| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300051
Identifier: 146300051
GI number: 146300051
Start: 2770024
End: 2770554
Strand: Reverse
Name: 146300051
Synonym: Fjoh_2296
Alternate gene names: NA
Gene position: 2770554-2770024 (Counterclockwise)
Preceding gene: 146300054
Following gene: 146300050
Centisome position: 45.44
GC content: 25.42
Gene sequence:
>531_bases ATGATCGAAAATAACATTAAGGAAAAAATAGAAAATCTAACAATAAGATTACTTGAAATTGTACATCTTCATTGTTGGAA TAATATTTCAAAAAATTTAATGTTCATTCTTTCAGACATTTCAGAAGTAAAAGGAGAAAACTTTTTTATTAAACGAAGAA ATAAGAACAAGCTGAATAAAAAGAAAAATCCTAAAAACCTCAATGAAGTAATCGAAGATCTTCAAGAAATTTACGATTTG ATTTATGACATCAATCTATATGTCTATAAATCTGAAAAACATAAAACCATCATTGAAATTCAATACTTTCTTAAGAGCAA ACTTGATACTGATTATTTAAAAACAGCAGCTAACAATCCTCCAATGTTACATTGCAAAATTGCTCAACCTCCTTATAAAA ATGATCAAGAAAAGTTTGATGTTAATTGGGAATTAGGTGGAATAAGATATTATTTAAATATCCTTTGGTGGAAAATAAAC TATAATATGCATAAACGTCTCATACTTTTACATAATCTACATAAGAGTTAA
Upstream 100 bases:
>100_bases GTTGTATGCAGCCGGCATTAAATCAGACTTAAAAACTTACAAGAAATACCTTATATTTGTTTTAATTAAAGAACCCTTTT AAAATAACATTTAGATTTAT
Downstream 100 bases:
>100_bases ACATGGAAAACTTCGACTGGACATCATTTACCAAAAAAATACCCGTTAAAGCTAAACTCAGTAACATTTATAATGCCTGG ACAATTGCAGGTGAATTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MIENNIKEKIENLTIRLLEIVHLHCWNNISKNLMFILSDISEVKGENFFIKRRNKNKLNKKKNPKNLNEVIEDLQEIYDL IYDINLYVYKSEKHKTIIEIQYFLKSKLDTDYLKTAANNPPMLHCKIAQPPYKNDQEKFDVNWELGGIRYYLNILWWKIN YNMHKRLILLHNLHKS
Sequences:
>Translated_176_residues MIENNIKEKIENLTIRLLEIVHLHCWNNISKNLMFILSDISEVKGENFFIKRRNKNKLNKKKNPKNLNEVIEDLQEIYDL IYDINLYVYKSEKHKTIIEIQYFLKSKLDTDYLKTAANNPPMLHCKIAQPPYKNDQEKFDVNWELGGIRYYLNILWWKIN YNMHKRLILLHNLHKS >Mature_176_residues MIENNIKEKIENLTIRLLEIVHLHCWNNISKNLMFILSDISEVKGENFFIKRRNKNKLNKKKNPKNLNEVIEDLQEIYDL IYDINLYVYKSEKHKTIIEIQYFLKSKLDTDYLKTAANNPPMLHCKIAQPPYKNDQEKFDVNWELGGIRYYLNILWWKIN YNMHKRLILLHNLHKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21331; Mature: 21331
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIENNIKEKIENLTIRLLEIVHLHCWNNISKNLMFILSDISEVKGENFFIKRRNKNKLNK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC KKNPKNLNEVIEDLQEIYDLIYDINLYVYKSEKHKTIIEIQYFLKSKLDTDYLKTAANNP CCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEHHHHHHHCCCHHHHHHCCCCC PMLHCKIAQPPYKNDQEKFDVNWELGGIRYYLNILWWKINYNMHKRLILLHNLHKS CEEEEEECCCCCCCCCCEEEEEEEECHHEEEEEEEEEEEECCCHHHHHEECCCCCC >Mature Secondary Structure MIENNIKEKIENLTIRLLEIVHLHCWNNISKNLMFILSDISEVKGENFFIKRRNKNKLNK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC KKNPKNLNEVIEDLQEIYDLIYDINLYVYKSEKHKTIIEIQYFLKSKLDTDYLKTAANNP CCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEHHHHHHHCCCHHHHHHCCCCC PMLHCKIAQPPYKNDQEKFDVNWELGGIRYYLNILWWKINYNMHKRLILLHNLHKS CEEEEEECCCCCCCCCCEEEEEEEECHHEEEEEEEEEEEECCCHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA