| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is steT [H]
Identifier: 146300034
GI number: 146300034
Start: 2749059
End: 2750207
Strand: Reverse
Name: steT [H]
Synonym: Fjoh_2279
Alternate gene names: 146300034
Gene position: 2750207-2749059 (Counterclockwise)
Preceding gene: 146300035
Following gene: 146300032
Centisome position: 45.11
GC content: 34.2
Gene sequence:
>1149_bases TTGCCTGAAAATATCATCCTAAAAAACAAATTCAAGAAATGTCAGATTCTCCAAAAAATCAATGGCGGATCTTATAATTA TATTAAAAGAGCTTTGGGTGATTATGCCGGATTTCTTTCAGGATGGTACGATTATATTGTAAATGCCATCCCTCCTGCTT TTTACTGTATTGTAATCAGCGAATACACCATTATTTTATTTCCGCAATTAGCACATTATTCTACCGTATTATCTATTTCT TTATTGGTTGCATTTGTATTATTGCATTTAAGCGGCGTAAAAAACGGAAGCGTCATTCAGCAGATTACCAGTTTCTTAAA AGTAATTTGCTTTGTAGCTTTGGTTACGGCTTGTTTTATGTATTCTGGAGTTGAAGTTCCGCCAATCAAAACAGATAATT CAATTTTTCAAATCGGACTTATTTTCGGATTCTTCAAATCTTTACAGCTTATTATTGGGACTTACAACGGCTGGAACGGT GTTTGTTTTTTTGCTGAAGAAAATGAAAATCCAAGCAAAAATATTCCGAAATCTTTGTACAGCGGCGTTCTGCTTGTTGT AGCCATTTATATTTTGGTAAATGCAGCTTTTTTTCACGTTCTCCCAATCGAAACTATAGCAAAATCGAATCTGGCTGCTG CCGATGTTGCAAAAATTCTTTTCGGTGACAGCGGAGCTAAAATCGTTACCATAATTTCTATTTTCTCCTTAATTAGTATT TTGAATGCGTTTATGATGATTCCGCCAAGAATTTTGTACGGATTAAGTCGTGACGGATTTTTTATCGAAAAAGGAACTCA AGTCAATAAAGGCGGAACACCAATTGTTGCGCTTTTGGTTTCATCATTTTTCAGTTTGTTTTTAATCTGCATTGGTTCTT TTGAAGTCTTATTTTCTTTTGCAGCTTTTATCTCGATAATCGTTTGGGGACTGGCCTATTATTCACTTTTAAAACTAAGA ACTACAGAACCGGATCTACCAAGACCCTATCGTTCTTTTTGGTATCCGTGGACAACTATAATAGCGATTATATTTTCTAT CGCATTACTTGCTGGATTCATTTACAGCGACCCTAAAAGCTTTATTATTATTGTTGGAATTGCAATTGTTTCTTATCCTT TGTTTTTGGTTTTGAAGAAACAAAAATAA
Upstream 100 bases:
>100_bases ATTGAATTAGAGTTTTGATTTTATCCCAAGATTTTCAGTTTCACTAGAAAATCTTGGGATTTTTATTTTAAGCTCAATTA TAATTCAATTAACACTATTT
Downstream 100 bases:
>100_bases CATAATTTTGTCATTCCGAGGAACGAGGAATCACACATAAAACTCTGTACAGTGATTCTCCAATCTTTGTCGATTTCCGA GTGTGATTCCTCGTTCCTCG
Product: amino acid permease-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MPENIILKNKFKKCQILQKINGGSYNYIKRALGDYAGFLSGWYDYIVNAIPPAFYCIVISEYTIILFPQLAHYSTVLSIS LLVAFVLLHLSGVKNGSVIQQITSFLKVICFVALVTACFMYSGVEVPPIKTDNSIFQIGLIFGFFKSLQLIIGTYNGWNG VCFFAEENENPSKNIPKSLYSGVLLVVAIYILVNAAFFHVLPIETIAKSNLAAADVAKILFGDSGAKIVTIISIFSLISI LNAFMMIPPRILYGLSRDGFFIEKGTQVNKGGTPIVALLVSSFFSLFLICIGSFEVLFSFAAFISIIVWGLAYYSLLKLR TTEPDLPRPYRSFWYPWTTIIAIIFSIALLAGFIYSDPKSFIIIVGIAIVSYPLFLVLKKQK
Sequences:
>Translated_382_residues MPENIILKNKFKKCQILQKINGGSYNYIKRALGDYAGFLSGWYDYIVNAIPPAFYCIVISEYTIILFPQLAHYSTVLSIS LLVAFVLLHLSGVKNGSVIQQITSFLKVICFVALVTACFMYSGVEVPPIKTDNSIFQIGLIFGFFKSLQLIIGTYNGWNG VCFFAEENENPSKNIPKSLYSGVLLVVAIYILVNAAFFHVLPIETIAKSNLAAADVAKILFGDSGAKIVTIISIFSLISI LNAFMMIPPRILYGLSRDGFFIEKGTQVNKGGTPIVALLVSSFFSLFLICIGSFEVLFSFAAFISIIVWGLAYYSLLKLR TTEPDLPRPYRSFWYPWTTIIAIIFSIALLAGFIYSDPKSFIIIVGIAIVSYPLFLVLKKQK >Mature_381_residues PENIILKNKFKKCQILQKINGGSYNYIKRALGDYAGFLSGWYDYIVNAIPPAFYCIVISEYTIILFPQLAHYSTVLSISL LVAFVLLHLSGVKNGSVIQQITSFLKVICFVALVTACFMYSGVEVPPIKTDNSIFQIGLIFGFFKSLQLIIGTYNGWNGV CFFAEENENPSKNIPKSLYSGVLLVVAIYILVNAAFFHVLPIETIAKSNLAAADVAKILFGDSGAKIVTIISIFSLISIL NAFMMIPPRILYGLSRDGFFIEKGTQVNKGGTPIVALLVSSFFSLFLICIGSFEVLFSFAAFISIIVWGLAYYSLLKLRT TEPDLPRPYRSFWYPWTTIIAIIFSIALLAGFIYSDPKSFIIIVGIAIVSYPLFLVLKKQK
Specific function: Exhibits an obligate exchange activity for serine, threonine and aromatic amino acids [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family [H]
Homologues:
Organism=Homo sapiens, GI186910308, Length=376, Percent_Identity=27.9255319148936, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI186910306, Length=376, Percent_Identity=27.9255319148936, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI186910304, Length=376, Percent_Identity=27.9255319148936, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI115648063, Length=374, Percent_Identity=26.4705882352941, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI115648022, Length=374, Percent_Identity=26.4705882352941, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI7657683, Length=390, Percent_Identity=25.1282051282051, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI187423910, Length=341, Percent_Identity=26.099706744868, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI7657591, Length=341, Percent_Identity=26.099706744868, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI33286428, Length=370, Percent_Identity=25.1351351351351, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI33286430, Length=225, Percent_Identity=25.7777777777778, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI71999149, Length=349, Percent_Identity=25.214899713467, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI87082250, Length=367, Percent_Identity=23.1607629427793, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI2367353, Length=281, Percent_Identity=25.2669039145907, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1786302, Length=368, Percent_Identity=20.6521739130435, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790653, Length=319, Percent_Identity=21.3166144200627, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17540018, Length=331, Percent_Identity=28.0966767371601, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71982608, Length=165, Percent_Identity=30.9090909090909, Blast_Score=78, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71982612, Length=165, Percent_Identity=30.9090909090909, Blast_Score=78, Evalue=8e-15, Organism=Caenorhabditis elegans, GI32566699, Length=378, Percent_Identity=23.015873015873, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI71995388, Length=259, Percent_Identity=25.4826254826255, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71995382, Length=259, Percent_Identity=25.4826254826255, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193208714, Length=169, Percent_Identity=33.1360946745562, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI32566695, Length=169, Percent_Identity=33.1360946745562, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24651635, Length=342, Percent_Identity=25.1461988304094, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI24651633, Length=342, Percent_Identity=25.1461988304094, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI21357367, Length=379, Percent_Identity=26.1213720316623, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24641993, Length=178, Percent_Identity=27.5280898876405, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24641995, Length=178, Percent_Identity=27.5280898876405, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI45550968, Length=383, Percent_Identity=24.8041775456919, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI19921172, Length=383, Percent_Identity=24.8041775456919, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI221331183, Length=325, Percent_Identity=24.3076923076923, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI17647653, Length=325, Percent_Identity=24.3076923076923, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24664379, Length=325, Percent_Identity=24.3076923076923, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 42431; Mature: 42300
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPENIILKNKFKKCQILQKINGGSYNYIKRALGDYAGFLSGWYDYIVNAIPPAFYCIVIS CCCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EYTIILFPQLAHYSTVLSISLLVAFVLLHLSGVKNGSVIQQITSFLKVICFVALVTACFM CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YSGVEVPPIKTDNSIFQIGLIFGFFKSLQLIIGTYNGWNGVCFFAEENENPSKNIPKSLY HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCCHHHH SGVLLVVAIYILVNAAFFHVLPIETIAKSNLAAADVAKILFGDSGAKIVTIISIFSLISI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LNAFMMIPPRILYGLSRDGFFIEKGTQVNKGGTPIVALLVSSFFSLFLICIGSFEVLFSF HHHHHHCCHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFISIIVWGLAYYSLLKLRTTEPDLPRPYRSFWYPWTTIIAIIFSIALLAGFIYSDPKS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC FIIIVGIAIVSYPLFLVLKKQK EEHHHHHHHHHHHHHHEEECCC >Mature Secondary Structure PENIILKNKFKKCQILQKINGGSYNYIKRALGDYAGFLSGWYDYIVNAIPPAFYCIVIS CCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EYTIILFPQLAHYSTVLSISLLVAFVLLHLSGVKNGSVIQQITSFLKVICFVALVTACFM CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YSGVEVPPIKTDNSIFQIGLIFGFFKSLQLIIGTYNGWNGVCFFAEENENPSKNIPKSLY HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCCHHHH SGVLLVVAIYILVNAAFFHVLPIETIAKSNLAAADVAKILFGDSGAKIVTIISIFSLISI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LNAFMMIPPRILYGLSRDGFFIEKGTQVNKGGTPIVALLVSSFFSLFLICIGSFEVLFSF HHHHHHCCHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFISIIVWGLAYYSLLKLRTTEPDLPRPYRSFWYPWTTIIAIIFSIALLAGFIYSDPKS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC FIIIVGIAIVSYPLFLVLKKQK EEHHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]