| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is bglB [H]
Identifier: 146301131
GI number: 146301131
Start: 4047011
End: 4049227
Strand: Reverse
Name: bglB [H]
Synonym: Fjoh_3389
Alternate gene names: 146301131
Gene position: 4049227-4047011 (Counterclockwise)
Preceding gene: 146301132
Following gene: 146301130
Centisome position: 66.41
GC content: 37.17
Gene sequence:
>2217_bases ATGTTTAAAAACGTTAAAACAATCGTTGTTTTAGTTTTATTGAGTTCATTCGGATTGAATGCACAAAATAAAGTTCCGGT TTATCTTGATGATAAGAAGCCAATTGATGAGCGTGTAGAAGATGCGCTTAAAAGAATGACAACCGAAGAGAAAATTGCCA TGATCCATGCGCAGTCTAAATTTAGTTCACCTGGAGTGAAACGTCTTGGAATTCCTGAAAACTGGATGACCGACGGACCT CACGGAATTCGTACTGAAGTAAAATGGGATGAATGGGATCAGGCTGGATGGACAAATGACTCTTGTATCGCATTTCCGGC TTTAACAGCTCTTTCTTCAACATGGAACAAAGAACTATCTTCTTTATACGGAAAATCAATTGGAGAAGAAGCACGTTATC GTAACAAAAATGTACTATTAGGACCAGGAGTAAACATTTACAGAAGTCCATTAAACGGCCGTAATTTCGAATACATGGGA GAAGATCCGTTTTTGGCTGCAAAAATGGTTGTACCTTATATTAAAGGAGTACAGGCAAACGGTGTTGCTGCTTGTGTAAA ACACTTTGCATTAAACAATCAGGAAACAAACCGTAATTCTGTAAACGTAATCGTTGACGATCGTGCATTATACGAAATTT ATCTTCCGGCTTTTAAAGCTGCAGTTCAGGAAGGCGATGTTTGGTCGATTATGGGATCTTACAACAAATACAAAGGACAG CAATGCTGCCACAACGAATATTTGTTAAACGATATTCTTCGAGATGAATGGGGCTTTAAAGGTGTTGTAGTTTCAGACTG GGGAGGAGTAAATGATACCAAACAAGCTATTCACAATGGTCTTGATATGGAATTTGGTTCTTGGACGAATGGTCTTTCAT GGGGAACAAGTAATGCTTATGATAACTATTACTTAGCAAAACCGTATTCGGAAATGATTAAAAAAGGTGAAGTAGGCACA AAAGAGTTAGACGAAAAAGTACGTCGTATTTTACGTTTATCTTTCTTGACTACGATGGATAGAAATCGTCCGTTTGGATC TTTTGGAACACAAGAACACGCTGATGCAGGCCGTAAAATTGCCGAAGAAGGAATTGTATTATTACAAAACAACAATAACA TTCTGCCAATTAACCTTTCTAAAACTAAGAAAATTGCAGTAATTGGAGAAAATGCTATTAAAATGATGACAGTAGGAGGA GGAAGTTCTTCTCTTAAAGCTAGATACGAAATTACACCTCTTGAAGGTTTAAAGAAAAGAATTGGCAACCAGGCAGAAAT CGTGTATGCACGAGGTTATGTGGGAGATCCAACAAGTAACTACAACGGAGTTGTTGCAAAAGTAAGCTTAGAAGAAAAAC GTCCACAGGCTGAATTAACTGCCGAAGCTTTAAAAGCTGCTAAAGATGCAGATATCGTTCTTTTTATTGGAGGTTTGAAC AAAAGTCCAAATCAGGATGACGAAGGACACGATCGTAAACAATTAGAATTGCCTTATGGTCAGGATAAATTAATCAGCGA ATTAGCAAAAGTAAATAAAAACATTGTTTTTGTAAATATTTCAGGAAATGCAGTTGCAATGCCGTGGGTAAAAGAAGTTC CTGGAATTGTTCAGGGATGGTTTTTAGGAACTGAGGCTGGAAACGCTTTAGCAAATGTTTTAGTTGGAGACGTAAACCCT TCTGGAAAACTTTCTTTTACTTTCCCTGTAAAATTAGCTGATAACGGAGCTCATGCTTTAGGAGAATTTCCAGGCGGCGA TGAGGTAAAATACAACGAAGGAATTTTTGTTGGATACCGCTGGGTTGATAAAAATAAAGTTAAACCATTGTTTCCTTTCG GACACGGATTAAGCTACACAACTTTTGCTTACGGAAAAGTAACAGCTGATAAAAAACAACTTTCAAGCAGTGATAAAATT ACATTTTCTGTGAATGTGAAAAATACAGGAAGCAGAGAAGGATCTGAAGTTGTTCAGCTTTATATCAGCGATTTAAAATC TTCATTACCACGTCCGGTAAAAGAATTAAAAGGATTTGAAAAAGTTTCGCTAAAAGCGGGAGAAGAAAAAACAGTTACGT TTACTATCGATAAAACGGCTTTAAGTTTCTTTGATGATAAAAAACACGACTGGGTTGCAGAACCGGGAGCTTTTGAAGCA ATTGTTGGAGCATCTTCAACAGATATAAAATCGAAAGTGGGCTTCTCACTTCAATAA
Upstream 100 bases:
>100_bases ACATGTACGATAACGTTTTAGTTTTACAATATTATTAAAAGGTACAACTGACCACTAGTATCTTTTTAGAAATTGAATGC TTAAATAAATTATAATAGTT
Downstream 100 bases:
>100_bases TTTCATTATTTCTAAATTGGTTGGTTAGTAAAAGCTGCAAGTGTAAAAATTTGCAGCTTTGCTTTTGATTTAATTTTACC ATTAAGATGATTAAGAGAGC
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 738; Mature: 738
Protein sequence:
>738_residues MFKNVKTIVVLVLLSSFGLNAQNKVPVYLDDKKPIDERVEDALKRMTTEEKIAMIHAQSKFSSPGVKRLGIPENWMTDGP HGIRTEVKWDEWDQAGWTNDSCIAFPALTALSSTWNKELSSLYGKSIGEEARYRNKNVLLGPGVNIYRSPLNGRNFEYMG EDPFLAAKMVVPYIKGVQANGVAACVKHFALNNQETNRNSVNVIVDDRALYEIYLPAFKAAVQEGDVWSIMGSYNKYKGQ QCCHNEYLLNDILRDEWGFKGVVVSDWGGVNDTKQAIHNGLDMEFGSWTNGLSWGTSNAYDNYYLAKPYSEMIKKGEVGT KELDEKVRRILRLSFLTTMDRNRPFGSFGTQEHADAGRKIAEEGIVLLQNNNNILPINLSKTKKIAVIGENAIKMMTVGG GSSSLKARYEITPLEGLKKRIGNQAEIVYARGYVGDPTSNYNGVVAKVSLEEKRPQAELTAEALKAAKDADIVLFIGGLN KSPNQDDEGHDRKQLELPYGQDKLISELAKVNKNIVFVNISGNAVAMPWVKEVPGIVQGWFLGTEAGNALANVLVGDVNP SGKLSFTFPVKLADNGAHALGEFPGGDEVKYNEGIFVGYRWVDKNKVKPLFPFGHGLSYTTFAYGKVTADKKQLSSSDKI TFSVNVKNTGSREGSEVVQLYISDLKSSLPRPVKELKGFEKVSLKAGEEKTVTFTIDKTALSFFDDKKHDWVAEPGAFEA IVGASSTDIKSKVGFSLQ
Sequences:
>Translated_738_residues MFKNVKTIVVLVLLSSFGLNAQNKVPVYLDDKKPIDERVEDALKRMTTEEKIAMIHAQSKFSSPGVKRLGIPENWMTDGP HGIRTEVKWDEWDQAGWTNDSCIAFPALTALSSTWNKELSSLYGKSIGEEARYRNKNVLLGPGVNIYRSPLNGRNFEYMG EDPFLAAKMVVPYIKGVQANGVAACVKHFALNNQETNRNSVNVIVDDRALYEIYLPAFKAAVQEGDVWSIMGSYNKYKGQ QCCHNEYLLNDILRDEWGFKGVVVSDWGGVNDTKQAIHNGLDMEFGSWTNGLSWGTSNAYDNYYLAKPYSEMIKKGEVGT KELDEKVRRILRLSFLTTMDRNRPFGSFGTQEHADAGRKIAEEGIVLLQNNNNILPINLSKTKKIAVIGENAIKMMTVGG GSSSLKARYEITPLEGLKKRIGNQAEIVYARGYVGDPTSNYNGVVAKVSLEEKRPQAELTAEALKAAKDADIVLFIGGLN KSPNQDDEGHDRKQLELPYGQDKLISELAKVNKNIVFVNISGNAVAMPWVKEVPGIVQGWFLGTEAGNALANVLVGDVNP SGKLSFTFPVKLADNGAHALGEFPGGDEVKYNEGIFVGYRWVDKNKVKPLFPFGHGLSYTTFAYGKVTADKKQLSSSDKI TFSVNVKNTGSREGSEVVQLYISDLKSSLPRPVKELKGFEKVSLKAGEEKTVTFTIDKTALSFFDDKKHDWVAEPGAFEA IVGASSTDIKSKVGFSLQ >Mature_738_residues MFKNVKTIVVLVLLSSFGLNAQNKVPVYLDDKKPIDERVEDALKRMTTEEKIAMIHAQSKFSSPGVKRLGIPENWMTDGP HGIRTEVKWDEWDQAGWTNDSCIAFPALTALSSTWNKELSSLYGKSIGEEARYRNKNVLLGPGVNIYRSPLNGRNFEYMG EDPFLAAKMVVPYIKGVQANGVAACVKHFALNNQETNRNSVNVIVDDRALYEIYLPAFKAAVQEGDVWSIMGSYNKYKGQ QCCHNEYLLNDILRDEWGFKGVVVSDWGGVNDTKQAIHNGLDMEFGSWTNGLSWGTSNAYDNYYLAKPYSEMIKKGEVGT KELDEKVRRILRLSFLTTMDRNRPFGSFGTQEHADAGRKIAEEGIVLLQNNNNILPINLSKTKKIAVIGENAIKMMTVGG GSSSLKARYEITPLEGLKKRIGNQAEIVYARGYVGDPTSNYNGVVAKVSLEEKRPQAELTAEALKAAKDADIVLFIGGLN KSPNQDDEGHDRKQLELPYGQDKLISELAKVNKNIVFVNISGNAVAMPWVKEVPGIVQGWFLGTEAGNALANVLVGDVNP SGKLSFTFPVKLADNGAHALGEFPGGDEVKYNEGIFVGYRWVDKNKVKPLFPFGHGLSYTTFAYGKVTADKKQLSSSDKI TFSVNVKNTGSREGSEVVQLYISDLKSSLPRPVKELKGFEKVSLKAGEEKTVTFTIDKTALSFFDDKKHDWVAEPGAFEA IVGASSTDIKSKVGFSLQ
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=707, Percent_Identity=32.6732673267327, Blast_Score=311, Evalue=1e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 81487; Mature: 81487
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKNVKTIVVLVLLSSFGLNAQNKVPVYLDDKKPIDERVEDALKRMTTEEKIAMIHAQSK CCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHHEEEEEECCC FSSPGVKRLGIPENWMTDGPHGIRTEVKWDEWDQAGWTNDSCIAFPALTALSSTWNKELS CCCCCCEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH SLYGKSIGEEARYRNKNVLLGPGVNIYRSPLNGRNFEYMGEDPFLAAKMVVPYIKGVQAN HHHHHCCCHHHHHCCCCEEECCCCCEEECCCCCCCCEECCCCCCHHHHHHHHHHCCCCCC GVAACVKHFALNNQETNRNSVNVIVDDRALYEIYLPAFKAAVQEGDVWSIMGSYNKYKGQ CHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCH QCCHNEYLLNDILRDEWGFKGVVVSDWGGVNDTKQAIHNGLDMEFGSWTNGLSWGTSNAY HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC DNYYLAKPYSEMIKKGEVGTKELDEKVRRILRLSFLTTMDRNRPFGSFGTQEHADAGRKI CCEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH AEEGIVLLQNNNNILPINLSKTKKIAVIGENAIKMMTVGGGSSSLKARYEITPLEGLKKR HHCCEEEEECCCCEEEEECCCCEEEEEEECCCEEEEEECCCCCCCEEEEEECCHHHHHHH IGNQAEIVYARGYVGDPTSNYNGVVAKVSLEEKRPQAELTAEALKAAKDADIVLFIGGLN CCCCEEEEEECCCCCCCCCCCCCEEEEEEEHHCCCHHHHHHHHHHHCCCCCEEEEEECCC KSPNQDDEGHDRKQLELPYGQDKLISELAKVNKNIVFVNISGNAVAMPWVKEVPGIVQGW CCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCEEEEEECCCEEECCHHHHCCHHHHHE FLGTEAGNALANVLVGDVNPSGKLSFTFPVKLADNGAHALGEFPGGDEVKYNEGIFVGYR EEECCCCCCEEHHEEECCCCCCEEEEEEEEEEECCCCHHCCCCCCCCCEEECCCEEEEEE WVDKNKVKPLFPFGHGLSYTTFAYGKVTADKKQLSSSDKITFSVNVKNTGSREGSEVVQL EECCCCCCEECCCCCCCCEEEEEEEEEECCHHHCCCCCCEEEEEEECCCCCCCHHHHHHH YISDLKSSLPRPVKELKGFEKVSLKAGEEKTVTFTIDKTALSFFDDKKHDWVAEPGAFEA HHHHHHHHCCCHHHHHCCCEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCCCCEE IVGASSTDIKSKVGFSLQ EECCCCCCHHHCCCCCCC >Mature Secondary Structure MFKNVKTIVVLVLLSSFGLNAQNKVPVYLDDKKPIDERVEDALKRMTTEEKIAMIHAQSK CCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHHEEEEEECCC FSSPGVKRLGIPENWMTDGPHGIRTEVKWDEWDQAGWTNDSCIAFPALTALSSTWNKELS CCCCCCEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH SLYGKSIGEEARYRNKNVLLGPGVNIYRSPLNGRNFEYMGEDPFLAAKMVVPYIKGVQAN HHHHHCCCHHHHHCCCCEEECCCCCEEECCCCCCCCEECCCCCCHHHHHHHHHHCCCCCC GVAACVKHFALNNQETNRNSVNVIVDDRALYEIYLPAFKAAVQEGDVWSIMGSYNKYKGQ CHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCH QCCHNEYLLNDILRDEWGFKGVVVSDWGGVNDTKQAIHNGLDMEFGSWTNGLSWGTSNAY HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC DNYYLAKPYSEMIKKGEVGTKELDEKVRRILRLSFLTTMDRNRPFGSFGTQEHADAGRKI CCEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH AEEGIVLLQNNNNILPINLSKTKKIAVIGENAIKMMTVGGGSSSLKARYEITPLEGLKKR HHCCEEEEECCCCEEEEECCCCEEEEEEECCCEEEEEECCCCCCCEEEEEECCHHHHHHH IGNQAEIVYARGYVGDPTSNYNGVVAKVSLEEKRPQAELTAEALKAAKDADIVLFIGGLN CCCCEEEEEECCCCCCCCCCCCCEEEEEEEHHCCCHHHHHHHHHHHCCCCCEEEEEECCC KSPNQDDEGHDRKQLELPYGQDKLISELAKVNKNIVFVNISGNAVAMPWVKEVPGIVQGW CCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCEEEEEECCCEEECCHHHHCCHHHHHE FLGTEAGNALANVLVGDVNPSGKLSFTFPVKLADNGAHALGEFPGGDEVKYNEGIFVGYR EEECCCCCCEEHHEEECCCCCCEEEEEEEEEEECCCCHHCCCCCCCCCEEECCCEEEEEE WVDKNKVKPLFPFGHGLSYTTFAYGKVTADKKQLSSSDKITFSVNVKNTGSREGSEVVQL EECCCCCCEECCCCCCCCEEEEEEEEEECCHHHCCCCCCEEEEEEECCCCCCCHHHHHHH YISDLKSSLPRPVKELKGFEKVSLKAGEEKTVTFTIDKTALSFFDDKKHDWVAEPGAFEA HHHHHHHHCCCHHHHHCCCEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCCCCEE IVGASSTDIKSKVGFSLQ EECCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2505054 [H]