Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301083

Identifier: 146301083

GI number: 146301083

Start: 3992543

End: 3994021

Strand: Direct

Name: 146301083

Synonym: Fjoh_3339

Alternate gene names: NA

Gene position: 3992543-3994021 (Clockwise)

Preceding gene: 146301082

Following gene: 146301084

Centisome position: 65.49

GC content: 34.55

Gene sequence:

>1479_bases
ATGACTCGTATTAAGATATTCAGTATATTATTTACAGCTCTGTTATATATTTCATGTTCAAAAGATGATTATAAATTAGG
TTCAGATATTGATCCTTTTTTAAGATTTAATTTTTTAGTAAAAAGTGATAACACACCTTTAGAATACCCGGCTGTAAACG
GAAATCTAGTTCCTCAGTCAACTTATGACAACAAAGCGATAAGAACATTAAAAGTTCCTGTAGCTTTAACAACACGTGCC
TTAAAGGGAACTGTTACAGCCAATTTTAGTGCCGAAACAAATGGTGCCAGCGACAGTTTCAGCGTAAATCCTGTAAATCA
GCTTACTTTTCAAGGCAGTAAATTAACTGATACTATTTATGTGTCATTTGATAAAAGATGGGCTGCAAGTCAAAATATTA
AGCTAAAATTGGAAACCGTTTCCGATCCTGATATTCATATTGGAAATCTAAATTCTGCATATCCAAACGATACTTTCAAT
ATCAATTTAGGAACTATCGCTACTAATTATACTTTTCCTGTAACAAAGTACAATGTAAAAGGCGAAATAGGTGAAACAAT
TGATTTTAAAGTATACTATCCTAATGGTTTTTTCCCGGAAGAAATTGAAAATGCTTCTATTTTTAAGTTCCAAAACGGAT
TCGAATATTCTTTAACACATGACGATTATGGTGATAACAGAACTTCTGTAAACTATCATTTAACTCTTTTAGAAGATCTT
CAAAACGATGATGCTCAATACGAGTCTAAATTAACGTTAATCAATATTCCAAATTATACGGCTACAGGAAATATCAGCTT
AACTATTACAAAACCAATAAAAATACCAAGAGATATTCAGGCATATCCAGCTTCGAAATTTACAGATCCAACAAATGCCT
TTTATCTAACATATGGTGAACATTGGTTTAACAATAATGGTGCTTGTTCGTGGCAGACTTTCAATGCTCTAACTTTCCCG
GTTATTGTTACTAAAGACGATCCTAATGCCATATTATACAGTGATAGAGGAACTACAAACCCAAATGATGACATTTACCA
CGATGCTTTTAAAATTGGCTTTAACGTTGCCAGCGGAACCAACACTGTAAACTCTTTTGGTTTAAAGAGATGGTTCTCTA
ACGAAAGCAACTCAGCGTCCATTTCTCCAGGGTTCAACATTACTTCGGCATTGGAGTTTTTCCCTGCAAATGGAAACAGC
AAAACTGAAGGAACGGTTCTCGTAATTCCGCAGGACATTACCATTGGATCTGCCGCAACGGCTTCAGTTCCATCAAAGTC
ACATATCATTGCTATTTCCGGCGAAGGAACTTACAAAGAAATCAGCAATGGTTTATATGAAATTTCATTTGAATTGAAAC
TAACAAATGACGAACTTTTTGGAGGAACAGTTTCGACACAATACAGAATGTTCAACAACAGAACATATCCAAAACCTGCT
GCTTTGAGTATTCCGTGTCCTAAGGAGGTTACGCTTTAA

Upstream 100 bases:

>100_bases
GGCTGTATCGCCACAGTTTGCAGTTTGACTTATCCGTCTTTAAAATACGTCCTGCCAATACCAACATACAACACTAATCT
TAACCCAAACTTGCAGCAAA

Downstream 100 bases:

>100_bases
GTATTTAGTCGCAGTTAACAGTCGCAGTTAACAGTCTGGAATCTTTATTCAAGCTTTGTCAAAGTTTAAAACTTTGACAA
AGCTTTTGAAGTCTAAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MTRIKIFSILFTALLYISCSKDDYKLGSDIDPFLRFNFLVKSDNTPLEYPAVNGNLVPQSTYDNKAIRTLKVPVALTTRA
LKGTVTANFSAETNGASDSFSVNPVNQLTFQGSKLTDTIYVSFDKRWAASQNIKLKLETVSDPDIHIGNLNSAYPNDTFN
INLGTIATNYTFPVTKYNVKGEIGETIDFKVYYPNGFFPEEIENASIFKFQNGFEYSLTHDDYGDNRTSVNYHLTLLEDL
QNDDAQYESKLTLINIPNYTATGNISLTITKPIKIPRDIQAYPASKFTDPTNAFYLTYGEHWFNNNGACSWQTFNALTFP
VIVTKDDPNAILYSDRGTTNPNDDIYHDAFKIGFNVASGTNTVNSFGLKRWFSNESNSASISPGFNITSALEFFPANGNS
KTEGTVLVIPQDITIGSAATASVPSKSHIIAISGEGTYKEISNGLYEISFELKLTNDELFGGTVSTQYRMFNNRTYPKPA
ALSIPCPKEVTL

Sequences:

>Translated_492_residues
MTRIKIFSILFTALLYISCSKDDYKLGSDIDPFLRFNFLVKSDNTPLEYPAVNGNLVPQSTYDNKAIRTLKVPVALTTRA
LKGTVTANFSAETNGASDSFSVNPVNQLTFQGSKLTDTIYVSFDKRWAASQNIKLKLETVSDPDIHIGNLNSAYPNDTFN
INLGTIATNYTFPVTKYNVKGEIGETIDFKVYYPNGFFPEEIENASIFKFQNGFEYSLTHDDYGDNRTSVNYHLTLLEDL
QNDDAQYESKLTLINIPNYTATGNISLTITKPIKIPRDIQAYPASKFTDPTNAFYLTYGEHWFNNNGACSWQTFNALTFP
VIVTKDDPNAILYSDRGTTNPNDDIYHDAFKIGFNVASGTNTVNSFGLKRWFSNESNSASISPGFNITSALEFFPANGNS
KTEGTVLVIPQDITIGSAATASVPSKSHIIAISGEGTYKEISNGLYEISFELKLTNDELFGGTVSTQYRMFNNRTYPKPA
ALSIPCPKEVTL
>Mature_491_residues
TRIKIFSILFTALLYISCSKDDYKLGSDIDPFLRFNFLVKSDNTPLEYPAVNGNLVPQSTYDNKAIRTLKVPVALTTRAL
KGTVTANFSAETNGASDSFSVNPVNQLTFQGSKLTDTIYVSFDKRWAASQNIKLKLETVSDPDIHIGNLNSAYPNDTFNI
NLGTIATNYTFPVTKYNVKGEIGETIDFKVYYPNGFFPEEIENASIFKFQNGFEYSLTHDDYGDNRTSVNYHLTLLEDLQ
NDDAQYESKLTLINIPNYTATGNISLTITKPIKIPRDIQAYPASKFTDPTNAFYLTYGEHWFNNNGACSWQTFNALTFPV
IVTKDDPNAILYSDRGTTNPNDDIYHDAFKIGFNVASGTNTVNSFGLKRWFSNESNSASISPGFNITSALEFFPANGNSK
TEGTVLVIPQDITIGSAATASVPSKSHIIAISGEGTYKEISNGLYEISFELKLTNDELFGGTVSTQYRMFNNRTYPKPAA
LSIPCPKEVTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54583; Mature: 54452

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIKIFSILFTALLYISCSKDDYKLGSDIDPFLRFNFLVKSDNTPLEYPAVNGNLVPQS
CCEEEHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCC
TYDNKAIRTLKVPVALTTRALKGTVTANFSAETNGASDSFSVNPVNQLTFQGSKLTDTIY
CCCCCEEEEEEECEEEEEEEEEEEEEEEEECCCCCCCCCEECCCCHHEEECCCEEEEEEE
VSFDKRWAASQNIKLKLETVSDPDIHIGNLNSAYPNDTFNINLGTIATNYTFPVTKYNVK
EEECCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCEEEEEECEEEEEEEEEEEEEEEC
GEIGETIDFKVYYPNGFFPEEIENASIFKFQNGFEYSLTHDDYGDNRTSVNYHLTLLEDL
CCCCCEEEEEEECCCCCCHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEEEEEECC
QNDDAQYESKLTLINIPNYTATGNISLTITKPIKIPRDIQAYPASKFTDPTNAFYLTYGE
CCCCCCHHCEEEEEECCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECH
HWFNNNGACSWQTFNALTFPVIVTKDDPNAILYSDRGTTNPNDDIYHDAFKIGFNVASGT
HEECCCCEEEEEECCEEEEEEEEECCCCCEEEECCCCCCCCCCCCEECEEEEEEEEECCC
NTVNSFGLKRWFSNESNSASISPGFNITSALEFFPANGNSKTEGTVLVIPQDITIGSAAT
CCHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEEEEECCEEECCCCC
ASVPSKSHIIAISGEGTYKEISNGLYEISFELKLTNDELFGGTVSTQYRMFNNRTYPKPA
CCCCCCCEEEEEECCCCHHHHCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCC
ALSIPCPKEVTL
EEECCCCCCCCC
>Mature Secondary Structure 
TRIKIFSILFTALLYISCSKDDYKLGSDIDPFLRFNFLVKSDNTPLEYPAVNGNLVPQS
CEEEHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCC
TYDNKAIRTLKVPVALTTRALKGTVTANFSAETNGASDSFSVNPVNQLTFQGSKLTDTIY
CCCCCEEEEEEECEEEEEEEEEEEEEEEEECCCCCCCCCEECCCCHHEEECCCEEEEEEE
VSFDKRWAASQNIKLKLETVSDPDIHIGNLNSAYPNDTFNINLGTIATNYTFPVTKYNVK
EEECCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCEEEEEECEEEEEEEEEEEEEEEC
GEIGETIDFKVYYPNGFFPEEIENASIFKFQNGFEYSLTHDDYGDNRTSVNYHLTLLEDL
CCCCCEEEEEEECCCCCCHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEEEEEECC
QNDDAQYESKLTLINIPNYTATGNISLTITKPIKIPRDIQAYPASKFTDPTNAFYLTYGE
CCCCCCHHCEEEEEECCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECH
HWFNNNGACSWQTFNALTFPVIVTKDDPNAILYSDRGTTNPNDDIYHDAFKIGFNVASGT
HEECCCCEEEEEECCEEEEEEEEECCCCCEEEECCCCCCCCCCCCEECEEEEEEEEECCC
NTVNSFGLKRWFSNESNSASISPGFNITSALEFFPANGNSKTEGTVLVIPQDITIGSAAT
CCHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEEEEECCEEECCCCC
ASVPSKSHIIAISGEGTYKEISNGLYEISFELKLTNDELFGGTVSTQYRMFNNRTYPKPA
CCCCCCCEEEEEECCCCHHHHCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCC
ALSIPCPKEVTL
EEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA