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The map label for this gene is 146300302

Identifier: 146300302

GI number: 146300302

Start: 3032460

End: 3033050

Strand: Direct

Name: 146300302

Synonym: Fjoh_2547

Alternate gene names: NA

Gene position: 3032460-3033050 (Clockwise)

Preceding gene: 146300296

Following gene: 146300303

Centisome position: 49.74

GC content: 29.95

Gene sequence:

>591_bases
ATGTCTAAAGCTGCCAATACCCGACTTACTATTCTTCATAAAGCATTTGAATTGATATACACTAAAGGATATCAAACTAC
TAGTGTTGATGAAATTATTGCAACTACTCAAGTTACAAAAGGAGCTTTTTATTATCATTTTAAAAATAAAGATGAAATGG
GAGTTGCAATTATAGAAGAAATTCTAAAGCCGACAATGCAGGAACATTTTATAAAACCAACTGAAGTTTCTCAAAATCCA
ATAGAAGATTTTTATAATATGATTTCATATCTGTTATTAGAAGATCCTTTTTTGCAGGTAAAATATGGCTGTCCGGTTGG
AAATCTTACTCAGGAAATGACGCCCTGGAATACTAAGTTTAGCGAAGCTTTGACTGAATTAGTCAATTTATGGAAAACTA
CAATTATAAATTCAATTGAAAAAGGTAAAGAATCTGGTTTGATTCGCAAAGATGTTATTGGTGAACAAGTAGCTTTTTTT
ATCCTTTCAGGCTATTGGGGAATACGAAATTTTGGAAAACTTCAAAATGATAATTCAGTATATCTTATTTATTTAGAAGA
GCTTAAGAAATATTTGGACGGTTTGAAATAA

Upstream 100 bases:

>100_bases
GTGAATTAAGAAAAAGTTTATATTTCTGTTTCTATGTGTTTAAATCAATTACACCAATTATTTTTCTTTAATTTGCTTTT
TCATACCAATTAGTATTTTT

Downstream 100 bases:

>100_bases
AATTATTTTTTAAAACATACTAATTAGTATGTTTTTTGAATATATTTGCATTGTCTAAATCAAAAAACAATGTATCAAAC
TCTTTTATCAGGCCATTCGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSKAANTRLTILHKAFELIYTKGYQTTSVDEIIATTQVTKGAFYYHFKNKDEMGVAIIEEILKPTMQEHFIKPTEVSQNP
IEDFYNMISYLLLEDPFLQVKYGCPVGNLTQEMTPWNTKFSEALTELVNLWKTTIINSIEKGKESGLIRKDVIGEQVAFF
ILSGYWGIRNFGKLQNDNSVYLIYLEELKKYLDGLK

Sequences:

>Translated_196_residues
MSKAANTRLTILHKAFELIYTKGYQTTSVDEIIATTQVTKGAFYYHFKNKDEMGVAIIEEILKPTMQEHFIKPTEVSQNP
IEDFYNMISYLLLEDPFLQVKYGCPVGNLTQEMTPWNTKFSEALTELVNLWKTTIINSIEKGKESGLIRKDVIGEQVAFF
ILSGYWGIRNFGKLQNDNSVYLIYLEELKKYLDGLK
>Mature_195_residues
SKAANTRLTILHKAFELIYTKGYQTTSVDEIIATTQVTKGAFYYHFKNKDEMGVAIIEEILKPTMQEHFIKPTEVSQNPI
EDFYNMISYLLLEDPFLQVKYGCPVGNLTQEMTPWNTKFSEALTELVNLWKTTIINSIEKGKESGLIRKDVIGEQVAFFI
LSGYWGIRNFGKLQNDNSVYLIYLEELKKYLDGLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22599; Mature: 22468

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAANTRLTILHKAFELIYTKGYQTTSVDEIIATTQVTKGAFYYHFKNKDEMGVAIIEE
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH
ILKPTMQEHFIKPTEVSQNPIEDFYNMISYLLLEDPFLQVKYGCPVGNLTQEMTPWNTKF
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCHH
SEALTELVNLWKTTIINSIEKGKESGLIRKDVIGEQVAFFILSGYWGIRNFGKLQNDNSV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
YLIYLEELKKYLDGLK
EEEEHHHHHHHHCCCC
>Mature Secondary Structure 
SKAANTRLTILHKAFELIYTKGYQTTSVDEIIATTQVTKGAFYYHFKNKDEMGVAIIEE
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH
ILKPTMQEHFIKPTEVSQNPIEDFYNMISYLLLEDPFLQVKYGCPVGNLTQEMTPWNTKF
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCHH
SEALTELVNLWKTTIINSIEKGKESGLIRKDVIGEQVAFFILSGYWGIRNFGKLQNDNSV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
YLIYLEELKKYLDGLK
EEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339371 [H]