAGCCTCAGGCGGAAAAGCTTTTTTATATGTTTTCTCAGTCTTATTACAAGACAAAA
CAATATTATTTAGCAGGTTATCAGTTTGAAAGTTTTGTTTCTGGATATCCGCGAAGCGAAAAAGTACAGGAAGCAGCATT
TTTAGGAGCTTACAGCTACTCTAAATTAGCACCTGTTTACAGTTTAGATCAGGCAGATACTGTAAAAGCCTTAGATAAAT
TACAGGCTTTTATTGATAACTATCCAAATTCAGAATATTTAGCTCAGGCAAATGAGTCTGTTAAGATTTTGAACGGAAAA
TTAGAGAAAAAAGCATACGAGAATGCTAAAGGATATAACACAATTTCAGATTACAAATCAGCTTTAGTTGCATTTGATAA
TTTTATTGCTGATTTTCCCGGAACACCTCTAAAAGAAGACGCTTTATTTTATAAATATGATTCAGCATACCAATTAGCCA
TAAACAGTGTACCATCAAAAATGGAAGAACGTTTACATGTAGCGCAGACAGCTTATGCTAATTTGATGAAATATAAAAGC
GATACTAAGTACAAAGAAAAGGCAGATCAAATGAATGCCAGAGTTGAAACAGATTTACAAAAATTTACTAAATAA

Upstream 100 bases:

>100_bases
ATTTTGCAGTCGCTAAATTAATACCTAAATTTGCCACCGAAACTTCGGTGTGGTTTTGCTTTGGCATAATGTCTAAAGAA
ATCATAATAAAAGTAAAAAA

Downstream 100 bases:

>100_bases
ATAAAGTCATGGATTTAAAAAAGACGAATGCTCCTGTTAACACAATAACTTACAATAAAACAGTTATTGAAGAGCCAACA
GGAAATGTGTATGAGGCAAT

Product: DNA uptake lipoprotein-like protein

Products: NA

Alternate protein names: Outer Membrane Assembly Lipoprotein YfiO; TPR Repeat-Containing Protein; Outer Membrane Assembly Lipoprotein Yfio; Lipoprotein Protein; Nuclear Transition Protein; Tetratricopeptide TPR_2 Repeat Protein; DNA Uptake Lipoprotein; DNA Uptake Lipoprotein-Like Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKKIVSLLIVAALFCSCSEYQKALKNEDVAAKFEVATKMYDAGKYNKAIRLFEQLAPTYRGKPQAEKLFYMFSQSYYKTK
QYYLAGYQFESFVSGYPRSEKVQEAAFLGAYSYSKLAPVYSLDQADTVKALDKLQAFIDNYPNSEYLAQANESVKILNGK
LEKKAYENAKGYNTISDYKSALVAFDNFIADFPGTPLKEDALFYKYDSAYQLAINSVPSKMEERLHVAQTAYANLMKYKS
DTKYKEKADQMNARVETDLQKFTK

Sequences:

>Translated_264_residues
MKKIVSLLIVAALFCSCSEYQKALKNEDVAAKFEVATKMYDAGKYNKAIRLFEQLAPTYRGKPQAEKLFYMFSQSYYKTK
QYYLAGYQFESFVSGYPRSEKVQEAAFLGAYSYSKLAPVYSLDQADTVKALDKLQAFIDNYPNSEYLAQANESVKILNGK
LEKKAYENAKGYNTISDYKSALVAFDNFIADFPGTPLKEDALFYKYDSAYQLAINSVPSKMEERLHVAQTAYANLMKYKS
DTKYKEKADQMNARVETDLQKFTK
>Mature_264_residues
MKKIVSLLIVAALFCSCSEYQKALKNEDVAAKFEVATKMYDAGKYNKAIRLFEQLAPTYRGKPQAEKLFYMFSQSYYKTK
QYYLAGYQFESFVSGYPRSEKVQEAAFLGAYSYSKLAPVYSLDQADTVKALDKLQAFIDNYPNSEYLAQANESVKILNGK
LEKKAYENAKGYNTISDYKSALVAFDNFIADFPGTPLKEDALFYKYDSAYQLAINSVPSKMEERLHVAQTAYANLMKYKS
DTKYKEKADQMNARVETDLQKFTK

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30182; Mature: 30182

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA