| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300226
Identifier: 146300226
GI number: 146300226
Start: 2957843
End: 2958823
Strand: Direct
Name: 146300226
Synonym: Fjoh_2471
Alternate gene names: NA
Gene position: 2957843-2958823 (Clockwise)
Preceding gene: 146300225
Following gene: 146300227
Centisome position: 48.51
GC content: 33.33
Gene sequence:
>981_bases ATGCCACAAAAAAAATTTGCCCTTATTTTCCTTTTATTAAATAGCATTTTTATCAATTTTACGTTTTCTCAAAAGATTAG CGAAGTCGATAAAATAGTTGCAAAATATCCTAAAAGTTTTGACAGCACCGAAAAGTTAGCAGAAAGAATCGAAAAAGATT TTGATTCAGATGCTGAGCGTGCACGCGCTATTTACGGCTGGATTGCCTTTAATATAAGATACGATTATAATGCGTATTTG AATCCGACGAGAGTGCAGGGATTTAGTTATTCTACAGAAGCAGAAAAACAGCGTAAAATCAAACAATTAAATGATAACCT CATTCAGAAAGCTTTCAAATCAAAGAAAGCAGTTTGTGAAGGTTTTACGGCTTTGTATCAGCATTTGGCTTCTCTAATGG GAATTAAATGCGAAATAATCCGCGGCGATTCTAAAATTTCAGTTAGAGATATCGGAAGAAAAACTACTTCATTCAATCAT GCCTGGAATATGGTTTTGATTGATAAAAAATGGCGCTTGATTGATGTGACCTGGGGACAAGGCTATTATGACAGCAGCAA AGGCAGAATGGTAAACGATTTTAATCCCGTTTACTTTGACACAGATCCGGATTACTTTTTTGCCAAACATTTTCCGGATT CCGGAACTTATTTAGGAGAAAGATTAAGTAAAGACGATTTTCTAAACGGTCCATTGATTTACAATACCACAATCGAAAAA GATTATAAAATTAAATCACCGGACTCTGGTATAATTGAAGCCAGAAATGGAGATAAGATTACGGTAGAAATCAAAAATCT CTCAAAATCCAATCAGGTTTTTTATTTAAATAAAAAGAATCAGCCGGTTAAAGTTCAAAACCCGAAAGAAAAAAGAGGAG GGTTAGAATTTCAAATTACTATAGATAACAATATTGGAGATTATATCACTGTTTTTGCAGATACGAACAGTGTTGTTTCT TTTAAAGTAGTTTCAAAATAA
Upstream 100 bases:
>100_bases ATTACCAGTATTTGGCTCGAATTTTGATTTACAGGAAAATAAAATTTCTAACGTTGAGTTAGATAATGAACTGAAAAACA TTATTAAATCAAATTTTTAA
Downstream 100 bases:
>100_bases TTTATTTAAGGATTATACAAATTTTAATCTTTTCTGAAATTGCCGTATCTTAGCAAGAATGATTCGAATTTGAACACTAT GGAAGCGACTTTTCTGAAAT
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: Transglutaminase DomaiN-Containing Protein; Transglutaminase; Transglutaminase Domain Protein
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MPQKKFALIFLLLNSIFINFTFSQKISEVDKIVAKYPKSFDSTEKLAERIEKDFDSDAERARAIYGWIAFNIRYDYNAYL NPTRVQGFSYSTEAEKQRKIKQLNDNLIQKAFKSKKAVCEGFTALYQHLASLMGIKCEIIRGDSKISVRDIGRKTTSFNH AWNMVLIDKKWRLIDVTWGQGYYDSSKGRMVNDFNPVYFDTDPDYFFAKHFPDSGTYLGERLSKDDFLNGPLIYNTTIEK DYKIKSPDSGIIEARNGDKITVEIKNLSKSNQVFYLNKKNQPVKVQNPKEKRGGLEFQITIDNNIGDYITVFADTNSVVS FKVVSK
Sequences:
>Translated_326_residues MPQKKFALIFLLLNSIFINFTFSQKISEVDKIVAKYPKSFDSTEKLAERIEKDFDSDAERARAIYGWIAFNIRYDYNAYL NPTRVQGFSYSTEAEKQRKIKQLNDNLIQKAFKSKKAVCEGFTALYQHLASLMGIKCEIIRGDSKISVRDIGRKTTSFNH AWNMVLIDKKWRLIDVTWGQGYYDSSKGRMVNDFNPVYFDTDPDYFFAKHFPDSGTYLGERLSKDDFLNGPLIYNTTIEK DYKIKSPDSGIIEARNGDKITVEIKNLSKSNQVFYLNKKNQPVKVQNPKEKRGGLEFQITIDNNIGDYITVFADTNSVVS FKVVSK >Mature_325_residues PQKKFALIFLLLNSIFINFTFSQKISEVDKIVAKYPKSFDSTEKLAERIEKDFDSDAERARAIYGWIAFNIRYDYNAYLN PTRVQGFSYSTEAEKQRKIKQLNDNLIQKAFKSKKAVCEGFTALYQHLASLMGIKCEIIRGDSKISVRDIGRKTTSFNHA WNMVLIDKKWRLIDVTWGQGYYDSSKGRMVNDFNPVYFDTDPDYFFAKHFPDSGTYLGERLSKDDFLNGPLIYNTTIEKD YKIKSPDSGIIEARNGDKITVEIKNLSKSNQVFYLNKKNQPVKVQNPKEKRGGLEFQITIDNNIGDYITVFADTNSVVSF KVVSK
Specific function: Unknown
COG id: COG5279
COG function: function code D; Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI148806932, Length=277, Percent_Identity=27.0758122743682, Blast_Score=107, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37603; Mature: 37472
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQKKFALIFLLLNSIFINFTFSQKISEVDKIVAKYPKSFDSTEKLAERIEKDFDSDAER CCCHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH ARAIYGWIAFNIRYDYNAYLNPTRVQGFSYSTEAEKQRKIKQLNDNLIQKAFKSKKAVCE HHEEEEEEEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFTALYQHLASLMGIKCEIIRGDSKISVRDIGRKTTSFNHAWNMVLIDKKWRLIDVTWGQ HHHHHHHHHHHHHCCEEEEEECCCEEEHHHCCCCCCCCCCEEEEEEEECCEEEEEEEECC GYYDSSKGRMVNDFNPVYFDTDPDYFFAKHFPDSGTYLGERLSKDDFLNGPLIYNTTIEK CEEECCCCCEEECCCCEEECCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCEEEEEECCC DYKIKSPDSGIIEARNGDKITVEIKNLSKSNQVFYLNKKNQPVKVQNPKEKRGGLEFQIT CEEECCCCCCEEEECCCCEEEEEEECCCCCCCEEEECCCCCCEECCCCHHHHCCEEEEEE IDNNIGDYITVFADTNSVVSFKVVSK ECCCCCCEEEEEECCCCEEEEEEECC >Mature Secondary Structure PQKKFALIFLLLNSIFINFTFSQKISEVDKIVAKYPKSFDSTEKLAERIEKDFDSDAER CCHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH ARAIYGWIAFNIRYDYNAYLNPTRVQGFSYSTEAEKQRKIKQLNDNLIQKAFKSKKAVCE HHEEEEEEEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFTALYQHLASLMGIKCEIIRGDSKISVRDIGRKTTSFNHAWNMVLIDKKWRLIDVTWGQ HHHHHHHHHHHHHCCEEEEEECCCEEEHHHCCCCCCCCCCEEEEEEEECCEEEEEEEECC GYYDSSKGRMVNDFNPVYFDTDPDYFFAKHFPDSGTYLGERLSKDDFLNGPLIYNTTIEK CEEECCCCCEEECCCCEEECCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCEEEEEECCC DYKIKSPDSGIIEARNGDKITVEIKNLSKSNQVFYLNKKNQPVKVQNPKEKRGGLEFQIT CEEECCCCCCEEEECCCCEEEEEEECCCCCCCEEEECCCCCCEECCCCHHHHCCEEEEEE IDNNIGDYITVFADTNSVVSFKVVSK ECCCCCCEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA