| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yieF [H]
Identifier: 146299943
GI number: 146299943
Start: 2643610
End: 2644149
Strand: Direct
Name: yieF [H]
Synonym: Fjoh_2187
Alternate gene names: 146299943
Gene position: 2643610-2644149 (Clockwise)
Preceding gene: 146299942
Following gene: 146299944
Centisome position: 43.36
GC content: 31.85
Gene sequence:
>540_bases ATGTCTCCACAAACAATAAAAATTATAGCCATAACCGGCAGTACAAGAAAAAACTCAAGTAATTATAAAATTCTAAAACA TATTTCTGAGCAAATTAAAACAGGTTTTGAAGTCGAAATATTTGAAGATTTAGATACCATTCCTCATTTTAATCCAGATT TGGATACCGAAAACCCTCCGAAAGAAGTTGCATCATTAAGAAATAAAATAAAAGAGGCAGACGGAGTAATAATATGCACT CCAGAATACGTGTTCAGTTTACCTGGAAGTTTAAAGAATGCTTTAGAATGGTTTGTTTCGACTACTATTTTTTCAAATAA AAAGACGGGATTAATAACCGCTTCGGCGTCTGGAGAAATGGGACACGAACAACTCCTGCTGATTATGAAAACCCTTGAAG CTAAATTTGATAATAATACACAATTATTAATACAAGGCATTCGAGGTAAAGTAGATGCAGACGGAAAAATTATAAATGAA GAAACCAAAGCAGCCCTTCAAAACTTCACAAATAACTTTGAAAATCAATTTTTATATTAA
Upstream 100 bases:
>100_bases AAAAGAAAACATTTAGAGAAGAATACATCAATTTTCTTGAAAAATTTGAAGTTGATTATGATGAAAAGTTTATTTTTAAA GAACTAATTTAAATTTAAAC
Downstream 100 bases:
>100_bases AATTACTTTCTGAAATTAGATCAAAAATGATTACAAGAAGAACTTTTATTATAAATACTAGTCTGACTGCAGCGACAGTT TTGGCTTTACCTTCATTAGC
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSPQTIKIIAITGSTRKNSSNYKILKHISEQIKTGFEVEIFEDLDTIPHFNPDLDTENPPKEVASLRNKIKEADGVIICT PEYVFSLPGSLKNALEWFVSTTIFSNKKTGLITASASGEMGHEQLLLIMKTLEAKFDNNTQLLIQGIRGKVDADGKIINE ETKAALQNFTNNFENQFLY
Sequences:
>Translated_179_residues MSPQTIKIIAITGSTRKNSSNYKILKHISEQIKTGFEVEIFEDLDTIPHFNPDLDTENPPKEVASLRNKIKEADGVIICT PEYVFSLPGSLKNALEWFVSTTIFSNKKTGLITASASGEMGHEQLLLIMKTLEAKFDNNTQLLIQGIRGKVDADGKIINE ETKAALQNFTNNFENQFLY >Mature_178_residues SPQTIKIIAITGSTRKNSSNYKILKHISEQIKTGFEVEIFEDLDTIPHFNPDLDTENPPKEVASLRNKIKEADGVIICTP EYVFSLPGSLKNALEWFVSTTIFSNKKTGLITASASGEMGHEQLLLIMKTLEAKFDNNTQLLIQGIRGKVDADGKIINEE TKAALQNFTNNFENQFLY
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=165, Percent_Identity=30.9090909090909, Blast_Score=78, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20023; Mature: 19892
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQTIKIIAITGSTRKNSSNYKILKHISEQIKTGFEVEIFEDLDTIPHFNPDLDTENPP CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCCCCH KEVASLRNKIKEADGVIICTPEYVFSLPGSLKNALEWFVSTTIFSNKKTGLITASASGEM HHHHHHHHHHHHHCCEEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC GHEQLLLIMKTLEAKFDNNTQLLIQGIRGKVDADGKIINEETKAALQNFTNNFENQFLY CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SPQTIKIIAITGSTRKNSSNYKILKHISEQIKTGFEVEIFEDLDTIPHFNPDLDTENPP CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCCCCH KEVASLRNKIKEADGVIICTPEYVFSLPGSLKNALEWFVSTTIFSNKKTGLITASASGEM HHHHHHHHHHHHHCCEEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC GHEQLLLIMKTLEAKFDNNTQLLIQGIRGKVDADGKIINEETKAALQNFTNNFENQFLY CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]