| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is hisI [H]
Identifier: 146300620
GI number: 146300620
Start: 3408271
End: 3408867
Strand: Reverse
Name: hisI [H]
Synonym: Fjoh_2871
Alternate gene names: 146300620
Gene position: 3408867-3408271 (Counterclockwise)
Preceding gene: 146300621
Following gene: 146300619
Centisome position: 55.91
GC content: 36.18
Gene sequence:
>597_bases ATGGATATCGATATCAAAAGCGCACACGGATTAATTCCGGCTATAATTCAGGATTCTGAAACAAAAAATGTTTTGATGCT GGGTTATATGAACGAAGAATCGCTTCAAAAAACAATAGAAACTCAAAAAGTAACTTTCTTTAGTCGCTCTAAGCAAAGAC TTTGGACAAAAGGCGAGGAGAGCGGTAACTTTTTAAATCTGGTAAGCATTAAAAATGATTGTGACGGCGATACGCTATTA ATTCAGGCAAAACCAGTTGGACCAACGTGCCACACAGGCGCAGATACATGTTGGCAAGAACCCAATGATGCGAATTACGG TTTTATTTCACAATTAGAAAATACAATCAAAACCCGTAGAGAAAATGCTGATTCTGAACAGAGTTATGTAGCTTCTTTAT TTGCAAAAGGAATCAATAAAATTGCCCAAAAAGTTGGTGAAGAGGCAGTAGAAGTAGTTATTGAAGCAAAAGATAACAAC GATGATTTATTCCTCAGCGAAAGCGCCGATTTACTTTTTCATTATCTGATTTTACTGCAGGCAAAAGGTTATCAGTTAAA TGATGTTGTAGAAGTTTTAAAGAAACGTCAGAAGTAG
Upstream 100 bases:
>100_bases AGACTTTAAGAGAAGCAGGAAACAAGAAGAAAGAGAAGATTTAATCTAAAATAAAAGAGTTCAGCAATCTAAAATCTGAA TTCTAAAATCTAAAATAATT
Downstream 100 bases:
>100_bases TTATACTCAATATTTTCAATCTGAGTGAATTTGAAATACTGTAAAGTGATTTAATAAACTTGATTTCAACTTCGCTCAGT CTGATAAAAATATTTACTTT
Product: bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein
Products: NA
Alternate protein names: Phosphoribosyl-AMP cyclohydrolase; PRA-CH; Phosphoribosyl-ATP pyrophosphatase; PRA-PH [H]
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MDIDIKSAHGLIPAIIQDSETKNVLMLGYMNEESLQKTIETQKVTFFSRSKQRLWTKGEESGNFLNLVSIKNDCDGDTLL IQAKPVGPTCHTGADTCWQEPNDANYGFISQLENTIKTRRENADSEQSYVASLFAKGINKIAQKVGEEAVEVVIEAKDNN DDLFLSESADLLFHYLILLQAKGYQLNDVVEVLKKRQK
Sequences:
>Translated_198_residues MDIDIKSAHGLIPAIIQDSETKNVLMLGYMNEESLQKTIETQKVTFFSRSKQRLWTKGEESGNFLNLVSIKNDCDGDTLL IQAKPVGPTCHTGADTCWQEPNDANYGFISQLENTIKTRRENADSEQSYVASLFAKGINKIAQKVGEEAVEVVIEAKDNN DDLFLSESADLLFHYLILLQAKGYQLNDVVEVLKKRQK >Mature_198_residues MDIDIKSAHGLIPAIIQDSETKNVLMLGYMNEESLQKTIETQKVTFFSRSKQRLWTKGEESGNFLNLVSIKNDCDGDTLL IQAKPVGPTCHTGADTCWQEPNDANYGFISQLENTIKTRRENADSEQSYVASLFAKGINKIAQKVGEEAVEVVIEAKDNN DDLFLSESADLLFHYLILLQAKGYQLNDVVEVLKKRQK
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PRA-PH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=197, Percent_Identity=50.761421319797, Blast_Score=207, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6319819, Length=183, Percent_Identity=34.4262295081967, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023019 - InterPro: IPR008179 - InterPro: IPR021130 - InterPro: IPR002496 - ProDom: PD002610 [H]
Pfam domain/function: PF01502 PRA-CH; PF01503 PRA-PH [H]
EC number: =3.5.4.19; =3.6.1.31 [H]
Molecular weight: Translated: 22230; Mature: 22230
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIDIKSAHGLIPAIIQDSETKNVLMLGYMNEESLQKTIETQKVTFFSRSKQRLWTKGEE CCCCCCCCCCCHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SGNFLNLVSIKNDCDGDTLLIQAKPVGPTCHTGADTCWQEPNDANYGFISQLENTIKTRR CCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHH ENADSEQSYVASLFAKGINKIAQKVGEEAVEVVIEAKDNNDDLFLSESADLLFHYLILLQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCHHHHHHHHHHHH AKGYQLNDVVEVLKKRQK CCCCCHHHHHHHHHHHCC >Mature Secondary Structure MDIDIKSAHGLIPAIIQDSETKNVLMLGYMNEESLQKTIETQKVTFFSRSKQRLWTKGEE CCCCCCCCCCCHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SGNFLNLVSIKNDCDGDTLLIQAKPVGPTCHTGADTCWQEPNDANYGFISQLENTIKTRR CCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHH ENADSEQSYVASLFAKGINKIAQKVGEEAVEVVIEAKDNNDDLFLSESADLLFHYLILLQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCHHHHHHHHHHHH AKGYQLNDVVEVLKKRQK CCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]