| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is bglB [H]
Identifier: 146301134
GI number: 146301134
Start: 4051709
End: 4054153
Strand: Reverse
Name: bglB [H]
Synonym: Fjoh_3392
Alternate gene names: 146301134
Gene position: 4054153-4051709 (Counterclockwise)
Preceding gene: 146301136
Following gene: 146301132
Centisome position: 66.5
GC content: 35.34
Gene sequence:
>2445_bases ATGAAAAAAACAATTATAAAAACAGCACGAGTATCACTTTTGACTGCTTTAGTGATTTCGAATTTATCATGGAACAGTGT TTCTGATGATGAAAATAATCCGCCTTTTCTAACAGTAAAAGGATTTACTTTTAGAGATTTAAATAAAAATGGAAAACTGG ATATTTATGAAGATACCAGACTTTCGATTCACGAACGTGCTGTCGATTTGGTCAAAAAAATGACTGAGGAAGAAAAAGCT AATTTTTTAATGGGAACGGGAATGCCGGGTTTTGACGGAATAAAACCGGTAGTAGGAGCAATTGAAGGACGTGTTCCAGG GGCTGCAGGAGGAACTTACGAAATTAAACGTTTAGGAATTCCGGCCATTATTGTGGCTGACGGACCTGCGGGACTTAGAA TAAAACCTATTCGTGAGAATGATAAAAATACGTATTACTGTACCGCTTTTCCTGTTGGAACTGCTTTAGCTTCAACATGG AACGAATCATTGATTGAAAAAGTAGGCAAAGCAATGGGAAATGAAGTAAAAGAATATGGAGTTGATGTATTGCTGGCGCC GGCTTTAAACATTCACAGAAATCCTTTGTGCGGCAGAAATTTTGAGTATTATTCTGAAGATCCGCTGGTTTCTGGCAAAA TTGCTTCGGCGATGGTAAAAGGGATTCAGTTAAATGGAGTAGGAACTTCAATTAAACATTTTGCAGCTAATAATCAGGAA ACCAACCGCCTTTCAATCAATGAACACATCAGCGAAAGAGCTATGCGTGAAATTTATTTAAAAGGTTTTGAGATTACTGT AAAAGAATCAAATCCATGGACGGTTATGTCTTCGTATAATTTGATTAACGGAACCTATACTTCGGCAAGAAAAGACCTTC TAACAGATATTCTTCGTAATGAATGGGGGTTTAAAGGGATCGTTATGACAGACTGGTTTGGAGGTTTTGCCGGAGCACAA TCTATTATGGCAGGTTCAAGCAATGTTACAGAACAGCTGAGTGCCGGAAACGATTTATTAATGCCGGGAATCGAAGCACA AAAGAAAGCTATTATTGAAAACATCAATAATAAGAAATTATCTAAAGAAGTTGTAGACAAAAATGTAGAAAGAATTCTGG AATTGGTTTTAAGATCGCCAATTATGGAAAACTACAAATACTCAAACAAACCCAATTTAAAAGAAAACGCACAAATTACC AGACAGGCAGCATCTGAAGGAATGATTTTGCTGAAAAATGATAAAAATGTGCTTCCGTTTACGAACAAAAAAGGAAAAGC AGCCGTTTTTGGAGTTACATCATATGATTTTATTTCGGGAGGAACCGGAAGCGGCGACGTAAACGAAGCTTATACAATTT CTTTATTGGATGGTTTAAAAAATGCAGGTTACTCAATTGATGAAGAATTAAAAACAACTTACACACCATTTGTTGCAAAG GTAAAAGAGGCAGAAATGGAAAGCCGTAAAAAAGAAGGTTTTCTGGCTTTACCAAAAAGACTTCCTGAATTAAAATTGGA AAAACAAGAAATTGCAAAACACGCCGCATCATCAGAATTGGCAATTATAACTATTGGTAGAAATTCTGGAGAAGGAGGCG ACCGCAAGGTTGATAACGATTTTAATCTTGCTCAGGATGAGGTAGAATTAATCAATAATGTTTCTGAAGCTTTTCATTCA AAAGGAAAAAAAGTAGTTGTAATTTTAAATATAGGCGGTGTTATAGAAACTGCAAGCTGGAAAGATAAAGCTGATGCCAT TTTACTTTCATGGCAGCCAGGGCAGGAAGGAGGAAATTCAGTAGCTGATGTTTTTTCAGGAAAAGTAAATCCGTCTGGAA AATTAACTATGACTTTTCCAATGAAATATGAAGACACACCATCGGCAAAAAACTGGTTAGGAACTCCTGCAGACAATCCG GCAAATGTAACGTACGAAGAAGGTGTATATGTTGGATATCGTTATTACAATACCTTTAATGTAAAACCATCTTATGAATT TGGTTTTGGAAATTCATATACAACATTCAATTATTCTGATGTAAAATTAAGTTCACCAGTTTTTAATAATGCAATGACAG TTTCAGTTACAGTTAAAAATACCGGAAAAACTGCTGGGAAAGAAGTAGTGCAAGTATACTTGTCTGCACCTTCAAAATCT ATCGATAAACCCAAAGAAGAATTAAAAGCTTTTGCAAAAACAAAGGAATTAAAACCAGGCGAAAGTGAAACTTTACAACT GGTATTGTCACCAAAAGATCTGGCTTCTTTTTTAGAAAATAAAAATGCATGGATTGCAGAAGCAGGAACTTATAAAGTTT TGGTTGGTGCTTCATCTTTAGACATTAAAAAAACGGCAGAATTTACAGTATCAAATGAAATTGTAGTCGAAAAAGTAAAA AAAGCTTTTGAACTCGACACTCCATTTAAAGAGTTAAAACAATAA
Upstream 100 bases:
>100_bases GAAACGAAAAAAAGTAATTAATATTGCTTCATAATGAAGCAATGAAAAAAGCTGCATATTAAAACTTTACTATTTTCTAA ACCACATTTTAGTTTCCCTT
Downstream 100 bases:
>100_bases TAAATTAAGTAATTGGTTTTTGTAGCAAATTAATGTTTTAACTAAAAATTCCACTTGATATTCGAACAGAATAATTAAGT GGAATTGTCTTTTTTATATC
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 814; Mature: 814
Protein sequence:
>814_residues MKKTIIKTARVSLLTALVISNLSWNSVSDDENNPPFLTVKGFTFRDLNKNGKLDIYEDTRLSIHERAVDLVKKMTEEEKA NFLMGTGMPGFDGIKPVVGAIEGRVPGAAGGTYEIKRLGIPAIIVADGPAGLRIKPIRENDKNTYYCTAFPVGTALASTW NESLIEKVGKAMGNEVKEYGVDVLLAPALNIHRNPLCGRNFEYYSEDPLVSGKIASAMVKGIQLNGVGTSIKHFAANNQE TNRLSINEHISERAMREIYLKGFEITVKESNPWTVMSSYNLINGTYTSARKDLLTDILRNEWGFKGIVMTDWFGGFAGAQ SIMAGSSNVTEQLSAGNDLLMPGIEAQKKAIIENINNKKLSKEVVDKNVERILELVLRSPIMENYKYSNKPNLKENAQIT RQAASEGMILLKNDKNVLPFTNKKGKAAVFGVTSYDFISGGTGSGDVNEAYTISLLDGLKNAGYSIDEELKTTYTPFVAK VKEAEMESRKKEGFLALPKRLPELKLEKQEIAKHAASSELAIITIGRNSGEGGDRKVDNDFNLAQDEVELINNVSEAFHS KGKKVVVILNIGGVIETASWKDKADAILLSWQPGQEGGNSVADVFSGKVNPSGKLTMTFPMKYEDTPSAKNWLGTPADNP ANVTYEEGVYVGYRYYNTFNVKPSYEFGFGNSYTTFNYSDVKLSSPVFNNAMTVSVTVKNTGKTAGKEVVQVYLSAPSKS IDKPKEELKAFAKTKELKPGESETLQLVLSPKDLASFLENKNAWIAEAGTYKVLVGASSLDIKKTAEFTVSNEIVVEKVK KAFELDTPFKELKQ
Sequences:
>Translated_814_residues MKKTIIKTARVSLLTALVISNLSWNSVSDDENNPPFLTVKGFTFRDLNKNGKLDIYEDTRLSIHERAVDLVKKMTEEEKA NFLMGTGMPGFDGIKPVVGAIEGRVPGAAGGTYEIKRLGIPAIIVADGPAGLRIKPIRENDKNTYYCTAFPVGTALASTW NESLIEKVGKAMGNEVKEYGVDVLLAPALNIHRNPLCGRNFEYYSEDPLVSGKIASAMVKGIQLNGVGTSIKHFAANNQE TNRLSINEHISERAMREIYLKGFEITVKESNPWTVMSSYNLINGTYTSARKDLLTDILRNEWGFKGIVMTDWFGGFAGAQ SIMAGSSNVTEQLSAGNDLLMPGIEAQKKAIIENINNKKLSKEVVDKNVERILELVLRSPIMENYKYSNKPNLKENAQIT RQAASEGMILLKNDKNVLPFTNKKGKAAVFGVTSYDFISGGTGSGDVNEAYTISLLDGLKNAGYSIDEELKTTYTPFVAK VKEAEMESRKKEGFLALPKRLPELKLEKQEIAKHAASSELAIITIGRNSGEGGDRKVDNDFNLAQDEVELINNVSEAFHS KGKKVVVILNIGGVIETASWKDKADAILLSWQPGQEGGNSVADVFSGKVNPSGKLTMTFPMKYEDTPSAKNWLGTPADNP ANVTYEEGVYVGYRYYNTFNVKPSYEFGFGNSYTTFNYSDVKLSSPVFNNAMTVSVTVKNTGKTAGKEVVQVYLSAPSKS IDKPKEELKAFAKTKELKPGESETLQLVLSPKDLASFLENKNAWIAEAGTYKVLVGASSLDIKKTAEFTVSNEIVVEKVK KAFELDTPFKELKQ >Mature_814_residues MKKTIIKTARVSLLTALVISNLSWNSVSDDENNPPFLTVKGFTFRDLNKNGKLDIYEDTRLSIHERAVDLVKKMTEEEKA NFLMGTGMPGFDGIKPVVGAIEGRVPGAAGGTYEIKRLGIPAIIVADGPAGLRIKPIRENDKNTYYCTAFPVGTALASTW NESLIEKVGKAMGNEVKEYGVDVLLAPALNIHRNPLCGRNFEYYSEDPLVSGKIASAMVKGIQLNGVGTSIKHFAANNQE TNRLSINEHISERAMREIYLKGFEITVKESNPWTVMSSYNLINGTYTSARKDLLTDILRNEWGFKGIVMTDWFGGFAGAQ SIMAGSSNVTEQLSAGNDLLMPGIEAQKKAIIENINNKKLSKEVVDKNVERILELVLRSPIMENYKYSNKPNLKENAQIT RQAASEGMILLKNDKNVLPFTNKKGKAAVFGVTSYDFISGGTGSGDVNEAYTISLLDGLKNAGYSIDEELKTTYTPFVAK VKEAEMESRKKEGFLALPKRLPELKLEKQEIAKHAASSELAIITIGRNSGEGGDRKVDNDFNLAQDEVELINNVSEAFHS KGKKVVVILNIGGVIETASWKDKADAILLSWQPGQEGGNSVADVFSGKVNPSGKLTMTFPMKYEDTPSAKNWLGTPADNP ANVTYEEGVYVGYRYYNTFNVKPSYEFGFGNSYTTFNYSDVKLSSPVFNNAMTVSVTVKNTGKTAGKEVVQVYLSAPSKS IDKPKEELKAFAKTKELKPGESETLQLVLSPKDLASFLENKNAWIAEAGTYKVLVGASSLDIKKTAEFTVSNEIVVEKVK KAFELDTPFKELKQ
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=716, Percent_Identity=29.608938547486, Blast_Score=228, Evalue=1e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 89371; Mature: 89371
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3 ; PS00227 TUBULIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTIIKTARVSLLTALVISNLSWNSVSDDENNPPFLTVKGFTFRDLNKNGKLDIYEDTR CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCEEEEECCC LSIHERAVDLVKKMTEEEKANFLMGTGMPGFDGIKPVVGAIEGRVPGAAGGTYEIKRLGI HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCC PAIIVADGPAGLRIKPIRENDKNTYYCTAFPVGTALASTWNESLIEKVGKAMGNEVKEYG CEEEEECCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VDVLLAPALNIHRNPLCGRNFEYYSEDPLVSGKIASAMVKGIQLNGVGTSIKHFAANNQE CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEECCCCHHHHHHCCCCC TNRLSINEHISERAMREIYLKGFEITVKESNPWTVMSSYNLINGTYTSARKDLLTDILRN CCEEEHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCEECCCHHHHHHHHHHHHHHC EWGFKGIVMTDWFGGFAGAQSIMAGSSNVTEQLSAGNDLLMPGIEAQKKAIIENINNKKL CCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHCCCCEECCCCHHHHHHHHHCCCCHHH SKEVVDKNVERILELVLRSPIMENYKYSNKPNLKENAQITRQAASEGMILLKNDKNVLPF HHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCC TNKKGKAAVFGVTSYDFISGGTGSGDVNEAYTISLLDGLKNAGYSIDEELKTTYTPFVAK CCCCCCEEEEEECCCHHCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCHHHHHHHCHHHHH VKEAEMESRKKEGFLALPKRLPELKLEKQEIAKHAASSELAIITIGRNSGEGGDRKVDND HHHHHHHHHHHCCEEECHHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC FNLAQDEVELINNVSEAFHSKGKKVVVILNIGGVIETASWKDKADAILLSWQPGQEGGNS CCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCCCCEEEEEECCCCCCCCH VADVFSGKVNPSGKLTMTFPMKYEDTPSAKNWLGTPADNPANVTYEEGVYVGYRYYNTFN HHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEEEEE VKPSYEFGFGNSYTTFNYSDVKLSSPVFNNAMTVSVTVKNTGKTAGKEVVQVYLSAPSKS CCCCCEECCCCCEEEEECCCEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCC IDKPKEELKAFAKTKELKPGESETLQLVLSPKDLASFLENKNAWIAEAGTYKVLVGASSL CCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHCCCCCEEEECCCEEEEEECCCC DIKKTAEFTVSNEIVVEKVKKAFELDTPFKELKQ CCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHCC >Mature Secondary Structure MKKTIIKTARVSLLTALVISNLSWNSVSDDENNPPFLTVKGFTFRDLNKNGKLDIYEDTR CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCEEEEECCC LSIHERAVDLVKKMTEEEKANFLMGTGMPGFDGIKPVVGAIEGRVPGAAGGTYEIKRLGI HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCC PAIIVADGPAGLRIKPIRENDKNTYYCTAFPVGTALASTWNESLIEKVGKAMGNEVKEYG CEEEEECCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VDVLLAPALNIHRNPLCGRNFEYYSEDPLVSGKIASAMVKGIQLNGVGTSIKHFAANNQE CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEECCCCHHHHHHCCCCC TNRLSINEHISERAMREIYLKGFEITVKESNPWTVMSSYNLINGTYTSARKDLLTDILRN CCEEEHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCEECCCHHHHHHHHHHHHHHC EWGFKGIVMTDWFGGFAGAQSIMAGSSNVTEQLSAGNDLLMPGIEAQKKAIIENINNKKL CCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHCCCCEECCCCHHHHHHHHHCCCCHHH SKEVVDKNVERILELVLRSPIMENYKYSNKPNLKENAQITRQAASEGMILLKNDKNVLPF HHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCC TNKKGKAAVFGVTSYDFISGGTGSGDVNEAYTISLLDGLKNAGYSIDEELKTTYTPFVAK CCCCCCEEEEEECCCHHCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCHHHHHHHCHHHHH VKEAEMESRKKEGFLALPKRLPELKLEKQEIAKHAASSELAIITIGRNSGEGGDRKVDND HHHHHHHHHHHCCEEECHHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC FNLAQDEVELINNVSEAFHSKGKKVVVILNIGGVIETASWKDKADAILLSWQPGQEGGNS CCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCCCCEEEEEECCCCCCCCH VADVFSGKVNPSGKLTMTFPMKYEDTPSAKNWLGTPADNPANVTYEEGVYVGYRYYNTFN HHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEEEEE VKPSYEFGFGNSYTTFNYSDVKLSSPVFNNAMTVSVTVKNTGKTAGKEVVQVYLSAPSKS CCCCCEECCCCCEEEEECCCEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCC IDKPKEELKAFAKTKELKPGESETLQLVLSPKDLASFLENKNAWIAEAGTYKVLVGASSL CCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHCCCCCEEEECCCEEEEEECCCC DIKKTAEFTVSNEIVVEKVKKAFELDTPFKELKQ CCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2505054 [H]