| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301184
Identifier: 146301184
GI number: 146301184
Start: 4110222
End: 4110860
Strand: Reverse
Name: 146301184
Synonym: Fjoh_3442
Alternate gene names: NA
Gene position: 4110860-4110222 (Counterclockwise)
Preceding gene: 146301188
Following gene: 146301183
Centisome position: 67.43
GC content: 36.62
Gene sequence:
>639_bases ATGAAAAAAATTGTAACATTAGTCAGTGTTGTGCTAATGGGCTTAACCGCTAAGGCTCAGGATTCAGCTCAAGGACTAAA AGGAGCTTGGTTTGCAACTTCTCAATTCGGTTATCAGCAGACAAAAACTGCAGACGAAAAAAACACGAGTTTATCTGTAC TTCCAATCGTTGGTACATTTGTAACTCCATCTGTAGCCGTTGGAGCAGGATTCGGATTAATTAACATCAAAGCCGAGTCA AATGCAGGCACAGCTGCAAAAACAGATTTAATTGTTATTCAGCCTTTAGTTAGAAAATATTGGAATGTAGCTGGTTCATT GTACTTCTTCGGACAGGCAGCGATACCAGTTATTACCGGAAAAGAAAAAGAAAGCGAGTTAAAAGTTAATCAGGTAGGAT TATCAGTATCAGGAGGTTTTGATTATTTCATTACAAAAAACTTCTCTGTAGAGTTCTCTTACGATTTGGCTAATTTTACT TCTACGACTCTAGAGCCTAAAAATGGAGAAAAAACGACTGTTACAAATTTTGGATTGGCGCATGTTGCAAATGTTGACCC ATTTTACAATACAGCTTTAGCAGGAAGTAATCCAAATTTAACTTCTCCGCTTTCTTTTGGATTTAAATTCATATTCTAA
Upstream 100 bases:
>100_bases TCAAATATAATTAAAGATTTTTTTTAATCTATGATTTTAATCATCCTTCTCAAAAATGCTTACAAGTAAGTTTGTCCTGT AATTCAAAAACAAATTTATA
Downstream 100 bases:
>100_bases TTTAGCGGATTGTTTTAGGTCAATTCCGTAATTTTGCAAAAAAGACCGTGCTTTTTTAAGTACGGTCTTTTAGTATTATT TAATATATAAATTAAAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MKKIVTLVSVVLMGLTAKAQDSAQGLKGAWFATSQFGYQQTKTADEKNTSLSVLPIVGTFVTPSVAVGAGFGLINIKAES NAGTAAKTDLIVIQPLVRKYWNVAGSLYFFGQAAIPVITGKEKESELKVNQVGLSVSGGFDYFITKNFSVEFSYDLANFT STTLEPKNGEKTTVTNFGLAHVANVDPFYNTALAGSNPNLTSPLSFGFKFIF
Sequences:
>Translated_212_residues MKKIVTLVSVVLMGLTAKAQDSAQGLKGAWFATSQFGYQQTKTADEKNTSLSVLPIVGTFVTPSVAVGAGFGLINIKAES NAGTAAKTDLIVIQPLVRKYWNVAGSLYFFGQAAIPVITGKEKESELKVNQVGLSVSGGFDYFITKNFSVEFSYDLANFT STTLEPKNGEKTTVTNFGLAHVANVDPFYNTALAGSNPNLTSPLSFGFKFIF >Mature_212_residues MKKIVTLVSVVLMGLTAKAQDSAQGLKGAWFATSQFGYQQTKTADEKNTSLSVLPIVGTFVTPSVAVGAGFGLINIKAES NAGTAAKTDLIVIQPLVRKYWNVAGSLYFFGQAAIPVITGKEKESELKVNQVGLSVSGGFDYFITKNFSVEFSYDLANFT STTLEPKNGEKTTVTNFGLAHVANVDPFYNTALAGSNPNLTSPLSFGFKFIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22646; Mature: 22646
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIVTLVSVVLMGLTAKAQDSAQGLKGAWFATSQFGYQQTKTADEKNTSLSVLPIVGTF CHHHHHHHHHHHHCCCCCCCCHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCC VTPSVAVGAGFGLINIKAESNAGTAAKTDLIVIQPLVRKYWNVAGSLYFFGQAAIPVITG CCCCEEHCCCCEEEEEEECCCCCCCCCCCEEEECHHHHHHHHHHCEEEEECCEEEEEEEC KEKESELKVNQVGLSVSGGFDYFITKNFSVEFSYDLANFTSTTLEPKNGEKTTVTNFGLA CCCCCCEEEEEEEEEEECCEEEEEEECEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEE HVANVDPFYNTALAGSNPNLTSPLSFGFKFIF EECCCCCHHHHEECCCCCCCCCCHHCCEEEEC >Mature Secondary Structure MKKIVTLVSVVLMGLTAKAQDSAQGLKGAWFATSQFGYQQTKTADEKNTSLSVLPIVGTF CHHHHHHHHHHHHCCCCCCCCHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCC VTPSVAVGAGFGLINIKAESNAGTAAKTDLIVIQPLVRKYWNVAGSLYFFGQAAIPVITG CCCCEEHCCCCEEEEEEECCCCCCCCCCCEEEECHHHHHHHHHHCEEEEECCEEEEEEEC KEKESELKVNQVGLSVSGGFDYFITKNFSVEFSYDLANFTSTTLEPKNGEKTTVTNFGLA CCCCCCEEEEEEEEEEECCEEEEEEECEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEE HVANVDPFYNTALAGSNPNLTSPLSFGFKFIF EECCCCCHHHHEECCCCCCCCCCHHCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA