| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300113
Identifier: 146300113
GI number: 146300113
Start: 2828173
End: 2830509
Strand: Direct
Name: 146300113
Synonym: Fjoh_2358
Alternate gene names: NA
Gene position: 2828173-2830509 (Clockwise)
Preceding gene: 146300110
Following gene: 146300114
Centisome position: 46.39
GC content: 34.57
Gene sequence:
>2337_bases ATGAATATTCTGCTGCAATCTAATTTTCGTTTTATAATTGGAGTTTTACTATTTTCTTTTACAGTAAACTGTAATGCGCA AAAAAAGACAGACAATAAAAATTTAATTCAATATGTTGATCCAATGATTGGAACGGCAAAAATGGGACATACTTATCCTG GTGCAACAGTTCCGTTTGGCAGTGTGCAGTTAAGTCCGGAAACCGATACAATTGCGTATAGTTTAAACGGAAAATACAAT GGAGAAGTTTATAAATACTGTGCGGGATATCAATATGAAGATAAAACCATTGTAGGATTCAGCCACACACATTTTAGCGG AACAGGCCATTCAGATTTAGGAGATTTTCTAATTATGCCAACCACAGGAAAACTGCAATTGAATCCAGGCGTGGCATCAA AACCATTGTCAGGATATCGATCAGCATTTTCTCATTCAACAGAAAAAGCAGAGCCGGCTTATTACAGCGTTCTTCTGGAA GATCACAATATTAAAGCAGAACTTACTGCAACAACCAGAGTTGGAATGCATCAATACACATTTCCAAAATCAGATGATGC CCATATTATTCTCGATTTAACTTCTGGAATTTATAATTACGATAAAAAGAATGTTTGGACTTTTGTGCGTGTAGAAAACG ATACTCTGATTACAGGTTATCGCCAAACAAACGGCTGGGCAAGAACCAGAACGGTTTATTTTGCCATGTCTTTTAGCAAA CCAATAAAAAGCTACGGACAGGCTGTGCAGGAAAAAAGCGTTTACAGAGGTTTTTGGGGAAGATTTGATCAAACAAAAAA TTTCCCTGAAATGGCAGGACAAAACCTGAAATTGTTTTTTGATTTTGATACCAATGAAGGAGAAAAAATTAAAATTAAAA TGGCTTTATCGCCTGTAAGTTCTGCAGGAGCCTTAGAAAACATGAAAAAAGAAACTCCAAACTGGGATTTTGAACAAGTT AAAAAACAAAGTCAGGAAGTATGGAACAAAGAATTGAATAAAATTCAGGTTGAAACCATTCAAAAAGAAGATTTGGTAAA CTTTTATACCGCAATGTATCATGCTTTTCTTGGCCCGACAGAATACATGGATTTAGACCGAAATTATAAAGGTTTGGATA TGAATGTTCATAAAGCTGAAATCTTTACCAATTATACCAGTTATTCACTTTGGGATACTTATAGAGCATTACATCCATTC TTTAATATTGTACAGCCTAAAAGAAATGCCGATATGGTAAGTTCAATGCTGGCACATTCTGATCAAAGTGTGCATAAAAT GCTGCCAATTTGGTCACATTATGCTAACGAAAACTGGTGTATGATTGGGTATCATTCCGTTTCGGTTGTGGCAGATGCCA TTGTAAAAGGTAATGTTAGTTTTGATGCCGAAAAAGCGCTTCAGGCTTGTGTTAATACAGCAAAAGTACCTTATTATGAC GGATTAGAATATTATATGAAAAAAGGATATGTTCCTGAAGATAAAAATGGTTCATCTGTTTCTAAAACCTTAGAATATGC TTATGACGACTGGGCAATTGCACAGGCAGCAAAGAAACTGGGTAAAACAGACGTTTATAATGAATTTATCGAAAGATCTA AAAATTATAAAAACGTTTACGATGAGAAAACCGGATTTATGCGTCCTAAATTAAACGACGGAACTTTTAAAAAAGAATTT GATCCGCTTGATACACACGGACAGGGATTTATTGAAGGAAATTCATGGAATTACAGTTTGTATGTACCGCAGGATCCCGC AGATATGATTAAAATGATGGGAGGAAATGAGAAATTTAAAATTCGTCTAGATTCACTTTTCAATATGCATTTACCAGATA AGTATTTCGAAAATACAGAAGATATTACAAGAGAAGGAATTATTGGAAATTATGTTCATGGAAACGAACCTTCGCATCAT GTTGTTTATTTATACAACTGGACAGATTCGGCTTGGAAATCGCAAGACAAAATTAGAATGATCCTGAAAAAAATGTACAG AAATGGGGCAGATGGTTTAGGAGGAAATGACGATTTCGGACAAATGAGTGCCTGGTATATTTTCAGCAGTTTAGGATTTT ATCCTGTTGCTCCGGGTTCTGATGAATATGCTTTAGGAAGTCCGCTTGTTAAAAAAGGTATTTTTAATTTAGAAAACGGA AAAATATTTGAAGTTGAAACCGTAAACCAGTCCAATAAAAATGTGTTCGTAAGTAAAGTTTTGCTGAATGGAAAACAGCT TGATAAACCATTTTTAAAACATGCTGATGTTATAAATGGCGGGAAAATTACGTTTTATATGAGTTCAAAACCCAATAAGA AACAATATCAAAATTAG
Upstream 100 bases:
>100_bases AATACTTACTTTTAGTTTATCAAGTAGTTTAAAATTTAAATTTTTAAAAAGGCTAATTTTATTGTAATTTTCTAGACTTA AAAAAACTTAATAAAACCAC
Downstream 100 bases:
>100_bases TTTTATATTTGTCACCCTGAGCGTAGTCGAAGGGTTTTTGCAACGAAAAAGGGCTTCGACTTCGCTCAGCCTGACAGAAA GATTTTTCAGCCGGACAAGA
Product: putative alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Secreted Protein; Sugar Hydrolase; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein
Number of amino acids: Translated: 778; Mature: 778
Protein sequence:
>778_residues MNILLQSNFRFIIGVLLFSFTVNCNAQKKTDNKNLIQYVDPMIGTAKMGHTYPGATVPFGSVQLSPETDTIAYSLNGKYN GEVYKYCAGYQYEDKTIVGFSHTHFSGTGHSDLGDFLIMPTTGKLQLNPGVASKPLSGYRSAFSHSTEKAEPAYYSVLLE DHNIKAELTATTRVGMHQYTFPKSDDAHIILDLTSGIYNYDKKNVWTFVRVENDTLITGYRQTNGWARTRTVYFAMSFSK PIKSYGQAVQEKSVYRGFWGRFDQTKNFPEMAGQNLKLFFDFDTNEGEKIKIKMALSPVSSAGALENMKKETPNWDFEQV KKQSQEVWNKELNKIQVETIQKEDLVNFYTAMYHAFLGPTEYMDLDRNYKGLDMNVHKAEIFTNYTSYSLWDTYRALHPF FNIVQPKRNADMVSSMLAHSDQSVHKMLPIWSHYANENWCMIGYHSVSVVADAIVKGNVSFDAEKALQACVNTAKVPYYD GLEYYMKKGYVPEDKNGSSVSKTLEYAYDDWAIAQAAKKLGKTDVYNEFIERSKNYKNVYDEKTGFMRPKLNDGTFKKEF DPLDTHGQGFIEGNSWNYSLYVPQDPADMIKMMGGNEKFKIRLDSLFNMHLPDKYFENTEDITREGIIGNYVHGNEPSHH VVYLYNWTDSAWKSQDKIRMILKKMYRNGADGLGGNDDFGQMSAWYIFSSLGFYPVAPGSDEYALGSPLVKKGIFNLENG KIFEVETVNQSNKNVFVSKVLLNGKQLDKPFLKHADVINGGKITFYMSSKPNKKQYQN
Sequences:
>Translated_778_residues MNILLQSNFRFIIGVLLFSFTVNCNAQKKTDNKNLIQYVDPMIGTAKMGHTYPGATVPFGSVQLSPETDTIAYSLNGKYN GEVYKYCAGYQYEDKTIVGFSHTHFSGTGHSDLGDFLIMPTTGKLQLNPGVASKPLSGYRSAFSHSTEKAEPAYYSVLLE DHNIKAELTATTRVGMHQYTFPKSDDAHIILDLTSGIYNYDKKNVWTFVRVENDTLITGYRQTNGWARTRTVYFAMSFSK PIKSYGQAVQEKSVYRGFWGRFDQTKNFPEMAGQNLKLFFDFDTNEGEKIKIKMALSPVSSAGALENMKKETPNWDFEQV KKQSQEVWNKELNKIQVETIQKEDLVNFYTAMYHAFLGPTEYMDLDRNYKGLDMNVHKAEIFTNYTSYSLWDTYRALHPF FNIVQPKRNADMVSSMLAHSDQSVHKMLPIWSHYANENWCMIGYHSVSVVADAIVKGNVSFDAEKALQACVNTAKVPYYD GLEYYMKKGYVPEDKNGSSVSKTLEYAYDDWAIAQAAKKLGKTDVYNEFIERSKNYKNVYDEKTGFMRPKLNDGTFKKEF DPLDTHGQGFIEGNSWNYSLYVPQDPADMIKMMGGNEKFKIRLDSLFNMHLPDKYFENTEDITREGIIGNYVHGNEPSHH VVYLYNWTDSAWKSQDKIRMILKKMYRNGADGLGGNDDFGQMSAWYIFSSLGFYPVAPGSDEYALGSPLVKKGIFNLENG KIFEVETVNQSNKNVFVSKVLLNGKQLDKPFLKHADVINGGKITFYMSSKPNKKQYQN >Mature_778_residues MNILLQSNFRFIIGVLLFSFTVNCNAQKKTDNKNLIQYVDPMIGTAKMGHTYPGATVPFGSVQLSPETDTIAYSLNGKYN GEVYKYCAGYQYEDKTIVGFSHTHFSGTGHSDLGDFLIMPTTGKLQLNPGVASKPLSGYRSAFSHSTEKAEPAYYSVLLE DHNIKAELTATTRVGMHQYTFPKSDDAHIILDLTSGIYNYDKKNVWTFVRVENDTLITGYRQTNGWARTRTVYFAMSFSK PIKSYGQAVQEKSVYRGFWGRFDQTKNFPEMAGQNLKLFFDFDTNEGEKIKIKMALSPVSSAGALENMKKETPNWDFEQV KKQSQEVWNKELNKIQVETIQKEDLVNFYTAMYHAFLGPTEYMDLDRNYKGLDMNVHKAEIFTNYTSYSLWDTYRALHPF FNIVQPKRNADMVSSMLAHSDQSVHKMLPIWSHYANENWCMIGYHSVSVVADAIVKGNVSFDAEKALQACVNTAKVPYYD GLEYYMKKGYVPEDKNGSSVSKTLEYAYDDWAIAQAAKKLGKTDVYNEFIERSKNYKNVYDEKTGFMRPKLNDGTFKKEF DPLDTHGQGFIEGNSWNYSLYVPQDPADMIKMMGGNEKFKIRLDSLFNMHLPDKYFENTEDITREGIIGNYVHGNEPSHH VVYLYNWTDSAWKSQDKIRMILKKMYRNGADGLGGNDDFGQMSAWYIFSSLGFYPVAPGSDEYALGSPLVKKGIFNLENG KIFEVETVNQSNKNVFVSKVLLNGKQLDKPFLKHADVINGGKITFYMSSKPNKKQYQN
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88783; Mature: 88783
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILLQSNFRFIIGVLLFSFTVNCNAQKKTDNKNLIQYVDPMIGTAKMGHTYPGATVPFG CEEEEECCHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCC SVQLSPETDTIAYSLNGKYNGEVYKYCAGYQYEDKTIVGFSHTHFSGTGHSDLGDFLIMP CEEECCCCCEEEEEECCCCCCCEEEEECCCEECCCEEEEEEECCCCCCCCCCCCCEEEEC TTGKLQLNPGVASKPLSGYRSAFSHSTEKAEPAYYSVLLEDHNIKAELTATTRVGMHQYT CCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEEC FPKSDDAHIILDLTSGIYNYDKKNVWTFVRVENDTLITGYRQTNGWARTRTVYFAMSFSK CCCCCCCEEEEEECCCHHCCCCCCEEEEEEEECCEEEEEEEECCCCEEEEEEEEEEECCH PIKSYGQAVQEKSVYRGFWGRFDQTKNFPEMAGQNLKLFFDFDTNEGEKIKIKMALSPVS HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEECCCCCCEEEEEEEECCCC SAGALENMKKETPNWDFEQVKKQSQEVWNKELNKIQVETIQKEDLVNFYTAMYHAFLGPT CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCEEEEEHHCHHHHHHHHHHHHHHHCCCH EYMDLDRNYKGLDMNVHKAEIFTNYTSYSLWDTYRALHPFFNIVQPKRNADMVSSMLAHS HHEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC DQSVHKMLPIWSHYANENWCMIGYHSVSVVADAIVKGNVSFDAEKALQACVNTAKVPYYD CHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC GLEYYMKKGYVPEDKNGSSVSKTLEYAYDDWAIAQAAKKLGKTDVYNEFIERSKNYKNVY CHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHH DEKTGFMRPKLNDGTFKKEFDPLDTHGQGFIEGNSWNYSLYVPQDPADMIKMMGGNEKFK HCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCHHHHHHHHCCCCEEE IRLDSLFNMHLPDKYFENTEDITREGIIGNYVHGNEPSHHVVYLYNWTDSAWKSQDKIRM EEEEHHHCCCCCHHHHCCCHHHHHCCCEECCCCCCCCCCEEEEEEECCCHHHCCHHHHHH ILKKMYRNGADGLGGNDDFGQMSAWYIFSSLGFYPVAPGSDEYALGSPLVKKGIFNLENG HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHCCEECCCC KIFEVETVNQSNKNVFVSKVLLNGKQLDKPFLKHADVINGGKITFYMSSKPNKKQYQN CEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHCCEECCCEEEEEECCCCCHHHCCC >Mature Secondary Structure MNILLQSNFRFIIGVLLFSFTVNCNAQKKTDNKNLIQYVDPMIGTAKMGHTYPGATVPFG CEEEEECCHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCC SVQLSPETDTIAYSLNGKYNGEVYKYCAGYQYEDKTIVGFSHTHFSGTGHSDLGDFLIMP CEEECCCCCEEEEEECCCCCCCEEEEECCCEECCCEEEEEEECCCCCCCCCCCCCEEEEC TTGKLQLNPGVASKPLSGYRSAFSHSTEKAEPAYYSVLLEDHNIKAELTATTRVGMHQYT CCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEEC FPKSDDAHIILDLTSGIYNYDKKNVWTFVRVENDTLITGYRQTNGWARTRTVYFAMSFSK CCCCCCCEEEEEECCCHHCCCCCCEEEEEEEECCEEEEEEEECCCCEEEEEEEEEEECCH PIKSYGQAVQEKSVYRGFWGRFDQTKNFPEMAGQNLKLFFDFDTNEGEKIKIKMALSPVS HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEECCCCCCEEEEEEEECCCC SAGALENMKKETPNWDFEQVKKQSQEVWNKELNKIQVETIQKEDLVNFYTAMYHAFLGPT CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCEEEEEHHCHHHHHHHHHHHHHHHCCCH EYMDLDRNYKGLDMNVHKAEIFTNYTSYSLWDTYRALHPFFNIVQPKRNADMVSSMLAHS HHEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC DQSVHKMLPIWSHYANENWCMIGYHSVSVVADAIVKGNVSFDAEKALQACVNTAKVPYYD CHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC GLEYYMKKGYVPEDKNGSSVSKTLEYAYDDWAIAQAAKKLGKTDVYNEFIERSKNYKNVY CHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHH DEKTGFMRPKLNDGTFKKEFDPLDTHGQGFIEGNSWNYSLYVPQDPADMIKMMGGNEKFK HCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCHHHHHHHHCCCCEEE IRLDSLFNMHLPDKYFENTEDITREGIIGNYVHGNEPSHHVVYLYNWTDSAWKSQDKIRM EEEEHHHCCCCCHHHHCCCHHHHHCCCEECCCCCCCCCCEEEEEEECCCHHHCCHHHHHH ILKKMYRNGADGLGGNDDFGQMSAWYIFSSLGFYPVAPGSDEYALGSPLVKKGIFNLENG HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHCCEECCCC KIFEVETVNQSNKNVFVSKVLLNGKQLDKPFLKHADVINGGKITFYMSSKPNKKQYQN CEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHCCEECCCEEEEEECCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA