| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301153
Identifier: 146301153
GI number: 146301153
Start: 4074955
End: 4076238
Strand: Direct
Name: 146301153
Synonym: Fjoh_3411
Alternate gene names: NA
Gene position: 4074955-4076238 (Clockwise)
Preceding gene: 146301146
Following gene: 146301156
Centisome position: 66.84
GC content: 37.69
Gene sequence:
>1284_bases ATGCCAATAACCGCCAACGATACAAATAGAAAATCATGGTTAGAAGTACCAGAAAATAGTGACTTCCCTATTCAAAATAT TCCTTTCGGCGTGTTTCTTACCAAAGAAAATGTCGTTACAGTGGGAACTAGAATTGGCGATTACGCCATAGATTTAGGGG CTTTACAACAATTAAACTATTTTGAAGGAATAGAATTAACCGATGATATGTTTATGCAGGACACGCTGAATGATTTTATT TCTGACGGAAAAAAAACATGGCGTTTGGTGCGAAATCGTATCGCTGATATTTTCGACGAGACTAATCCACAACTAAGAGA TTCAACAAAACACCGAGATATTGTTATATTTAAGATTGAAGATGTAGAAATGCAGCTTCCGGTTTTAATTGGTGATTATA CAGATTTTTATTCAAGCAGAGAACATGCTACAAACGTAGGTAAAATGTTCCGCGACCCAGAAAATGCTTTACTGCCAAAC TGGCTTCATATTCCGGTTGGGTACCATGGAAGAAGTTCTACAATTGTACCATCTGGAATTCCGGTTCACAGGCCAATGGG ACAAACATTACCTGCGGGTCATGATACTCCTGTTTTTGGAGCTTCGCGTTTAGTAGATTTCGAATTAGAAACGGCTTTCA TTACTACTGATGTGAATGTAATGGGAGAAAACATCTCAACTTACGAAGCAGAAGACTATATTTTTGGTATGGTTTTACTA AATGACTGGAGCGCGCGCGATATGCAAAAATGGGAATATGTGCCTCTTGGGCCATTCTTAGCAAAAAACTTTGCAACTTC AATTTCTCCGTGGATTGTAACTATGGATGCTTTAGAACCTTTTAGAACCAAAGGCCCAAAACAAGATCCGTCTCCGCTTC CCTACTTACAAACAAAAGGAAAAAAAGCTTTTGATATTCATTTAGAAGTTTCTTTAAAACCAGAGAATCAGGAAGAAACT GTGATTTCAAAATCCAACTTTAAATACATGTATTGGTCAATGGCACAGCAATTAACGCACCATACTTCTAATGGATGTCG TGTTAATTCTGGAGACATGATGGGTTCTGGAACTATTTCTGGTCCAACTCCTGATAGTTTTGGTTCTATGCTGGAATTAA CTTGGGGAGGAAAAAATCCGTTGAAACTAAATGACGGAAGTGAACGTAAATTTATTGAAGATAATGACACTGTTATTATT CGTGGTTTCTGTGAAAACAACGAAGTAAGAATTGGTTTTGGTGAAGTTGCCAGCCAGCTTTTACCTCCATTTACAAGACA ATGA
Upstream 100 bases:
>100_bases TTTCGTTAATTTCCTGCAAAAATACAAAAAAACGTTTGTGATACTGGCAGATTATGATATATTTGACATATAATTTTTCA ACAAATAATTAACATCAAAC
Downstream 100 bases:
>100_bases AGAGCAGAGCAATCTGAAGATATATAGAAATAAAAAAAACCTTGGAAAGCCAAGGTTTTTTTATGCTTTATATTTAATCT TGAAAAAATTGAAAAAAAGC
Product: fumarylacetoacetase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Hydrolase; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MPITANDTNRKSWLEVPENSDFPIQNIPFGVFLTKENVVTVGTRIGDYAIDLGALQQLNYFEGIELTDDMFMQDTLNDFI SDGKKTWRLVRNRIADIFDETNPQLRDSTKHRDIVIFKIEDVEMQLPVLIGDYTDFYSSREHATNVGKMFRDPENALLPN WLHIPVGYHGRSSTIVPSGIPVHRPMGQTLPAGHDTPVFGASRLVDFELETAFITTDVNVMGENISTYEAEDYIFGMVLL NDWSARDMQKWEYVPLGPFLAKNFATSISPWIVTMDALEPFRTKGPKQDPSPLPYLQTKGKKAFDIHLEVSLKPENQEET VISKSNFKYMYWSMAQQLTHHTSNGCRVNSGDMMGSGTISGPTPDSFGSMLELTWGGKNPLKLNDGSERKFIEDNDTVII RGFCENNEVRIGFGEVASQLLPPFTRQ
Sequences:
>Translated_427_residues MPITANDTNRKSWLEVPENSDFPIQNIPFGVFLTKENVVTVGTRIGDYAIDLGALQQLNYFEGIELTDDMFMQDTLNDFI SDGKKTWRLVRNRIADIFDETNPQLRDSTKHRDIVIFKIEDVEMQLPVLIGDYTDFYSSREHATNVGKMFRDPENALLPN WLHIPVGYHGRSSTIVPSGIPVHRPMGQTLPAGHDTPVFGASRLVDFELETAFITTDVNVMGENISTYEAEDYIFGMVLL NDWSARDMQKWEYVPLGPFLAKNFATSISPWIVTMDALEPFRTKGPKQDPSPLPYLQTKGKKAFDIHLEVSLKPENQEET VISKSNFKYMYWSMAQQLTHHTSNGCRVNSGDMMGSGTISGPTPDSFGSMLELTWGGKNPLKLNDGSERKFIEDNDTVII RGFCENNEVRIGFGEVASQLLPPFTRQ >Mature_426_residues PITANDTNRKSWLEVPENSDFPIQNIPFGVFLTKENVVTVGTRIGDYAIDLGALQQLNYFEGIELTDDMFMQDTLNDFIS DGKKTWRLVRNRIADIFDETNPQLRDSTKHRDIVIFKIEDVEMQLPVLIGDYTDFYSSREHATNVGKMFRDPENALLPNW LHIPVGYHGRSSTIVPSGIPVHRPMGQTLPAGHDTPVFGASRLVDFELETAFITTDVNVMGENISTYEAEDYIFGMVLLN DWSARDMQKWEYVPLGPFLAKNFATSISPWIVTMDALEPFRTKGPKQDPSPLPYLQTKGKKAFDIHLEVSLKPENQEETV ISKSNFKYMYWSMAQQLTHHTSNGCRVNSGDMMGSGTISGPTPDSFGSMLELTWGGKNPLKLNDGSERKFIEDNDTVIIR GFCENNEVRIGFGEVASQLLPPFTRQ
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=413, Percent_Identity=53.0266343825666, Blast_Score=460, Evalue=1e-129, Organism=Caenorhabditis elegans, GI17568863, Length=418, Percent_Identity=50.2392344497608, Blast_Score=418, Evalue=1e-117, Organism=Drosophila melanogaster, GI24657182, Length=414, Percent_Identity=51.4492753623188, Blast_Score=431, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 48265; Mature: 48134
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPITANDTNRKSWLEVPENSDFPIQNIPFGVFLTKENVVTVGTRIGDYAIDLGALQQLNY CCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCCEEECHHHHHHCCH FEGIELTDDMFMQDTLNDFISDGKKTWRLVRNRIADIFDETNPQLRDSTKHRDIVIFKIE HCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEEEEE DVEMQLPVLIGDYTDFYSSREHATNVGKMFRDPENALLPNWLHIPVGYHGRSSTIVPSGI CCEEEECEEEECHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCC PVHRPMGQTLPAGHDTPVFGASRLVDFELETAFITTDVNVMGENISTYEAEDYIFGMVLL CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEHEEECCCCCCEECCCEEEEEEEE NDWSARDMQKWEYVPLGPFLAKNFATSISPWIVTMDALEPFRTKGPKQDPSPLPYLQTKG CCCCCCCHHCCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCCHHHCCC KKAFDIHLEVSLKPENQEETVISKSNFKYMYWSMAQQLTHHTSNGCRVNSGDMMGSGTIS CEEEEEEEEEEECCCCCCCEEEECCCCEEEHHHHHHHHHHCCCCCCEECCCCCCCCCCCC GPTPDSFGSMLELTWGGKNPLKLNDGSERKFIEDNDTVIIRGFCENNEVRIGFGEVASQL CCCCCCCCCEEEEEECCCCCEEECCCCCCCEECCCCEEEEEEECCCCCEEEEHHHHHHHH LPPFTRQ CCCCCCC >Mature Secondary Structure PITANDTNRKSWLEVPENSDFPIQNIPFGVFLTKENVVTVGTRIGDYAIDLGALQQLNY CCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCCEEECHHHHHHCCH FEGIELTDDMFMQDTLNDFISDGKKTWRLVRNRIADIFDETNPQLRDSTKHRDIVIFKIE HCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEEEEE DVEMQLPVLIGDYTDFYSSREHATNVGKMFRDPENALLPNWLHIPVGYHGRSSTIVPSGI CCEEEECEEEECHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCC PVHRPMGQTLPAGHDTPVFGASRLVDFELETAFITTDVNVMGENISTYEAEDYIFGMVLL CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEHEEECCCCCCEECCCEEEEEEEE NDWSARDMQKWEYVPLGPFLAKNFATSISPWIVTMDALEPFRTKGPKQDPSPLPYLQTKG CCCCCCCHHCCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCCHHHCCC KKAFDIHLEVSLKPENQEETVISKSNFKYMYWSMAQQLTHHTSNGCRVNSGDMMGSGTIS CEEEEEEEEEEECCCCCCCEEEECCCCEEEHHHHHHHHHHCCCCCCEECCCCCCCCCCCC GPTPDSFGSMLELTWGGKNPLKLNDGSERKFIEDNDTVIIRGFCENNEVRIGFGEVASQL CCCCCCCCCEEEEEECCCCCEEECCCCCCCEECCCCEEEEEEECCCCCEEEEHHHHHHHH LPPFTRQ CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA