| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300213
Identifier: 146300213
GI number: 146300213
Start: 2943790
End: 2944224
Strand: Reverse
Name: 146300213
Synonym: Fjoh_2458
Alternate gene names: NA
Gene position: 2944224-2943790 (Counterclockwise)
Preceding gene: 146300214
Following gene: 146300212
Centisome position: 48.29
GC content: 30.57
Gene sequence:
>435_bases ATGAAAAAATATATTTCCATATTAATCCTTCTGCTTATTATAATTGCGTGTTCGACAACCTCGCAGACTATTGCCAATAA TGATAGTACTTCTGCAAAAAAAATAAACGATACGGTTAGAATTGCAAATGATTCTCTTGAATATGAAGTAATAATTATCG ATAACGGCTTTAGCACCTGGCTTGCATCAAGAGCATATCCTAGAAATTATTATTCATTGCAGTACCTTGAAAATAAAAAC TATTTGTACGTAACAGAATGGAACAATCGTGTCTTACAGCCGCAGCGTTATAATCCAAATTTATACGAAATGTCAATAAA CTACAGACCAGACATTCATTACGGATATGAAGTAAATTATCTAATTTATAATTATATGATTTATTTTCAAAATACTTACA AACAAAAGCTTTGGGGTAACGTTCCTTCAAGATAA
Upstream 100 bases:
>100_bases AATTATATAAATCTCTAACACTGCTAAACCTCTTTATAAACTGTTAAATAACACTTCTCTTTCCTCAATAAATCGTAACT TTAAATCTTCAAGAATAGTC
Downstream 100 bases:
>100_bases TATACTATATTTGTAATCATTACAAATAACAATGAATAGATTAAAAAAACGCTGGGGAATTACCTCAAATTTACAAGCCA TTATTATACTTACCGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKKYISILILLLIIIACSTTSQTIANNDSTSAKKINDTVRIANDSLEYEVIIIDNGFSTWLASRAYPRNYYSLQYLENKN YLYVTEWNNRVLQPQRYNPNLYEMSINYRPDIHYGYEVNYLIYNYMIYFQNTYKQKLWGNVPSR
Sequences:
>Translated_144_residues MKKYISILILLLIIIACSTTSQTIANNDSTSAKKINDTVRIANDSLEYEVIIIDNGFSTWLASRAYPRNYYSLQYLENKN YLYVTEWNNRVLQPQRYNPNLYEMSINYRPDIHYGYEVNYLIYNYMIYFQNTYKQKLWGNVPSR >Mature_144_residues MKKYISILILLLIIIACSTTSQTIANNDSTSAKKINDTVRIANDSLEYEVIIIDNGFSTWLASRAYPRNYYSLQYLENKN YLYVTEWNNRVLQPQRYNPNLYEMSINYRPDIHYGYEVNYLIYNYMIYFQNTYKQKLWGNVPSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17218; Mature: 17218
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYISILILLLIIIACSTTSQTIANNDSTSAKKINDTVRIANDSLEYEVIIIDNGFSTW CHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEECCCCEEEEEEEECCHHHH LASRAYPRNYYSLQYLENKNYLYVTEWNNRVLQPQRYNPNLYEMSINYRPDIHYGYEVNY HHCCCCCCCCEEEEEEECCCEEEEECCCCCEECCCCCCCCEEEEEECCCCCEECCEEEEE LIYNYMIYFQNTYKQKLWGNVPSR EEEEEEEEEECCHHHHHCCCCCCC >Mature Secondary Structure MKKYISILILLLIIIACSTTSQTIANNDSTSAKKINDTVRIANDSLEYEVIIIDNGFSTW CHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEECCCCEEEEEEEECCHHHH LASRAYPRNYYSLQYLENKNYLYVTEWNNRVLQPQRYNPNLYEMSINYRPDIHYGYEVNY HHCCCCCCCCEEEEEEECCCEEEEECCCCCEECCCCCCCCEEEEEECCCCCEECCEEEEE LIYNYMIYFQNTYKQKLWGNVPSR EEEEEEEEEECCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA