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The map label for this gene is ytfE [C]

Identifier: 146300169

GI number: 146300169

Start: 2888735

End: 2889466

Strand: Direct

Name: ytfE [C]

Synonym: Fjoh_2414

Alternate gene names: 146300169

Gene position: 2888735-2889466 (Clockwise)

Preceding gene: 146300168

Following gene: 146300170

Centisome position: 47.38

GC content: 34.97

Gene sequence:

>732_bases
ATGGAAAATTTAAAAAACAAAACAATAGGATCATTCGTAGCTCAGGATTATAGAACTGCTGCGGTTTTCTCTAAATACAG
AATTGATTTTTGCTGCAAAGGAAACAGAACCGTAGACGAAGTCTGCGAAAAACAAAATATTGACGCCGATGTTTTATTGC
AAAACATTCACGAAGTTATTCAGTCTGAAAACAACGGTTCGATTGATTTTAACTCATGGCCGTTGGATTTGCTGGCAGAT
TATATCGAAAAAACACATCATCGTTATGTTGAAGATAAGACACATACACTGCTTGCTTTTTTAGATAAGTTATGCAAAGT
TCACGGAGCCAATTATCCTGAGTTATTTAAGATAAACGAATTGTTTATTGGCTGTGCCGGCGAATTATCACAGCACATGA
AAAAAGAGGAATTAATTTTATTTCCTTTTGTGAAAAGAATGACAAAAACCAAAGAATCTGACGGGATTTTATCTCAGCCT
TCGTTTGGTTCAGTTTCAAATCCAATCGCGATGATGATGCACGAACACGATAATGAGGGAGAGCGTTTTAGAGAAATTGC
TGCTTTAACAGATCATTACACGCCGCCTGCAGATGCTTGTACAACGTATAAAGTAACTTTTGCAATGCTTAAGGAATTTG
AAGAAGATTTGCATAAGCACATTCATTTAGAAAATAATATCCTGTTTCCAAAAGCAGTTCTTTTAGAAAAAGATTTTGTT
GAAGTAGAATAA

Upstream 100 bases:

>100_bases
GAGATTCTATTTTCGGAATCGGATTTATAACAATGGCATGGTTTGTATTTGACCTGACCTTAAAAAACAAAAAATAAAAA
CAAATTTAAAATTGAGTATC

Downstream 100 bases:

>100_bases
AAATAAATTTTAATAGTTCGAAAAGCACCGATAGCACATTTTAAAATGATATTTATCGGTGTTTTTTATTTGAAGAAATG
TTATTTTTAACTCATTGAGT

Product: hemerythrin HHE cation binding domain-containing protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MENLKNKTIGSFVAQDYRTAAVFSKYRIDFCCKGNRTVDEVCEKQNIDADVLLQNIHEVIQSENNGSIDFNSWPLDLLAD
YIEKTHHRYVEDKTHTLLAFLDKLCKVHGANYPELFKINELFIGCAGELSQHMKKEELILFPFVKRMTKTKESDGILSQP
SFGSVSNPIAMMMHEHDNEGERFREIAALTDHYTPPADACTTYKVTFAMLKEFEEDLHKHIHLENNILFPKAVLLEKDFV
EVE

Sequences:

>Translated_243_residues
MENLKNKTIGSFVAQDYRTAAVFSKYRIDFCCKGNRTVDEVCEKQNIDADVLLQNIHEVIQSENNGSIDFNSWPLDLLAD
YIEKTHHRYVEDKTHTLLAFLDKLCKVHGANYPELFKINELFIGCAGELSQHMKKEELILFPFVKRMTKTKESDGILSQP
SFGSVSNPIAMMMHEHDNEGERFREIAALTDHYTPPADACTTYKVTFAMLKEFEEDLHKHIHLENNILFPKAVLLEKDFV
EVE
>Mature_243_residues
MENLKNKTIGSFVAQDYRTAAVFSKYRIDFCCKGNRTVDEVCEKQNIDADVLLQNIHEVIQSENNGSIDFNSWPLDLLAD
YIEKTHHRYVEDKTHTLLAFLDKLCKVHGANYPELFKINELFIGCAGELSQHMKKEELILFPFVKRMTKTKESDGILSQP
SFGSVSNPIAMMMHEHDNEGERFREIAALTDHYTPPADACTTYKVTFAMLKEFEEDLHKHIHLENNILFPKAVLLEKDFV
EVE

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=230, Percent_Identity=32.6086956521739, Blast_Score=123, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 28017; Mature: 28017

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLKNKTIGSFVAQDYRTAAVFSKYRIDFCCKGNRTVDEVCEKQNIDADVLLQNIHEVI
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHH
QSENNGSIDFNSWPLDLLADYIEKTHHRYVEDKTHTLLAFLDKLCKVHGANYPELFKINE
HCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHH
LFIGCAGELSQHMKKEELILFPFVKRMTKTKESDGILSQPSFGSVSNPIAMMMHEHDNEG
HHHCCHHHHHHHHHHHCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH
ERFREIAALTDHYTPPADACTTYKVTFAMLKEFEEDLHKHIHLENNILFPKAVLLEKDFV
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHH
EVE
CCC
>Mature Secondary Structure
MENLKNKTIGSFVAQDYRTAAVFSKYRIDFCCKGNRTVDEVCEKQNIDADVLLQNIHEVI
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHH
QSENNGSIDFNSWPLDLLADYIEKTHHRYVEDKTHTLLAFLDKLCKVHGANYPELFKINE
HCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHH
LFIGCAGELSQHMKKEELILFPFVKRMTKTKESDGILSQPSFGSVSNPIAMMMHEHDNEG
HHHCCHHHHHHHHHHHCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH
ERFREIAALTDHYTPPADACTTYKVTFAMLKEFEEDLHKHIHLENNILFPKAVLLEKDFV
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHH
EVE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA