Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301144

Identifier: 146301144

GI number: 146301144

Start: 4065347

End: 4066681

Strand: Reverse

Name: 146301144

Synonym: Fjoh_3402

Alternate gene names: NA

Gene position: 4066681-4065347 (Counterclockwise)

Preceding gene: 146301145

Following gene: 146301143

Centisome position: 66.7

GC content: 33.18

Gene sequence:

>1335_bases
ATGAATTATATTAACAAGAGGTTTGAATTTGTCTTAATAAAAATTAAAATTTTTTGGAGAATGAAATTCTTAAAGAATAT
AAATTTTCAGCATAAATTTAAAACAGCAGTTCTGCTATCGATTACACCTTTATTTTTAACTGCACAAATTAAAACAAACC
CGGAAGAAAGAGAAATATGTCCGCCCAAAACGATCTTTGAAGTCTTTAAAAAGAAAGATTCAGTTTTAGAAATCAAACCA
GCAAAAAACAACTTTTTTCTCGTAATTCCTGCAATAGGATCACAGCCCGCAACCGGATTCTTTTTTGGTGCCGTAGCACA
ATATACATTTAAAGGAAAACAAGAATCAGATAAATATTCTGTAGCTAATCTTGGAATTATTTATACCTTAAAAAAGCAGT
GGATGATTAATGTAAAAAATAATATCCTGCTTAAAAACAACCGAATATTTTTAAGCGGAGATTATAGACTTTATATTTTT
TCACAACCCAATTATGGTTTAGGAACCGATATAATTCCGCCTCGTCGGGATCGTGATCCAGGTTTTAGTATTGATTCTCT
GGCTCAGGCAATGGATTATAATTATTTCAAGTTTCACCAAACCGTTTCTTTTGAAGTTAGGAAGAATTTTTATGTTGGCG
GCGGTATCAATATCGATTGGTATACAGATATAAAAGATAAAGAATTAGATATTGAAAACGGAAATTTAACCTATCATTAC
AATTACAGCCAAAAACACGGTTTTGATAATTTAGAATATTTTCTAACAGGTGTAAGTTTTAATCTCGTTTACGATTCTAG
GGACAATCAGGTAAATTCTTCACGAGGCTGGTTTGCCAATATTAATTATAGATTTAATCCTGTATTGTTCGATAATCAAA
AATACAGCAATATTTTATATGCAGAATATCGAAATTTTATTCCGGTTTCGCCAAAAAACGATCGATATATTCTCGGTATT
TGGGCTTATGGCCAGTTTGTAACCAGAGGTGAAGTTCCGTATTTAAATTTGCCTGCCATTGGCTGGGATCAGCGGAGCAG
GAGCGGTGAAGGTTACACGCAGGGATTATTTAGAGGAAACGGTCTCGTTTATCTTTCAACAGAATTTAGATTTCCTCTTA
TATGCAATCAAATGCTGAGCGGTACAGTTTTTACCAATTTTGTAACAGCCAGCAATGCAGATAATAATATCGGACTTTTT
CATTCTATTCAGCCCGCAGCAGGTGTTGGACTGAGGTTGTTAATAGATAAAAAAACACGAACAAATCTTGTAGCTGATTA
CGCCTGGGGAAATAATTCTAAAGGATTTTATCTCAATGCAGGAGAAGTTTTTTAA

Upstream 100 bases:

>100_bases
AACAAAATAATATTGTTATAAAAAATATAATAACAAGCCGTCGGTAAATCGACGGCTTTTTTTGTTTTATAGGTAAAAGT
TATTGTGTAAAGTCTTGAAA

Downstream 100 bases:

>100_bases
TTGTTTTGTTTGTTAACTATTTGATTTTGTGAAAATTATGATTGTAAAATGTTAAAAATTTAGAAGAAAAACCTTAAATT
TGATAACCATTTAACTTTCA

Product: surface antigen (D15)

Products: NA

Alternate protein names: Surface Antigen; OMP85 Family Outer Membrane Protein

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MNYINKRFEFVLIKIKIFWRMKFLKNINFQHKFKTAVLLSITPLFLTAQIKTNPEEREICPPKTIFEVFKKKDSVLEIKP
AKNNFFLVIPAIGSQPATGFFFGAVAQYTFKGKQESDKYSVANLGIIYTLKKQWMINVKNNILLKNNRIFLSGDYRLYIF
SQPNYGLGTDIIPPRRDRDPGFSIDSLAQAMDYNYFKFHQTVSFEVRKNFYVGGGINIDWYTDIKDKELDIENGNLTYHY
NYSQKHGFDNLEYFLTGVSFNLVYDSRDNQVNSSRGWFANINYRFNPVLFDNQKYSNILYAEYRNFIPVSPKNDRYILGI
WAYGQFVTRGEVPYLNLPAIGWDQRSRSGEGYTQGLFRGNGLVYLSTEFRFPLICNQMLSGTVFTNFVTASNADNNIGLF
HSIQPAAGVGLRLLIDKKTRTNLVADYAWGNNSKGFYLNAGEVF

Sequences:

>Translated_444_residues
MNYINKRFEFVLIKIKIFWRMKFLKNINFQHKFKTAVLLSITPLFLTAQIKTNPEEREICPPKTIFEVFKKKDSVLEIKP
AKNNFFLVIPAIGSQPATGFFFGAVAQYTFKGKQESDKYSVANLGIIYTLKKQWMINVKNNILLKNNRIFLSGDYRLYIF
SQPNYGLGTDIIPPRRDRDPGFSIDSLAQAMDYNYFKFHQTVSFEVRKNFYVGGGINIDWYTDIKDKELDIENGNLTYHY
NYSQKHGFDNLEYFLTGVSFNLVYDSRDNQVNSSRGWFANINYRFNPVLFDNQKYSNILYAEYRNFIPVSPKNDRYILGI
WAYGQFVTRGEVPYLNLPAIGWDQRSRSGEGYTQGLFRGNGLVYLSTEFRFPLICNQMLSGTVFTNFVTASNADNNIGLF
HSIQPAAGVGLRLLIDKKTRTNLVADYAWGNNSKGFYLNAGEVF
>Mature_444_residues
MNYINKRFEFVLIKIKIFWRMKFLKNINFQHKFKTAVLLSITPLFLTAQIKTNPEEREICPPKTIFEVFKKKDSVLEIKP
AKNNFFLVIPAIGSQPATGFFFGAVAQYTFKGKQESDKYSVANLGIIYTLKKQWMINVKNNILLKNNRIFLSGDYRLYIF
SQPNYGLGTDIIPPRRDRDPGFSIDSLAQAMDYNYFKFHQTVSFEVRKNFYVGGGINIDWYTDIKDKELDIENGNLTYHY
NYSQKHGFDNLEYFLTGVSFNLVYDSRDNQVNSSRGWFANINYRFNPVLFDNQKYSNILYAEYRNFIPVSPKNDRYILGI
WAYGQFVTRGEVPYLNLPAIGWDQRSRSGEGYTQGLFRGNGLVYLSTEFRFPLICNQMLSGTVFTNFVTASNADNNIGLF
HSIQPAAGVGLRLLIDKKTRTNLVADYAWGNNSKGFYLNAGEVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51381; Mature: 51381

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYINKRFEFVLIKIKIFWRMKFLKNINFQHKFKTAVLLSITPLFLTAQIKTNPEEREIC
CCCCCCEEEEEEEEEEEEEEEHHHHCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCCCCC
PPKTIFEVFKKKDSVLEIKPAKNNFFLVIPAIGSQPATGFFFGAVAQYTFKGKQESDKYS
CHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEHHHEEEEECCCCCCCCEE
VANLGIIYTLKKQWMINVKNNILLKNNRIFLSGDYRLYIFSQPNYGLGTDIIPPRRDRDP
EEEEEEEEEEEEEEEEEECCCEEEECCEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCC
GFSIDSLAQAMDYNYFKFHQTVSFEVRKNFYVGGGINIDWYTDIKDKELDIENGNLTYHY
CCCHHHHHHHHCCCEEEEEEEEEEEEEEEEEECCCEEEEEEECCCCCEEEEECCCEEEEE
NYSQKHGFDNLEYFLTGVSFNLVYDSRDNQVNSSRGWFANINYRFNPVLFDNQKYSNILY
ECHHHCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEE
AEYRNFIPVSPKNDRYILGIWAYGQFVTRGEVPYLNLPAIGWDQRSRSGEGYTQGLFRGN
EHHCCCCCCCCCCCCEEEEEEEECEEEECCCCCEEECCCCCCCCCCCCCCCCEEHEEECC
GLVYLSTEFRFPLICNQMLSGTVFTNFVTASNADNNIGLFHSIQPAAGVGLRLLIDKKTR
CEEEEEECCCCHHHHHHHHCCEEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCC
TNLVADYAWGNNSKGFYLNAGEVF
CCEEEEEECCCCCCCEEEECCCCC
>Mature Secondary Structure
MNYINKRFEFVLIKIKIFWRMKFLKNINFQHKFKTAVLLSITPLFLTAQIKTNPEEREIC
CCCCCCEEEEEEEEEEEEEEEHHHHCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCCCCC
PPKTIFEVFKKKDSVLEIKPAKNNFFLVIPAIGSQPATGFFFGAVAQYTFKGKQESDKYS
CHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEHHHEEEEECCCCCCCCEE
VANLGIIYTLKKQWMINVKNNILLKNNRIFLSGDYRLYIFSQPNYGLGTDIIPPRRDRDP
EEEEEEEEEEEEEEEEEECCCEEEECCEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCC
GFSIDSLAQAMDYNYFKFHQTVSFEVRKNFYVGGGINIDWYTDIKDKELDIENGNLTYHY
CCCHHHHHHHHCCCEEEEEEEEEEEEEEEEEECCCEEEEEEECCCCCEEEEECCCEEEEE
NYSQKHGFDNLEYFLTGVSFNLVYDSRDNQVNSSRGWFANINYRFNPVLFDNQKYSNILY
ECHHHCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEE
AEYRNFIPVSPKNDRYILGIWAYGQFVTRGEVPYLNLPAIGWDQRSRSGEGYTQGLFRGN
EHHCCCCCCCCCCCCEEEEEEEECEEEECCCCCEEECCCCCCCCCCCCCCCCEEHEEECC
GLVYLSTEFRFPLICNQMLSGTVFTNFVTASNADNNIGLFHSIQPAAGVGLRLLIDKKTR
CEEEEEECCCCHHHHHHHHCCEEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCC
TNLVADYAWGNNSKGFYLNAGEVF
CCEEEEEECCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA