| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300031
Identifier: 146300031
GI number: 146300031
Start: 2745015
End: 2745500
Strand: Direct
Name: 146300031
Synonym: Fjoh_2276
Alternate gene names: NA
Gene position: 2745015-2745500 (Clockwise)
Preceding gene: 146300030
Following gene: 146300033
Centisome position: 45.02
GC content: 33.13
Gene sequence:
>486_bases ATGAAAAATCTAGTTTTACCATGTCTGCTAGTAATCTGCATTGGATTTCAAAGCTGTAAAAATGACGAAAAACAAAAAGA AGAAGCTGCAGCTAAAGCAGATGCAGAAACAGTTGTGAGCAGTGAGTGTTATCAAGCTGTGTACGAAAAAGATACAATTG CCTTAAAACTGAATACTTTAAAAAACGGAAAACTAAGCGGTAATATGATTATGAAAGTTGCTCCTTCTACAGTTAGAACT GGTGAAGTTGCAGGAGAATTTCATGGTGATACCTTATTTATAGATTACACCTTTAAGGATAATGTAAATAAAGACAAAAC ATTTAAAAACCCAATGGCATTTTTAAAACGAGATAAACAGCTTATTTTAGGAAACGGCACCATGCAGACTACAATGGGAG TTACTTATTTAGTAAAAGATAAACCTATCGATTTTGATCGTGTAAAATATAAATTCGACAGCGCAGAATGTGCCGACAAA AAATAA
Upstream 100 bases:
>100_bases GTCGGGTTTAATTTTGTAATCAATATTTTTTAAAAATCTTTTTCTTGAGTTCTTTTTTATTAATTTTATAGAATAACCAT GAAATAAAAATTGTTCAAAT
Downstream 100 bases:
>100_bases GATATTAAACCTGCCAAGTTTAACTTATAATCATAAAAAAAGCCGTTTCTAATTCAGAAACGGCTTTTACTATTTTTAGA TTTTATTTTTTTATAAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKNLVLPCLLVICIGFQSCKNDEKQKEEAAAKADAETVVSSECYQAVYEKDTIALKLNTLKNGKLSGNMIMKVAPSTVRT GEVAGEFHGDTLFIDYTFKDNVNKDKTFKNPMAFLKRDKQLILGNGTMQTTMGVTYLVKDKPIDFDRVKYKFDSAECADK K
Sequences:
>Translated_161_residues MKNLVLPCLLVICIGFQSCKNDEKQKEEAAAKADAETVVSSECYQAVYEKDTIALKLNTLKNGKLSGNMIMKVAPSTVRT GEVAGEFHGDTLFIDYTFKDNVNKDKTFKNPMAFLKRDKQLILGNGTMQTTMGVTYLVKDKPIDFDRVKYKFDSAECADK K >Mature_161_residues MKNLVLPCLLVICIGFQSCKNDEKQKEEAAAKADAETVVSSECYQAVYEKDTIALKLNTLKNGKLSGNMIMKVAPSTVRT GEVAGEFHGDTLFIDYTFKDNVNKDKTFKNPMAFLKRDKQLILGNGTMQTTMGVTYLVKDKPIDFDRVKYKFDSAECADK K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18009; Mature: 18009
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLVLPCLLVICIGFQSCKNDEKQKEEAAAKADAETVVSSECYQAVYEKDTIALKLNTL CCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECC KNGKLSGNMIMKVAPSTVRTGEVAGEFHGDTLFIDYTFKDNVNKDKTFKNPMAFLKRDKQ CCCCCCCCEEEEECCCCCCCCCCCCEECCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCE LILGNGTMQTTMGVTYLVKDKPIDFDRVKYKFDSAECADKK EEEECCCEEHHCCEEEEEECCCCCHHHEEEEECCCCCCCCC >Mature Secondary Structure MKNLVLPCLLVICIGFQSCKNDEKQKEEAAAKADAETVVSSECYQAVYEKDTIALKLNTL CCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECC KNGKLSGNMIMKVAPSTVRTGEVAGEFHGDTLFIDYTFKDNVNKDKTFKNPMAFLKRDKQ CCCCCCCCEEEEECCCCCCCCCCCCEECCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCE LILGNGTMQTTMGVTYLVKDKPIDFDRVKYKFDSAECADKK EEEECCCEEHHCCEEEEEECCCCCHHHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA