Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301162

Identifier: 146301162

GI number: 146301162

Start: 4085957

End: 4086994

Strand: Reverse

Name: 146301162

Synonym: Fjoh_3420

Alternate gene names: NA

Gene position: 4086994-4085957 (Counterclockwise)

Preceding gene: 146301163

Following gene: 146301161

Centisome position: 67.03

GC content: 33.04

Gene sequence:

>1038_bases
ATGAAAAAAATTACTCTAGCATTATTATTAAGTTCTTTTACAGTTTTATTTGCACAGGCTCCGCAGAAGATGAGTTATCA
ATCTGTTATTCGTAAAGCAGACGGAACATTGGCAGCGAGTACATTAGTGAATATAAAAACCAGTATTTTATTAGGTTCAG
CAACAGGAACGGCTTCTTATGTTGAAACACAAACTACCACCACAAATACTAATGGATTAGCAACAATAGAAATTGGAGGC
GGAACACCTGCTTCTGGAACTTTTGCCAATATCAATTGGGGAGCAGGATCACATTTTATTAAAACCGAAATAGATCCAAC
AGGAGGGAGTAATTTTACTATAAGCGGCACAAGCCAGCTTTTAAGTGTACCTTATGCTTTATATGCAGGCTCTGCTCAAA
AACAAGGTAAAACAAGTATTGTATTAACAGGTGATATTACAGATGCACAAGCTGTTACACAATTACAGAATGAGTTAGGA
CCAAATACAGAAAATATTTATGTTTTAGGGACGACAAACCTTACAAATCTGGATTTAAGTGCTGTAAAGAATGTAGTTAA
TTTATCTGTAATGGAAAATTTAAAATTAGCTGCAATAAATTTTAATAATCTTAGTGAAATATATAATGAGTTGAAGATAG
AAAATAACGATAAATTAGCAGCATTGTTATTTCCTGCTTTAAAGGCGGTACATGGATTCGATACCTATGTTTCTAGAAAT
TTATCATTAGTGTCAATTTCCTGTCCTGTATTAACAAAATCAAAAAGCATCTATTTTCGAAGAAATCCTCTTTTAAGTTC
TATAGATTTGCCTTTATTGGTTAAAGTTCATAATGGTGAAGCAAGTCTTAATTTTGATGAAAATGCACTTCCAAGTTCTC
AGGTTAATTTAATTTTAAGCAGATTATTAAATATTTCTCCAGCTTCAGGAACTTATATTCAACTGCAGTATCAAAACCCT
CCTGCACCGCCTACAGGACAAGGTCTTATCGATAAAACAACTTTAATAAACAGAGGTAACAGCGTTGCAACAGATTAA

Upstream 100 bases:

>100_bases
TAAATCAAGGGGTTTATTTTTTGGTCATAAATAAGAATTCAAAAAATATTAAAACTTTTAAAATAATAAAAAAATAACAT
TTTAAACCGCAGAAAAATAT

Downstream 100 bases:

>100_bases
AGATTTGTTTTAGAATAAATATATCTAAAACACCAGCAGAAATGCTGGCGTTTTTTTGTTTATAACCGTGAATAATGAAA
CTTTTTTCAAAAGTCATATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MKKITLALLLSSFTVLFAQAPQKMSYQSVIRKADGTLAASTLVNIKTSILLGSATGTASYVETQTTTTNTNGLATIEIGG
GTPASGTFANINWGAGSHFIKTEIDPTGGSNFTISGTSQLLSVPYALYAGSAQKQGKTSIVLTGDITDAQAVTQLQNELG
PNTENIYVLGTTNLTNLDLSAVKNVVNLSVMENLKLAAINFNNLSEIYNELKIENNDKLAALLFPALKAVHGFDTYVSRN
LSLVSISCPVLTKSKSIYFRRNPLLSSIDLPLLVKVHNGEASLNFDENALPSSQVNLILSRLLNISPASGTYIQLQYQNP
PAPPTGQGLIDKTTLINRGNSVATD

Sequences:

>Translated_345_residues
MKKITLALLLSSFTVLFAQAPQKMSYQSVIRKADGTLAASTLVNIKTSILLGSATGTASYVETQTTTTNTNGLATIEIGG
GTPASGTFANINWGAGSHFIKTEIDPTGGSNFTISGTSQLLSVPYALYAGSAQKQGKTSIVLTGDITDAQAVTQLQNELG
PNTENIYVLGTTNLTNLDLSAVKNVVNLSVMENLKLAAINFNNLSEIYNELKIENNDKLAALLFPALKAVHGFDTYVSRN
LSLVSISCPVLTKSKSIYFRRNPLLSSIDLPLLVKVHNGEASLNFDENALPSSQVNLILSRLLNISPASGTYIQLQYQNP
PAPPTGQGLIDKTTLINRGNSVATD
>Mature_345_residues
MKKITLALLLSSFTVLFAQAPQKMSYQSVIRKADGTLAASTLVNIKTSILLGSATGTASYVETQTTTTNTNGLATIEIGG
GTPASGTFANINWGAGSHFIKTEIDPTGGSNFTISGTSQLLSVPYALYAGSAQKQGKTSIVLTGDITDAQAVTQLQNELG
PNTENIYVLGTTNLTNLDLSAVKNVVNLSVMENLKLAAINFNNLSEIYNELKIENNDKLAALLFPALKAVHGFDTYVSRN
LSLVSISCPVLTKSKSIYFRRNPLLSSIDLPLLVKVHNGEASLNFDENALPSSQVNLILSRLLNISPASGTYIQLQYQNP
PAPPTGQGLIDKTTLINRGNSVATD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36654; Mature: 36654

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITLALLLSSFTVLFAQAPQKMSYQSVIRKADGTLAASTLVNIKTSILLGSATGTASY
CCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEHHHEEEEEEEEEECCCCCCEE
VETQTTTTNTNGLATIEIGGGTPASGTFANINWGAGSHFIKTEIDPTGGSNFTISGTSQL
EEEECEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCHHH
LSVPYALYAGSAQKQGKTSIVLTGDITDAQAVTQLQNELGPNTENIYVLGTTNLTNLDLS
HHCCHHEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHH
AVKNVVNLSVMENLKLAAINFNNLSEIYNELKIENNDKLAALLFPALKAVHGFDTYVSRN
HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHEECCCCCCHHHHHHHHHHHHCHHHHHHCC
LSLVSISCPVLTKSKSIYFRRNPLLSSIDLPLLVKVHNGEASLNFDENALPSSQVNLILS
EEEEEEECCEEECCCEEEEECCCCCCCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHHH
RLLNISPASGTYIQLQYQNPPAPPTGQGLIDKTTLINRGNSVATD
HHHCCCCCCCCEEEEEECCCCCCCCCCCCEECCEEEECCCCCCCC
>Mature Secondary Structure
MKKITLALLLSSFTVLFAQAPQKMSYQSVIRKADGTLAASTLVNIKTSILLGSATGTASY
CCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEHHHEEEEEEEEEECCCCCCEE
VETQTTTTNTNGLATIEIGGGTPASGTFANINWGAGSHFIKTEIDPTGGSNFTISGTSQL
EEEECEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCHHH
LSVPYALYAGSAQKQGKTSIVLTGDITDAQAVTQLQNELGPNTENIYVLGTTNLTNLDLS
HHCCHHEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHH
AVKNVVNLSVMENLKLAAINFNNLSEIYNELKIENNDKLAALLFPALKAVHGFDTYVSRN
HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHEECCCCCCHHHHHHHHHHHHCHHHHHHCC
LSLVSISCPVLTKSKSIYFRRNPLLSSIDLPLLVKVHNGEASLNFDENALPSSQVNLILS
EEEEEEECCEEECCCEEEEECCCCCCCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHHH
RLLNISPASGTYIQLQYQNPPAPPTGQGLIDKTTLINRGNSVATD
HHHCCCCCCCCEEEEEECCCCCCCCCCCCEECCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA