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The map label for this gene is rdxB [H]

Identifier: 146300294

GI number: 146300294

Start: 3024906

End: 3026324

Strand: Direct

Name: rdxB [H]

Synonym: Fjoh_2539

Alternate gene names: 146300294

Gene position: 3024906-3026324 (Clockwise)

Preceding gene: 146300293

Following gene: 146300295

Centisome position: 49.61

GC content: 34.18

Gene sequence:

>1419_bases
ATGTCAAATTTACCAGACGAAGCTTTTAGAGATACCATTGGAACAATAGATGAAGGTGGTAAAAGGAAATTTATTTTTCC
CAAAAAACCGTCTGGTAAATTTTATGATTACCGCAAAATAGTCAGTTATGTTTTGCTGGCAATTTTAGTCATAAATCCGT
TTATAAAAGTAAACGGAAACCAGTTTATGATGTTCAATATCATTGAACGTCGTTTTAATATCTTCGGATTTCCGTTTTGG
CCGCAAGATTTTTACCTCTTCGTAATTTCAATGCTTGTAGGCGTTGTATTTATAATCTTATTTACCGTTGTTTTTGGCCG
AATATTTTGCGGCTGGATTTGTCCGCAGACCATCTTTCTTGAAATGGTTTTTCGCCGGATAGAATATTGGATTGACGGTG
ACCGCGGTTCACAATCACGTTTGGCAAGACAGGAATGGAATGCCGAAAAAATAAGAAAGAGATTGATTAAGTGGACGATT
TTCTTTATAATTTCTTTCGCTATTGCAAATGTCTTTTTAGCTTATTTGGTAGGAAGTGATGCTTTGCTGCTAATGATTGA
ACAAGGCCCAATTCAGCAGGCAAGCAATTTTATTGCACTTTTAATTTTTACCGGAGTTTTCTACTTTGTTTTTGTGTGGT
TTCGTGAGCAGGTTTGTATCATTGCCTGTCCTTATGGAAGATTGCAAGGCGTTCTTTTAGATAATAAATCAATCAATGTA
GCGTATGATTTTGTTAGAGGAGAAAAAGAAGAAGGAAGAGCAAAGTTTAATAAAAAAGAAGACAGAGCTTTAACCGGAAA
AGGAGATTGTATTGATTGTCTTCAATGTGTTCATGTCTGCCCAATGGGAATTGACATTAGAAACGGAACTCAGTTAGAAT
GTACAAACTGTACAGCTTGTATTGACGAATGTGATCATATTATGGAAAGTGTAGGACTGCCAAAAGGACTTATACGTTAT
GCGTCAGAAGATGAAATCGTTAAAAAAGAACCTTTTAAGTTCACTGCCAGAATGAAAGGCTACAGTGCAGTTTTATTTAT
ATTATTGAGTATTTTTGTTGGAATGTTGTTTCTCAGAACTGATCTTCAGGCTGTTGTTTTACGTTTGCCAGGGCAGCTTT
TTCAACATAAAGGAGAAAAAATAAGCAACGTTTATACTTATAAAATTGTCAACAAGACAATGAAAGATTACAACGATATT
CATTTTGAATTAATCGATCAAAAAGGTGAAATTAGAAATGTAGGAAAACAGCATTTTAAAGTACCAAAAGAAGGGATTTC
TCAAGGAACATTGTTTATAGAAATTGATGAAGTACTGTTGGAAAGTGATAAAACTAATGTAAAAATTGGTGTGTACAACG
GCAAAGAACTTCTAGAAACTACCAAAACAAATTTCTTAGGACCACGAAGTTTTAATTAA

Upstream 100 bases:

>100_bases
AAGGTGAAGTTTGGGTAGACGAAAGTGCACCAATCAACGATGCAACCTCAGCTGCACCAAAAAAAGATACCACAGAAGTT
AAAAAATAAAATAGAATACC

Downstream 100 bases:

>100_bases
AATATATACCATCATGAAAATTAATTGGGGAACAGGAATTGTCATTGCATTTGCATTGTTTATGACCTTTATTTTATATT
TTGTTTTTGAAGTACAATCA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MSNLPDEAFRDTIGTIDEGGKRKFIFPKKPSGKFYDYRKIVSYVLLAILVINPFIKVNGNQFMMFNIIERRFNIFGFPFW
PQDFYLFVISMLVGVVFIILFTVVFGRIFCGWICPQTIFLEMVFRRIEYWIDGDRGSQSRLARQEWNAEKIRKRLIKWTI
FFIISFAIANVFLAYLVGSDALLLMIEQGPIQQASNFIALLIFTGVFYFVFVWFREQVCIIACPYGRLQGVLLDNKSINV
AYDFVRGEKEEGRAKFNKKEDRALTGKGDCIDCLQCVHVCPMGIDIRNGTQLECTNCTACIDECDHIMESVGLPKGLIRY
ASEDEIVKKEPFKFTARMKGYSAVLFILLSIFVGMLFLRTDLQAVVLRLPGQLFQHKGEKISNVYTYKIVNKTMKDYNDI
HFELIDQKGEIRNVGKQHFKVPKEGISQGTLFIEIDEVLLESDKTNVKIGVYNGKELLETTKTNFLGPRSFN

Sequences:

>Translated_472_residues
MSNLPDEAFRDTIGTIDEGGKRKFIFPKKPSGKFYDYRKIVSYVLLAILVINPFIKVNGNQFMMFNIIERRFNIFGFPFW
PQDFYLFVISMLVGVVFIILFTVVFGRIFCGWICPQTIFLEMVFRRIEYWIDGDRGSQSRLARQEWNAEKIRKRLIKWTI
FFIISFAIANVFLAYLVGSDALLLMIEQGPIQQASNFIALLIFTGVFYFVFVWFREQVCIIACPYGRLQGVLLDNKSINV
AYDFVRGEKEEGRAKFNKKEDRALTGKGDCIDCLQCVHVCPMGIDIRNGTQLECTNCTACIDECDHIMESVGLPKGLIRY
ASEDEIVKKEPFKFTARMKGYSAVLFILLSIFVGMLFLRTDLQAVVLRLPGQLFQHKGEKISNVYTYKIVNKTMKDYNDI
HFELIDQKGEIRNVGKQHFKVPKEGISQGTLFIEIDEVLLESDKTNVKIGVYNGKELLETTKTNFLGPRSFN
>Mature_471_residues
SNLPDEAFRDTIGTIDEGGKRKFIFPKKPSGKFYDYRKIVSYVLLAILVINPFIKVNGNQFMMFNIIERRFNIFGFPFWP
QDFYLFVISMLVGVVFIILFTVVFGRIFCGWICPQTIFLEMVFRRIEYWIDGDRGSQSRLARQEWNAEKIRKRLIKWTIF
FIISFAIANVFLAYLVGSDALLLMIEQGPIQQASNFIALLIFTGVFYFVFVWFREQVCIIACPYGRLQGVLLDNKSINVA
YDFVRGEKEEGRAKFNKKEDRALTGKGDCIDCLQCVHVCPMGIDIRNGTQLECTNCTACIDECDHIMESVGLPKGLIRYA
SEDEIVKKEPFKFTARMKGYSAVLFILLSIFVGMLFLRTDLQAVVLRLPGQLFQHKGEKISNVYTYKIVNKTMKDYNDIH
FELIDQKGEIRNVGKQHFKVPKEGISQGTLFIEIDEVLLESDKTNVKIGVYNGKELLETTKTNFLGPRSFN

Specific function: Involved in a membrane generated redox signal; required to maintain repression of photosynthesis gene expression in the presence of oxygen [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54420; Mature: 54288

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLPDEAFRDTIGTIDEGGKRKFIFPKKPSGKFYDYRKIVSYVLLAILVINPFIKVNGN
CCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCC
QFMMFNIIERRFNIFGFPFWPQDFYLFVISMLVGVVFIILFTVVFGRIFCGWICPQTIFL
EEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMVFRRIEYWIDGDRGSQSRLARQEWNAEKIRKRLIKWTIFFIISFAIANVFLAYLVGSD
HHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ALLLMIEQGPIQQASNFIALLIFTGVFYFVFVWFREQVCIIACPYGRLQGVLLDNKSINV
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHCEEEECCCCCEE
AYDFVRGEKEEGRAKFNKKEDRALTGKGDCIDCLQCVHVCPMGIDIRNGTQLECTNCTAC
EEHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCEEEECCHHHH
IDECDHIMESVGLPKGLIRYASEDEIVKKEPFKFTARMKGYSAVLFILLSIFVGMLFLRT
HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DLQAVVLRLPGQLFQHKGEKISNVYTYKIVNKTMKDYNDIHFELIDQKGEIRNVGKQHFK
HHHHHHHHCCHHHHHCCCCHHHHEEHHHHHHHHHHHCCCEEEEEECCCCHHHHHCHHHHC
VPKEGISQGTLFIEIDEVLLESDKTNVKIGVYNGKELLETTKTNFLGPRSFN
CCHHHCCCCEEEEEEHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SNLPDEAFRDTIGTIDEGGKRKFIFPKKPSGKFYDYRKIVSYVLLAILVINPFIKVNGN
CCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCC
QFMMFNIIERRFNIFGFPFWPQDFYLFVISMLVGVVFIILFTVVFGRIFCGWICPQTIFL
EEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMVFRRIEYWIDGDRGSQSRLARQEWNAEKIRKRLIKWTIFFIISFAIANVFLAYLVGSD
HHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ALLLMIEQGPIQQASNFIALLIFTGVFYFVFVWFREQVCIIACPYGRLQGVLLDNKSINV
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHCEEEECCCCCEE
AYDFVRGEKEEGRAKFNKKEDRALTGKGDCIDCLQCVHVCPMGIDIRNGTQLECTNCTAC
EEHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCEEEECCHHHH
IDECDHIMESVGLPKGLIRYASEDEIVKKEPFKFTARMKGYSAVLFILLSIFVGMLFLRT
HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DLQAVVLRLPGQLFQHKGEKISNVYTYKIVNKTMKDYNDIHFELIDQKGEIRNVGKQHFK
HHHHHHHHCCHHHHHCCCCHHHHEEHHHHHHHHHHHCCCEEEEEECCCCHHHHHCHHHHC
VPKEGISQGTLFIEIDEVLLESDKTNVKIGVYNGKELLETTKTNFLGPRSFN
CCHHHCCCCEEEEEEHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9068641; 7592416 [H]