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The map label for this gene is pepD [H]

Identifier: 146300155

GI number: 146300155

Start: 2872647

End: 2874107

Strand: Direct

Name: pepD [H]

Synonym: Fjoh_2400

Alternate gene names: 146300155

Gene position: 2872647-2874107 (Clockwise)

Preceding gene: 146300154

Following gene: 146300159

Centisome position: 47.12

GC content: 36.96

Gene sequence:

>1461_bases
ATGAGTCAGGAAATAAGAAATCTGGAACCAAAAGCACTTTGGAACAAATTTGCAGATTTAAACGCTGTTCCGCGTCCTTC
GAAGAAAGAAGAGCGAGTAATCGAGTTTATGAAAAACTTTGGAAACAGCTTGGGTTTAGAAACTTTTGAAGATGAAATCC
GAAATGTAATCATCAGAAAACCGGCAACTCCGGGAATGGAAAACCGTAAACCAATCGTAATGCAGGGACACCTGGATATG
GTGCACCAAAAAAATGCTGATACCGTTTTTGATTTCGATACACAAGGAATTGATATGTATGTTGATGGTGACTGGGTTCG
TGCGCGTGGTACAACTTTAGGAGCCGACAATGGGTTAGGAGTGGCAACTATTATGGCTGTTTTGGAAAGCAAAGATATTC
CGCATCCTGCAATTGAGGCCTTATTTACTGTTGATGAAGAAACAGGAATGACTGGGGCTTTAAATCTAAAAGGTGGGATT
CTGCAAGGACAGATTTTGTTGAATCTTGATACAGAGGAAGATGATGAAATTGATATTGGATGTGCTGGTGGAATCGATGT
AACGGCAACAAGAACTTATAATGAAGAAGAAGTTCCTGAAGCTTCAGTTGGTTATACTATTACGGTAAAAGGCTTAAACG
GAGGACATTCTGGAATGGATATTCATAAAGGTTTAGGAAACGCAAACAAAATTATGAACCGTTTATTATTTGATGGTTTT
GAAAATTTTGGACTGCAGGTTTCTGAAATTAACGGAGGAAGTCTTAGAAATGCAATTCCTAGAGAAAGTGTTGCGAAAGT
AATTATTTCTCAAATGTTTGATGAAGCGTATGTGTATGACATGCAGGAAGTTATTTCTGATATTAAAGCTGAATACAAAA
CAACAGAACCTAACTTAACGATTGAAATCGTAAAATCTGATTTGCCTGAAAAAGTAGTGGATTTAGGCGTTCAGGAAGGT
ATTATAAGAGCGATTTATGCTGCGCAAAACGGAGTTTACAGAATGAGTCCTGATATGACTGATTTAGTTGAAACTTCAAA
TAATATTGCTCGCGTTGTTGTAAAAGACGGAGAAATTTTAGTGGGATGTTTAACACGTTCTTCTGTAGAATCTTCAAAAT
TTGATTTAGCTAATTCGTTACGTTCTGCATTTGAATTAGTAGGATGTGAAGTAGAACTTTCTGGTTCTTATCCGGGATGG
ACTCCAAATGTGAATTCTGAAATATTAGAAGTTTTAAAAGATATTTACGAAAAACAAAATGGCGAACAGCCTAAAGTTGT
AGCTTGTCACGCTGGTTTAGAATGTGGAATTTTAGGGACAAATTATCCAGGAATGGATATGATTTCTTTTGGACCAACAA
TTCACGGAGCGCACTCTCCAGACGAAAGAGCAAGCATTTCATCTGCGCAGAAATATTGGAAATTTGTATTAGAGATTCTT
TCAAATATACCAGTTAAATAG

Upstream 100 bases:

>100_bases
GTCGTTTTAATTTGCGCTAATTCGTGAAATTCGAGGCGGAAAAAGCATTTAAACTTTGTAACTTTGAGGCTCTTAATTGT
TAAACATCAAACAAAATATA

Downstream 100 bases:

>100_bases
TCTCGGTTTACAGTCTCAGTAGTCAGTTACGGTTTTCAGTTTCCTTAGATGCTGAAAACTGTGACTGCGACTGAAAACTT
AATCCCTTTTTGGAGCATTT

Product: aminoacyl-histidine dipeptidase

Products: NA

Alternate protein names: Beta-alanyl-histidine dipeptidase; Carnosinase; Cysteinylglycinase; Peptidase D; Xaa-His dipeptidase; X-His dipeptidase [H]

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MSQEIRNLEPKALWNKFADLNAVPRPSKKEERVIEFMKNFGNSLGLETFEDEIRNVIIRKPATPGMENRKPIVMQGHLDM
VHQKNADTVFDFDTQGIDMYVDGDWVRARGTTLGADNGLGVATIMAVLESKDIPHPAIEALFTVDEETGMTGALNLKGGI
LQGQILLNLDTEEDDEIDIGCAGGIDVTATRTYNEEEVPEASVGYTITVKGLNGGHSGMDIHKGLGNANKIMNRLLFDGF
ENFGLQVSEINGGSLRNAIPRESVAKVIISQMFDEAYVYDMQEVISDIKAEYKTTEPNLTIEIVKSDLPEKVVDLGVQEG
IIRAIYAAQNGVYRMSPDMTDLVETSNNIARVVVKDGEILVGCLTRSSVESSKFDLANSLRSAFELVGCEVELSGSYPGW
TPNVNSEILEVLKDIYEKQNGEQPKVVACHAGLECGILGTNYPGMDMISFGPTIHGAHSPDERASISSAQKYWKFVLEIL
SNIPVK

Sequences:

>Translated_486_residues
MSQEIRNLEPKALWNKFADLNAVPRPSKKEERVIEFMKNFGNSLGLETFEDEIRNVIIRKPATPGMENRKPIVMQGHLDM
VHQKNADTVFDFDTQGIDMYVDGDWVRARGTTLGADNGLGVATIMAVLESKDIPHPAIEALFTVDEETGMTGALNLKGGI
LQGQILLNLDTEEDDEIDIGCAGGIDVTATRTYNEEEVPEASVGYTITVKGLNGGHSGMDIHKGLGNANKIMNRLLFDGF
ENFGLQVSEINGGSLRNAIPRESVAKVIISQMFDEAYVYDMQEVISDIKAEYKTTEPNLTIEIVKSDLPEKVVDLGVQEG
IIRAIYAAQNGVYRMSPDMTDLVETSNNIARVVVKDGEILVGCLTRSSVESSKFDLANSLRSAFELVGCEVELSGSYPGW
TPNVNSEILEVLKDIYEKQNGEQPKVVACHAGLECGILGTNYPGMDMISFGPTIHGAHSPDERASISSAQKYWKFVLEIL
SNIPVK
>Mature_485_residues
SQEIRNLEPKALWNKFADLNAVPRPSKKEERVIEFMKNFGNSLGLETFEDEIRNVIIRKPATPGMENRKPIVMQGHLDMV
HQKNADTVFDFDTQGIDMYVDGDWVRARGTTLGADNGLGVATIMAVLESKDIPHPAIEALFTVDEETGMTGALNLKGGIL
QGQILLNLDTEEDDEIDIGCAGGIDVTATRTYNEEEVPEASVGYTITVKGLNGGHSGMDIHKGLGNANKIMNRLLFDGFE
NFGLQVSEINGGSLRNAIPRESVAKVIISQMFDEAYVYDMQEVISDIKAEYKTTEPNLTIEIVKSDLPEKVVDLGVQEGI
IRAIYAAQNGVYRMSPDMTDLVETSNNIARVVVKDGEILVGCLTRSSVESSKFDLANSLRSAFELVGCEVELSGSYPGWT
PNVNSEILEVLKDIYEKQNGEQPKVVACHAGLECGILGTNYPGMDMISFGPTIHGAHSPDERASISSAQKYWKFVLEILS
NIPVK

Specific function: Dipeptidase with broad substrate specificity. Requires dipeptide substrates with an unblocked N-terminus and the amino group in the alpha or beta position. Non-protein amino acids and proline are not accepted in the C-terminal position, whereas some dipep

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20C family [H]

Homologues:

Organism=Escherichia coli, GI1786432, Length=499, Percent_Identity=42.2845691382766, Blast_Score=413, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002933
- InterPro:   IPR011650
- InterPro:   IPR001160 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.4.13.3 [H]

Molecular weight: Translated: 53296; Mature: 53165

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEIRNLEPKALWNKFADLNAVPRPSKKEERVIEFMKNFGNSLGLETFEDEIRNVIIRK
CCCCHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEC
PATPGMENRKPIVMQGHLDMVHQKNADTVFDFDTQGIDMYVDGDWVRARGTTLGADNGLG
CCCCCCCCCCCEEEECCHHHHHCCCCCEEEEECCCCEEEEECCCEEEECCCCCCCCCCCH
VATIMAVLESKDIPHPAIEALFTVDEETGMTGALNLKGGILQGQILLNLDTEEDDEIDIG
HHHHHHHHHCCCCCCHHHHHHEEECCCCCCEEEEECCCCEEEEEEEEEECCCCCCCEEEE
CAGGIDVTATRTYNEEEVPEASVGYTITVKGLNGGHSGMDIHKGLGNANKIMNRLLFDGF
ECCCCEEEEEECCCHHHCCCCCCCEEEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHCH
ENFGLQVSEINGGSLRNAIPRESVAKVIISQMFDEAYVYDMQEVISDIKAEYKTTEPNLT
HHHCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
IEIVKSDLPEKVVDLGVQEGIIRAIYAAQNGVYRMSPDMTDLVETSNNIARVVVKDGEIL
EEEECCCCHHHHHHCCHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCEEEEEEECCCEE
VGCLTRSSVESSKFDLANSLRSAFELVGCEVELSGSYPGWTPNVNSEILEVLKDIYEKQN
EEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
GEQPKVVACHAGLECGILGTNYPGMDMISFGPTIHGAHSPDERASISSAQKYWKFVLEIL
CCCCCEEEEECCCEEEEEECCCCCCCEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
SNIPVK
HCCCCC
>Mature Secondary Structure 
SQEIRNLEPKALWNKFADLNAVPRPSKKEERVIEFMKNFGNSLGLETFEDEIRNVIIRK
CCCHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEC
PATPGMENRKPIVMQGHLDMVHQKNADTVFDFDTQGIDMYVDGDWVRARGTTLGADNGLG
CCCCCCCCCCCEEEECCHHHHHCCCCCEEEEECCCCEEEEECCCEEEECCCCCCCCCCCH
VATIMAVLESKDIPHPAIEALFTVDEETGMTGALNLKGGILQGQILLNLDTEEDDEIDIG
HHHHHHHHHCCCCCCHHHHHHEEECCCCCCEEEEECCCCEEEEEEEEEECCCCCCCEEEE
CAGGIDVTATRTYNEEEVPEASVGYTITVKGLNGGHSGMDIHKGLGNANKIMNRLLFDGF
ECCCCEEEEEECCCHHHCCCCCCCEEEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHCH
ENFGLQVSEINGGSLRNAIPRESVAKVIISQMFDEAYVYDMQEVISDIKAEYKTTEPNLT
HHHCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
IEIVKSDLPEKVVDLGVQEGIIRAIYAAQNGVYRMSPDMTDLVETSNNIARVVVKDGEIL
EEEECCCCHHHHHHCCHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCEEEEEEECCCEE
VGCLTRSSVESSKFDLANSLRSAFELVGCEVELSGSYPGWTPNVNSEILEVLKDIYEKQN
EEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
GEQPKVVACHAGLECGILGTNYPGMDMISFGPTIHGAHSPDERASISSAQKYWKFVLEIL
CCCCCEEEEECCCEEEEEECCCCCCCEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
SNIPVK
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1695895; 9278503; 2651887 [H]