| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301114
Identifier: 146301114
GI number: 146301114
Start: 4031218
End: 4031625
Strand: Reverse
Name: 146301114
Synonym: Fjoh_3372
Alternate gene names: NA
Gene position: 4031625-4031218 (Counterclockwise)
Preceding gene: 146301115
Following gene: 146301112
Centisome position: 66.13
GC content: 39.22
Gene sequence:
>408_bases ATGTCTAAGAATTATTCAGCCGTTATCGAAGAAGGAAAAGTCCCGAATACATATATGACGGGTGACGTTTCCTATAAAAA ACAAAGCAGTGACATTCATCCGGAAAACACTGTAATTAAGGAAGTGACTTTTGAGCCTTGCTCAAGAAGTAATTGGCATA GTAACGCGAGTCTGCACATGCTGATTGCAAAAGAAGGAACGGGGTATTATCAGGAAAGAGGAAGCGCAGTCAGAATGCTT AAAAAAGATGAGGTAGTTACCATTTTGCCGGGAGTAGAACATTGGTACGGAGCAACTCCATTTGAAAAATTCTCTTATGT TGCCATTATCACAGAGATTGATAAAGGCCACGGAGTCTGGTTAGAAAAAGTAACCGATGGAGAATATTTTCTATTAAGCA GTCATTAA
Upstream 100 bases:
>100_bases CAAATACACAAACGGGAATTGTAGACTGGCTTGAGCCGGTAACTGATGAAGAATACAATAGTTTTAAATAAAATCAATCT CAAAAAATAAATTAAAAATT
Downstream 100 bases:
>100_bases TTTTAGAAGTTTAGAGAAACAAAGTGACAAAGTAGCAAAGGTTTAAAGAGACAAAGATTTAAAGCTTTTTTCTTTGTCTC TTTGAACCTTTGTTACTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; Cupin 2 Conserved Barrel Domain-Containing Protein; 4-Carboxymuconolactone Decarboxylase; Transcriptional Regulator; Cupin Family Protein; Cupin 2 Barrel; Cupin Region; Cupin Domain-Containing Protein; Double-Stranded Beta-Helix-Like Protein; Cupin Domain Protein; Cupin 2 Barrel Domain-Containing Protein; RmlC-Type Cupin; Exported RmlC-Type Cupin; Conserved Protein; ABC-2 Type Transporter; Double-Stranded Beta-Helix Protein
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSKNYSAVIEEGKVPNTYMTGDVSYKKQSSDIHPENTVIKEVTFEPCSRSNWHSNASLHMLIAKEGTGYYQERGSAVRML KKDEVVTILPGVEHWYGATPFEKFSYVAIITEIDKGHGVWLEKVTDGEYFLLSSH
Sequences:
>Translated_135_residues MSKNYSAVIEEGKVPNTYMTGDVSYKKQSSDIHPENTVIKEVTFEPCSRSNWHSNASLHMLIAKEGTGYYQERGSAVRML KKDEVVTILPGVEHWYGATPFEKFSYVAIITEIDKGHGVWLEKVTDGEYFLLSSH >Mature_134_residues SKNYSAVIEEGKVPNTYMTGDVSYKKQSSDIHPENTVIKEVTFEPCSRSNWHSNASLHMLIAKEGTGYYQERGSAVRMLK KDEVVTILPGVEHWYGATPFEKFSYVAIITEIDKGHGVWLEKVTDGEYFLLSSH
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15292; Mature: 15161
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNYSAVIEEGKVPNTYMTGDVSYKKQSSDIHPENTVIKEVTFEPCSRSNWHSNASLHM CCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEE LIAKEGTGYYQERGSAVRMLKKDEVVTILPGVEHWYGATPFEKFSYVAIITEIDKGHGVW EEEECCCCHHHHCCCEEEEECCCCEEEEECCCHHHCCCCCCHHEEEEEEEEEECCCCCEE LEKVTDGEYFLLSSH EEEECCCCEEEEECC >Mature Secondary Structure SKNYSAVIEEGKVPNTYMTGDVSYKKQSSDIHPENTVIKEVTFEPCSRSNWHSNASLHM CCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEE LIAKEGTGYYQERGSAVRMLKKDEVVTILPGVEHWYGATPFEKFSYVAIITEIDKGHGVW EEEECCCCHHHHCCCEEEEECCCCEEEEECCCHHHCCCCCCHHEEEEEEEEEECCCCCEE LEKVTDGEYFLLSSH EEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA