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The map label for this gene is yliI [H]

Identifier: 146301051

GI number: 146301051

Start: 3950703

End: 3951929

Strand: Reverse

Name: yliI [H]

Synonym: Fjoh_3307

Alternate gene names: 146301051

Gene position: 3951929-3950703 (Counterclockwise)

Preceding gene: 146301052

Following gene: 146301050

Centisome position: 64.82

GC content: 41.56

Gene sequence:

>1227_bases
ATGAAAAATTTAAAGTACATTTTTATTCTTTCGAGTGCATTATTTGCCTTTAGCTGCAACAACGATGATACTCCTGCAAA
CGGAGGCGGAACAGTAACAGATCCTGTAGAAACTAATCCTGCAAATACTCAATATAAACCTGCATTTAACGGACAAACCA
GAATTGCTGGTATGACGACTGATACAGAATTTAAAGCTGATATTATTACAAGTGCACTAACAAGTCCGTGGGGCGTTAAA
GCGCTTCCTGACGGTCGTCTTTTGGTGACTCAAAAAACAACAGGAACTTTACGTATTGTAACAACTGCCGGAGTGGTAAG
TGAACCAATTACGGGTCTTCCGGCTGTAAATCCTGCTAATCAGGGAGGTTTGTTAGGTTTATGTCTTGATCCGGATTTTG
CATCGAACAGAATGATTTACTGGGTATTTTCTGAAGCTGTAACAGGTGGAAATATTTCATCTGTAGCCAAAGGAAAACTG
GCTGCTAACGAAAAAACAATCGAAAATGCAACGGTTATTTACCGCTCAAGCCCTGCAAATCCTAGTGATCTTCATTATGG
CGGACGTATTCTTTTTGACCAGACAGGAAATCTTATTGTTAGTACTGGAGAACGTTCGGTTTTACAAACCCGACCTTTGG
CGCAGTCGCTTACAGCAAGTTTAGGTAAAGTTTTAAGAATTACAAAAGACGGACAGCCGGCTTCTGGAAATCCAACTTTT
AGCGGTGCCGGAGCTTTACCTGAGCTGTACACATACGGACATAGAAATCCGCAGGGATTAGCAATTCACCCGGTTACAAA
AGAGATCTGGCAAAGTGAACACGGACCAAGAGGAGGTGATGAGTTGAACCGTTTAAAAGCAGGTTCTAATTACGGATGGC
CGACTATTACTTATGGAATTGAATACAGCGGTGATCCAATTGGTGACGCTATCCAGCAGAAAGAAGGAATGGAACAGCCG
GTTTATTACTGGGATCCGGTTATTTCTCCAAGCGGTATGACTTTTTACACAGGAAATCGTGTGCCGGAATGGGAAAACAA
CCTTTTCATTGGTTCTTTAAGTGGTCAGCATATTGCAAGATTGGTAATTAAAGACAATAAAGTTGTGGGAGAAGAAAGAC
TTCTGGCAGGCGAAGGCCAGCGTTTTAGAGATATAACGCAAGGAGGCGATGGAGCTTTATATGCCGTAACAGATCAGGGA
AGACTTTATAAAATAGATAAGAAATAA

Upstream 100 bases:

>100_bases
AAGAATTCTGTAAGTCTTTCCTTAAATTATATAAAATAAGCCGTTTTTAATTTTAGACATTTGACGCTTATAACCCAAAT
TAATTTAATAAATAACTACT

Downstream 100 bases:

>100_bases
ATTGTTGATGGTTAATTGTTGATGGTTAATTGTTGATGGTTGATTGTTAATGGTTAATTATCTTATAAATTTAGAAATGG
CGCTTTTTGCGCCATTTTTG

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MKNLKYIFILSSALFAFSCNNDDTPANGGGTVTDPVETNPANTQYKPAFNGQTRIAGMTTDTEFKADIITSALTSPWGVK
ALPDGRLLVTQKTTGTLRIVTTAGVVSEPITGLPAVNPANQGGLLGLCLDPDFASNRMIYWVFSEAVTGGNISSVAKGKL
AANEKTIENATVIYRSSPANPSDLHYGGRILFDQTGNLIVSTGERSVLQTRPLAQSLTASLGKVLRITKDGQPASGNPTF
SGAGALPELYTYGHRNPQGLAIHPVTKEIWQSEHGPRGGDELNRLKAGSNYGWPTITYGIEYSGDPIGDAIQQKEGMEQP
VYYWDPVISPSGMTFYTGNRVPEWENNLFIGSLSGQHIARLVIKDNKVVGEERLLAGEGQRFRDITQGGDGALYAVTDQG
RLYKIDKK

Sequences:

>Translated_408_residues
MKNLKYIFILSSALFAFSCNNDDTPANGGGTVTDPVETNPANTQYKPAFNGQTRIAGMTTDTEFKADIITSALTSPWGVK
ALPDGRLLVTQKTTGTLRIVTTAGVVSEPITGLPAVNPANQGGLLGLCLDPDFASNRMIYWVFSEAVTGGNISSVAKGKL
AANEKTIENATVIYRSSPANPSDLHYGGRILFDQTGNLIVSTGERSVLQTRPLAQSLTASLGKVLRITKDGQPASGNPTF
SGAGALPELYTYGHRNPQGLAIHPVTKEIWQSEHGPRGGDELNRLKAGSNYGWPTITYGIEYSGDPIGDAIQQKEGMEQP
VYYWDPVISPSGMTFYTGNRVPEWENNLFIGSLSGQHIARLVIKDNKVVGEERLLAGEGQRFRDITQGGDGALYAVTDQG
RLYKIDKK
>Mature_408_residues
MKNLKYIFILSSALFAFSCNNDDTPANGGGTVTDPVETNPANTQYKPAFNGQTRIAGMTTDTEFKADIITSALTSPWGVK
ALPDGRLLVTQKTTGTLRIVTTAGVVSEPITGLPAVNPANQGGLLGLCLDPDFASNRMIYWVFSEAVTGGNISSVAKGKL
AANEKTIENATVIYRSSPANPSDLHYGGRILFDQTGNLIVSTGERSVLQTRPLAQSLTASLGKVLRITKDGQPASGNPTF
SGAGALPELYTYGHRNPQGLAIHPVTKEIWQSEHGPRGGDELNRLKAGSNYGWPTITYGIEYSGDPIGDAIQQKEGMEQP
VYYWDPVISPSGMTFYTGNRVPEWENNLFIGSLSGQHIARLVIKDNKVVGEERLLAGEGQRFRDITQGGDGALYAVTDQG
RLYKIDKK

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI124248546, Length=198, Percent_Identity=29.7979797979798, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI1787060, Length=347, Percent_Identity=37.7521613832853, Blast_Score=251, Evalue=5e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 43887; Mature: 43887

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLKYIFILSSALFAFSCNNDDTPANGGGTVTDPVETNPANTQYKPAFNGQTRIAGMTT
CCCCEEEEEEECEEEEEECCCCCCCCCCCCEECCCCCCCCCCCEECCCCCCCEEEEEECC
DTEFKADIITSALTSPWGVKALPDGRLLVTQKTTGTLRIVTTAGVVSEPITGLPAVNPAN
CCCHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCEEEEEEECCCHHCCCCCCCCCCCCC
QGGLLGLCLDPDFASNRMIYWVFSEAVTGGNISSVAKGKLAANEKTIENATVIYRSSPAN
CCCEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCC
PSDLHYGGRILFDQTGNLIVSTGERSVLQTRPLAQSLTASLGKVLRITKDGQPASGNPTF
CCCCCCCCEEEEECCCCEEEECCCCCHHHHCCHHHHHHHHHHHEEEEECCCCCCCCCCCC
SGAGALPELYTYGHRNPQGLAIHPVTKEIWQSEHGPRGGDELNRLKAGSNYGWPTITYGI
CCCCCCCHHHHCCCCCCCCEEEECCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCEEEEEE
EYSGDPIGDAIQQKEGMEQPVYYWDPVISPSGMTFYTGNRVPEWENNLFIGSLSGQHIAR
EECCCCHHHHHHHHCCCCCCCEEECCEECCCCCEEEECCCCCCCCCCEEEECCCCCEEEE
LVIKDNKVVGEERLLAGEGQRFRDITQGGDGALYAVTDQGRLYKIDKK
EEEECCCEECCHHEECCCCCHHHHHHCCCCCEEEEEECCCEEEEECCC
>Mature Secondary Structure
MKNLKYIFILSSALFAFSCNNDDTPANGGGTVTDPVETNPANTQYKPAFNGQTRIAGMTT
CCCCEEEEEEECEEEEEECCCCCCCCCCCCEECCCCCCCCCCCEECCCCCCCEEEEEECC
DTEFKADIITSALTSPWGVKALPDGRLLVTQKTTGTLRIVTTAGVVSEPITGLPAVNPAN
CCCHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCEEEEEEECCCHHCCCCCCCCCCCCC
QGGLLGLCLDPDFASNRMIYWVFSEAVTGGNISSVAKGKLAANEKTIENATVIYRSSPAN
CCCEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCC
PSDLHYGGRILFDQTGNLIVSTGERSVLQTRPLAQSLTASLGKVLRITKDGQPASGNPTF
CCCCCCCCEEEEECCCCEEEECCCCCHHHHCCHHHHHHHHHHHEEEEECCCCCCCCCCCC
SGAGALPELYTYGHRNPQGLAIHPVTKEIWQSEHGPRGGDELNRLKAGSNYGWPTITYGI
CCCCCCCHHHHCCCCCCCCEEEECCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCEEEEEE
EYSGDPIGDAIQQKEGMEQPVYYWDPVISPSGMTFYTGNRVPEWENNLFIGSLSGQHIAR
EECCCCHHHHHHHHCCCCCCCEEECCEECCCCCEEEECCCCCCCCCCEEEECCCCCEEEE
LVIKDNKVVGEERLLAGEGQRFRDITQGGDGALYAVTDQGRLYKIDKK
EEEECCCEECCHHEECCCCCHHHHHHCCCCCEEEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]