| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300278
Identifier: 146300278
GI number: 146300278
Start: 3007591
End: 3008340
Strand: Direct
Name: 146300278
Synonym: Fjoh_2523
Alternate gene names: NA
Gene position: 3007591-3008340 (Clockwise)
Preceding gene: 146300277
Following gene: 146300280
Centisome position: 49.33
GC content: 31.2
Gene sequence:
>750_bases ATGAAAATCAGCGGATTGGTAATAACCTATAATGAGGAGAAAAATATAGGTAAATGTATAGATGCACTTTTTAGAATTTG TGATGAAGTAATCGTAATAGATTCATTAAGTGTTGATAATACAGTAAAAATTGCAGAAGAAAAAGGAGCTAAAGTTATCC CGCAGAAGTTTTTAGGCGATGGACCACAGCGAATTCATGGACTTCAATATTGTAAAAACGACTGGATTTTAAATCTGGAC GCAGATGAGATTTTAGCCGAAGATGCCGAAAAATTCATATTATCAGGAAAACATGAAAATCAAGATTTTGATGTCTATAC TTTTAGATTGTATAATTATCTGGGGGGTAAAAAAATAAATTTTGCAGGCTGGTATCCTGATAAAACAGCACGTTTTTTTA ATAAAAAAACAGCTTCTCCATCAAATGAGAGAGTTCATCAAAAAGTTTGCGAAAGCAATAAGACCCATTTAAATGTTCAT ATAAATCATTACGCTTGGGAAAATTTTGATCAATTTATCGCCAAGAAAAATTTATACACTACCTGGCATTCGCAGCAGCT TTATGATCAGGGAAAAAGAGTCAATGCTTTTAAACCTGTATTAAATGGAACAGTTTCTTTTATAAGATGCTATTTCTTTA AAAAAGGTTTTTTAAACGGATTGGATGGTATAACGTTTTCAATGATTCAGGCTTTTTTCTCTTACATGAAATATGCGAAG CTTTTGAAACTTCAGAAAAGTAATAAATAA
Upstream 100 bases:
>100_bases AATTATTTAGTAAAAAGAATTGACATAAAAGGAGAGGACAGTCTGTTTAGATTTAGGTTAAAATTAAAGATTGGAAAACT TAAATTATTTTAAATAATAC
Downstream 100 bases:
>100_bases TAAAAAATCCAAATTTCAATCGAAATTTGGATTTTTTATTGATTTTTAAAATCTATACTGCAACATCGTATTCGCGAAGT GCATTATTTAATGAAGTTTT
Product: glycosyl transferase family protein
Products: UDP; (1,4-beta-D-glucosyl)n+1
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKISGLVITYNEEKNIGKCIDALFRICDEVIVIDSLSVDNTVKIAEEKGAKVIPQKFLGDGPQRIHGLQYCKNDWILNLD ADEILAEDAEKFILSGKHENQDFDVYTFRLYNYLGGKKINFAGWYPDKTARFFNKKTASPSNERVHQKVCESNKTHLNVH INHYAWENFDQFIAKKNLYTTWHSQQLYDQGKRVNAFKPVLNGTVSFIRCYFFKKGFLNGLDGITFSMIQAFFSYMKYAK LLKLQKSNK
Sequences:
>Translated_249_residues MKISGLVITYNEEKNIGKCIDALFRICDEVIVIDSLSVDNTVKIAEEKGAKVIPQKFLGDGPQRIHGLQYCKNDWILNLD ADEILAEDAEKFILSGKHENQDFDVYTFRLYNYLGGKKINFAGWYPDKTARFFNKKTASPSNERVHQKVCESNKTHLNVH INHYAWENFDQFIAKKNLYTTWHSQQLYDQGKRVNAFKPVLNGTVSFIRCYFFKKGFLNGLDGITFSMIQAFFSYMKYAK LLKLQKSNK >Mature_249_residues MKISGLVITYNEEKNIGKCIDALFRICDEVIVIDSLSVDNTVKIAEEKGAKVIPQKFLGDGPQRIHGLQYCKNDWILNLD ADEILAEDAEKFILSGKHENQDFDVYTFRLYNYLGGKKINFAGWYPDKTARFFNKKTASPSNERVHQKVCESNKTHLNVH INHYAWENFDQFIAKKNLYTTWHSQQLYDQGKRVNAFKPVLNGTVSFIRCYFFKKGFLNGLDGITFSMIQAFFSYMKYAK LLKLQKSNK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.12
Molecular weight: Translated: 28869; Mature: 28869
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISGLVITYNEEKNIGKCIDALFRICDEVIVIDSLSVDNTVKIAEEKGAKVIPQKFLGD CCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCEEEEHHHCCCEECCHHHHCC GPQRIHGLQYCKNDWILNLDADEILAEDAEKFILSGKHENQDFDVYTFRLYNYLGGKKIN CHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHCCCEEE FAGWYPDKTARFFNKKTASPSNERVHQKVCESNKTHLNVHINHYAWENFDQFIAKKNLYT ECCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHCCCEE TWHSQQLYDQGKRVNAFKPVLNGTVSFIRCYFFKKGFLNGLDGITFSMIQAFFSYMKYAK CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LLKLQKSNK HHHHHCCCC >Mature Secondary Structure MKISGLVITYNEEKNIGKCIDALFRICDEVIVIDSLSVDNTVKIAEEKGAKVIPQKFLGD CCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCCEEEEHHHCCCEECCHHHHCC GPQRIHGLQYCKNDWILNLDADEILAEDAEKFILSGKHENQDFDVYTFRLYNYLGGKKIN CHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHCCCEEE FAGWYPDKTARFFNKKTASPSNERVHQKVCESNKTHLNVHINHYAWENFDQFIAKKNLYT ECCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHCCCEE TWHSQQLYDQGKRVNAFKPVLNGTVSFIRCYFFKKGFLNGLDGITFSMIQAFFSYMKYAK CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LLKLQKSNK HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-glucose; (1,4-beta-D-glucosyl)n
Specific reaction: UDP-glucose + (1,4-beta-D-glucosyl)n = UDP + (1,4-beta-D-glucosyl)n+1
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA