| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301057
Identifier: 146301057
GI number: 146301057
Start: 3955632
End: 3957548
Strand: Reverse
Name: 146301057
Synonym: Fjoh_3313
Alternate gene names: NA
Gene position: 3957548-3955632 (Counterclockwise)
Preceding gene: 146301058
Following gene: 146301056
Centisome position: 64.91
GC content: 30.73
Gene sequence:
>1917_bases ATGAAAACTTACCGTTCGTATAAAAAAGTTGATCCCGTTTATTTTAGCGGCGAAATTTTCTTTCCAGTCGGATTATTGTG TGCGGCCACACTTATAAGTTATGTACTGCTTTATTTTATCGGACTGGGATTTGCAGTGTTTTTTAATGCAGCACTTGCCT GGTGCGGTTATTTTTACTTTTATTATTATGGAAGATCCCGCGCCGGAATTACTTTAGAATTCCTGACAGGAGTTTTTCTT CTCACAGCATTTTTACTCTTTGCAGATTATGGTGTTTATGCTTTGGTGCAGTATCAAAAAACAGCACTATTTAACGGTTT GTATTTTTCAATCTGGTTAACCATTCTGCTGGGAACGCCAATAGTTTATTATACTTATTATTTCGGGTCGCATTATTATG CAAAAGTTCGTTTGGCTAATACTTATTTAAAAGCCTCATTTAGTGTTTATCACGACAGAGAACATCTTATGTATATTGAT TCGATTGCCTTTATAAATTCGGGTAAACATTTAATTTCTGATATAGAAGTAGAAAATAATATTCCATTTTATTCAGATCA AGAATTAGCAGAAATGGAAATATCTTCTAAATATTATCATTTGCAGCAATCTGCTTTTTCAGGTTTAATTCATATTCCTT TTGATACAGATCGTTTTGAAATTTCATGGTATTCTATAATCGAAGATCAATATTATAAAATCAATATTCCTTTCCCTTTT AATAAATTAAAACTCGAAGAAGAGAAATATCCTTTGAATGAATCCAAAAACATTAGAGGACAAAAAATAAAACGCACTTA TCTTCATATTTATCTAAACGGAGGTTTTAAATTATATAATGATGACAAGGTTTTGCTTGACTTTTCGACTAATAAACCAA CCGAAATAAGTGAAGAAGAAAAGAATGAAAAAATTATAACACATCAGCTTAGTCATAAATATTATAATAACAAAGAGCAT TTTTCTCAGTTAATTGAAAGCATCAGAAAATCAAATAATATTCAGGAACGTTTCGAACTGAAAGATAAATCAGTAATTTG GAATTTAGAGTTTTCAGGTTTAGATGAAAATCATTATTTGGAAATTACCGACATAAATTTTAGAAATTACAAGATAGAAA AAGCTGCAGCAGAAATTTCACCGCGTTATCTGCCTAAAAAAATCACATTTGTTTATAGAGGTTCCTATTTATTTCCGTGG CTGAAACTGCACATAAATACACAAAAACTAAATCAGTTTATTGAACAGGTTTTACCTGATGATTTTGAAAACAGGGTTTT GTTTTCTCTTGATTTTAAAGACAGTAATCCAAAAGATCTTGTTTTTACAATTTCTTCCAATGCAAAAAAAGTTCTTTTTA AGGATTGGGAAATTGAAATTGATGAATACCGCAAAAAGGAAATGGACGAAGAACTGCTTGAAAAAAGAATGGACAATACA AAACGTACACTTTTAAAAGAAGGCTGGGATTTTGTTTTTGCGAAAAATTATAAAGCCGCCCAAAAGAATTGCGAAGCTTT ACAAGTTATAGATCCTCAATATGCATCGGCTTATTTTCTGGAAGCACGAATACTTTGGTATACAAAAGGTTTTGAAACTT GTTACAGTAAAAGAGATTACTTTATTGCAAAAACGGAACATGAACCACCGGTTAATGCTCTTATTTACAATAATTACGGT TGTATTTTAGATCGGGAACTGCGTTATGAAGAATCACTTCCTTATTTTGAAAAAGCAATCGAAATAAATCCTAAAGAACC CATTTTTGTCTGCAATCTGGGAGAAATGTATTATAAACTAAAAGATCCGGCAAAAGCTTTAAAAGAAGCTAGAAAAGCTA AAATGATGGGCTATGAATCTGATATGTTATCTGAAATTTTAATGAACAAGGGAATAATTGATTTGATAAATCATTAA
Upstream 100 bases:
>100_bases TTCTGTTTTTTTTTGAATATTACTTTTTAAAAATCACTATTTATGATGACTTATGTGGTTTAGCGAACCTTTACATTTGC TTTTTTAACTCAAGAATATC
Downstream 100 bases:
>100_bases AGTAAAAATCACTATTTATAGTGATGCAGGAAATAAATCCGGAAGATACATTTGCCAGCGTAATTAATAACTAAAATCAA TATGGGATTAGCAGAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 638; Mature: 638
Protein sequence:
>638_residues MKTYRSYKKVDPVYFSGEIFFPVGLLCAATLISYVLLYFIGLGFAVFFNAALAWCGYFYFYYYGRSRAGITLEFLTGVFL LTAFLLFADYGVYALVQYQKTALFNGLYFSIWLTILLGTPIVYYTYYFGSHYYAKVRLANTYLKASFSVYHDREHLMYID SIAFINSGKHLISDIEVENNIPFYSDQELAEMEISSKYYHLQQSAFSGLIHIPFDTDRFEISWYSIIEDQYYKINIPFPF NKLKLEEEKYPLNESKNIRGQKIKRTYLHIYLNGGFKLYNDDKVLLDFSTNKPTEISEEEKNEKIITHQLSHKYYNNKEH FSQLIESIRKSNNIQERFELKDKSVIWNLEFSGLDENHYLEITDINFRNYKIEKAAAEISPRYLPKKITFVYRGSYLFPW LKLHINTQKLNQFIEQVLPDDFENRVLFSLDFKDSNPKDLVFTISSNAKKVLFKDWEIEIDEYRKKEMDEELLEKRMDNT KRTLLKEGWDFVFAKNYKAAQKNCEALQVIDPQYASAYFLEARILWYTKGFETCYSKRDYFIAKTEHEPPVNALIYNNYG CILDRELRYEESLPYFEKAIEINPKEPIFVCNLGEMYYKLKDPAKALKEARKAKMMGYESDMLSEILMNKGIIDLINH
Sequences:
>Translated_638_residues MKTYRSYKKVDPVYFSGEIFFPVGLLCAATLISYVLLYFIGLGFAVFFNAALAWCGYFYFYYYGRSRAGITLEFLTGVFL LTAFLLFADYGVYALVQYQKTALFNGLYFSIWLTILLGTPIVYYTYYFGSHYYAKVRLANTYLKASFSVYHDREHLMYID SIAFINSGKHLISDIEVENNIPFYSDQELAEMEISSKYYHLQQSAFSGLIHIPFDTDRFEISWYSIIEDQYYKINIPFPF NKLKLEEEKYPLNESKNIRGQKIKRTYLHIYLNGGFKLYNDDKVLLDFSTNKPTEISEEEKNEKIITHQLSHKYYNNKEH FSQLIESIRKSNNIQERFELKDKSVIWNLEFSGLDENHYLEITDINFRNYKIEKAAAEISPRYLPKKITFVYRGSYLFPW LKLHINTQKLNQFIEQVLPDDFENRVLFSLDFKDSNPKDLVFTISSNAKKVLFKDWEIEIDEYRKKEMDEELLEKRMDNT KRTLLKEGWDFVFAKNYKAAQKNCEALQVIDPQYASAYFLEARILWYTKGFETCYSKRDYFIAKTEHEPPVNALIYNNYG CILDRELRYEESLPYFEKAIEINPKEPIFVCNLGEMYYKLKDPAKALKEARKAKMMGYESDMLSEILMNKGIIDLINH >Mature_638_residues MKTYRSYKKVDPVYFSGEIFFPVGLLCAATLISYVLLYFIGLGFAVFFNAALAWCGYFYFYYYGRSRAGITLEFLTGVFL LTAFLLFADYGVYALVQYQKTALFNGLYFSIWLTILLGTPIVYYTYYFGSHYYAKVRLANTYLKASFSVYHDREHLMYID SIAFINSGKHLISDIEVENNIPFYSDQELAEMEISSKYYHLQQSAFSGLIHIPFDTDRFEISWYSIIEDQYYKINIPFPF NKLKLEEEKYPLNESKNIRGQKIKRTYLHIYLNGGFKLYNDDKVLLDFSTNKPTEISEEEKNEKIITHQLSHKYYNNKEH FSQLIESIRKSNNIQERFELKDKSVIWNLEFSGLDENHYLEITDINFRNYKIEKAAAEISPRYLPKKITFVYRGSYLFPW LKLHINTQKLNQFIEQVLPDDFENRVLFSLDFKDSNPKDLVFTISSNAKKVLFKDWEIEIDEYRKKEMDEELLEKRMDNT KRTLLKEGWDFVFAKNYKAAQKNCEALQVIDPQYASAYFLEARILWYTKGFETCYSKRDYFIAKTEHEPPVNALIYNNYG CILDRELRYEESLPYFEKAIEINPKEPIFVCNLGEMYYKLKDPAKALKEARKAKMMGYESDMLSEILMNKGIIDLINH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75638; Mature: 75638
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYRSYKKVDPVYFSGEIFFPVGLLCAATLISYVLLYFIGLGFAVFFNAALAWCGYFYF CCCCCCHHCCCCEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYYGRSRAGITLEFLTGVFLLTAFLLFADYGVYALVQYQKTALFNGLYFSIWLTILLGTP HEECCCCCCEEHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHCHHHHHHHHHHHHCCC IVYYTYYFGSHYYAKVRLANTYLKASFSVYHDREHLMYIDSIAFINSGKHLISDIEVENN CEEEEEECCCEEEEEEEEEEHEEEEEEEEEECCCCEEEEEEEEEECCCCHHHEEEEECCC IPFYSDQELAEMEISSKYYHLQQSAFSGLIHIPFDTDRFEISWYSIIEDQYYKINIPFPF CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEEECCCEEEEECCCCC NKLKLEEEKYPLNESKNIRGQKIKRTYLHIYLNGGFKLYNDDKVLLDFSTNKPTEISEEE CCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCEEEECCCEEEEEECCCCCCCCCCHH KNEKIITHQLSHKYYNNKEHFSQLIESIRKSNNIQERFELKDKSVIWNLEFSGLDENHYL CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCCEE EITDINFRNYKIEKAAAEISPRYLPKKITFVYRGSYLFPWLKLHINTQKLNQFIEQVLPD EEEECCCCCEEEHHHHHHCCCCCCCCEEEEEEECCEECEEEEEEEEHHHHHHHHHHHCCC DFENRVLFSLDFKDSNPKDLVFTISSNAKKVLFKDWEIEIDEYRKKEMDEELLEKRMDNT CCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECEEEHHHHHHHHHHHHHHHHHHCHH KRTLLKEGWDFVFAKNYKAAQKNCEALQVIDPQYASAYFLEARILWYTKGFETCYSKRDY HHHHHHCCCCEEEECCCHHHHCCCCEEEEECCCHHCEEEEEEEEEEEECCHHHHHCCCCE FIAKTEHEPPVNALIYNNYGCILDRELRYEESLPYFEKAIEINPKEPIFVCNLGEMYYKL EEEECCCCCCCCEEEECCCCEEEECCCCCCCCCCHHHHHEECCCCCCEEEEECHHHHHHH KDPAKALKEARKAKMMGYESDMLSEILMNKGIIDLINH CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure MKTYRSYKKVDPVYFSGEIFFPVGLLCAATLISYVLLYFIGLGFAVFFNAALAWCGYFYF CCCCCCHHCCCCEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYYGRSRAGITLEFLTGVFLLTAFLLFADYGVYALVQYQKTALFNGLYFSIWLTILLGTP HEECCCCCCEEHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHCHHHHHHHHHHHHCCC IVYYTYYFGSHYYAKVRLANTYLKASFSVYHDREHLMYIDSIAFINSGKHLISDIEVENN CEEEEEECCCEEEEEEEEEEHEEEEEEEEEECCCCEEEEEEEEEECCCCHHHEEEEECCC IPFYSDQELAEMEISSKYYHLQQSAFSGLIHIPFDTDRFEISWYSIIEDQYYKINIPFPF CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEEECCCEEEEECCCCC NKLKLEEEKYPLNESKNIRGQKIKRTYLHIYLNGGFKLYNDDKVLLDFSTNKPTEISEEE CCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCEEEECCCEEEEEECCCCCCCCCCHH KNEKIITHQLSHKYYNNKEHFSQLIESIRKSNNIQERFELKDKSVIWNLEFSGLDENHYL CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCCEE EITDINFRNYKIEKAAAEISPRYLPKKITFVYRGSYLFPWLKLHINTQKLNQFIEQVLPD EEEECCCCCEEEHHHHHHCCCCCCCCEEEEEEECCEECEEEEEEEEHHHHHHHHHHHCCC DFENRVLFSLDFKDSNPKDLVFTISSNAKKVLFKDWEIEIDEYRKKEMDEELLEKRMDNT CCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECEEEHHHHHHHHHHHHHHHHHHCHH KRTLLKEGWDFVFAKNYKAAQKNCEALQVIDPQYASAYFLEARILWYTKGFETCYSKRDY HHHHHHCCCCEEEECCCHHHHCCCCEEEEECCCHHCEEEEEEEEEEEECCHHHHHCCCCE FIAKTEHEPPVNALIYNNYGCILDRELRYEESLPYFEKAIEINPKEPIFVCNLGEMYYKL EEEECCCCCCCCEEEECCCCEEEECCCCCCCCCCHHHHHEECCCCCCEEEEECHHHHHHH KDPAKALKEARKAKMMGYESDMLSEILMNKGIIDLINH CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA