| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299856
Identifier: 146299856
GI number: 146299856
Start: 2528772
End: 2531156
Strand: Direct
Name: 146299856
Synonym: Fjoh_2098
Alternate gene names: NA
Gene position: 2528772-2531156 (Clockwise)
Preceding gene: 146299855
Following gene: 146299857
Centisome position: 41.48
GC content: 28.93
Gene sequence:
>2385_bases ATGAAAAACACAATATTAATATTACTGATCATCATACCTTTTTTCTCTTTTTCCCAGGTAAAAATAAACGGAACTATAAA AGATGAAACAGGCTTGTTATCTAATGTAAATGTTATTTTGTCTGATGATAAAGATGTTACTGTAAAAGAAATCGTAACAG GGCAGGACGGTTCTTTTGAATTTGATGTTTCAAAAGGAATTTATAAAATAACAATTAGTTATCTGGACTATGAATCTTTT TTTCAGGAGATTTCTGCAGAAAATGATATACAGCTTGAACCAATTATCTTAAAAAGAAAAGAGAATATTTTAGAAGAAGT GGTAATTAAAAACTCGGGCAGTCTGATAAAAAGAAAGCTGGATAAAACTATTTTTTCTGTTCAGAACAGCCCAATAGCAA GTGTAGGAAACGGGTTTGATGCCTTGAAAAGAGCGCCGGGTTTAATTCTTAAAAATGATGAAATTGTTATGCTGGGAAAA AGCAGTGTTAGAATCATGATAGAAGGAAAAATGGTGCAGCTGACAGGAGAAGAATTAAAAAACTTTTTAAAAACTATTTC TGCAACAGATATTAAAGAAATTGAAGTAATCACTAATCCTTCTTCAAAATATGAAGTAGAAGGAAACAGCGGAATAGTGA ATATCATTTTTAAAAGATCTAAAAAAGATTCTTGGAGTGATAATATCTCTGCAACACATATTCAGGCTAAATATGGTAAA CAGTCGCTTAATAATAATTTCAGCTACAGAAAAGATAAAATCAACTTGTCTTTTATTACAGGATATGATTATGGAGATAC TTTTATAGACCAGCGTATGGAGATTTATTTTAAAGATTCACCTCTTAAATTAAAAACCCATCAAAAGCAAAATGAAAACA GCTTTTCGACAAGACTTTTATTTGATTATAATATGAGCAGTTATGATAAAGTTGGAATTCAATATTCTGGAGCATTTATA AAATCGAACCTGAAAGACAACATTCATACAGACATTTACAACAGCTCTAATGAAATTGATTACTACTTAAAAGCAAACGG AAATTTAGACGGAAAAAAAGACAACCATTCAGTTAATTTATTTTATGAAAGAAAACTGGATACACTAGGTAAAAAAATCA TTTTTAATGTCGATTACCTTAATTACAACCGCGATGTACATAGTAATTTATTGTCCAATAAATACAACACAGATAATGAA TTCATGAATGTTGACTTTGCAAACAATTCAAATGTTAATCAAAACATAGACAATTACAATGCAAAAATAGATGTAGAACA TCCTTCAGCATTTGCTAATTTTCAATACGGTGCCAAAATAAGTTTTATAAAAACAAACAACGATAATATTTACTACGATC TTATTTCAGGAAGCCCGGTTTTAGATCCTGAACTTTCAGATGAGTTTAATTATAAAGAAAATATTCAGGCGGCCTATTTT ACCGGAACCAAAAAAATTAACCAAAAAATAGACCTTCAAATTGGGTTAAGAGGAGAATACACGCAAACAACAGGAGAATC TGAAAAATTAGATCAGATTAATAAAAACGATTATTTTAAGCTTTTCCCAACCGTATTCTTTTCATATCAAAAAAATGAAG ACAATGTTTTTAGTTTTAATTACGGACGAAGAATCCAGAGACCTAGTTATTCTTTACTAAATCCGTTGCGTTATTTTGTA AACAGCAATGTTTCATCACAGGGAAATCCAAATTTACAGCCAGCTTTTATAGATAGTTTTGAATTTTCGCATACATACAA AGAAAACCTAAACACGAAGATTTCTTTTATGTCAAAAACAAATGCTTTTGGAGTTGTGTTTAAATTAGATGAGAGTACTC AGGAACAAATAGTTACTCAGGAAAATTTTTATACAAATTATGGCTTTGCATTGACCGAAAATTATCAGCTGCCAATTTTT TCCTGGTGGAAAACAGATAACACTTTGTTCTTAAATTATTCTGTTTCTAATAAAACAAATAATGATGTAAATGCATCTTT AAAAAATGGTCTTGAATTTTATGGTTCAATTAATAACATTTTTACGTTTGATAAAGATGGAAAAATCATAGGAGAACTTA ATTTTTGGTACAATTCGCCTTATAAAGATAATTTATTCGAGTATTCACAGGCATCATCTCTGGATCTTGCATTTACTTAT AAATCTATAATAAAAAACCTGAATCTTTCTATGGGATTGTTTGACATTTTTAACTCCAGTGTTAGAAAAATGTCTTCAGA GATTAACGGTATAAATCAAAATTACATTTCCTATCCAAGCAATAGATATTTTAGAATTTCTTTAAACTATATGTTTGGAA ATGATAAGATTAAATCTCAAAAAAGAAATTTTGGAAATGAAGAAGAAAGAAAAAGAAGTAATTAA
Upstream 100 bases:
>100_bases ATGCTTATGGAGTAATAATATTAATGTAAGAGCCAAAACAACAAAGCCAAAAGTTCTCTGTACAAGTAAATAGAGAGAAA CTTAATTAAATAAAAAAGAA
Downstream 100 bases:
>100_bases TCAGTATGTATCATGAAAAACCAGTTATTTTTTTTGCATTTCGCAGGAGGCAGTTCATTTTCGTTTGATTTTCTTAAAAA CAAACTTAATAATAGTATTA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor Plug; Nb-Dependent Receptor; NB-Dependent Receptor Exported Protein; NB Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein; NB Dependent/Ligand-Gated Channel; NB-Dependent Receptor Plug Domain-Containing Protein; Outer Membrane Receptor Family Transporter; Nb-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Ferrienterochelin And Colicin; Outer Membrane Receptor Protein Mostly Fe Transport; Protein Containing nB-Dependent Receptor Plug Domain
Number of amino acids: Translated: 794; Mature: 794
Protein sequence:
>794_residues MKNTILILLIIIPFFSFSQVKINGTIKDETGLLSNVNVILSDDKDVTVKEIVTGQDGSFEFDVSKGIYKITISYLDYESF FQEISAENDIQLEPIILKRKENILEEVVIKNSGSLIKRKLDKTIFSVQNSPIASVGNGFDALKRAPGLILKNDEIVMLGK SSVRIMIEGKMVQLTGEELKNFLKTISATDIKEIEVITNPSSKYEVEGNSGIVNIIFKRSKKDSWSDNISATHIQAKYGK QSLNNNFSYRKDKINLSFITGYDYGDTFIDQRMEIYFKDSPLKLKTHQKQNENSFSTRLLFDYNMSSYDKVGIQYSGAFI KSNLKDNIHTDIYNSSNEIDYYLKANGNLDGKKDNHSVNLFYERKLDTLGKKIIFNVDYLNYNRDVHSNLLSNKYNTDNE FMNVDFANNSNVNQNIDNYNAKIDVEHPSAFANFQYGAKISFIKTNNDNIYYDLISGSPVLDPELSDEFNYKENIQAAYF TGTKKINQKIDLQIGLRGEYTQTTGESEKLDQINKNDYFKLFPTVFFSYQKNEDNVFSFNYGRRIQRPSYSLLNPLRYFV NSNVSSQGNPNLQPAFIDSFEFSHTYKENLNTKISFMSKTNAFGVVFKLDESTQEQIVTQENFYTNYGFALTENYQLPIF SWWKTDNTLFLNYSVSNKTNNDVNASLKNGLEFYGSINNIFTFDKDGKIIGELNFWYNSPYKDNLFEYSQASSLDLAFTY KSIIKNLNLSMGLFDIFNSSVRKMSSEINGINQNYISYPSNRYFRISLNYMFGNDKIKSQKRNFGNEEERKRSN
Sequences:
>Translated_794_residues MKNTILILLIIIPFFSFSQVKINGTIKDETGLLSNVNVILSDDKDVTVKEIVTGQDGSFEFDVSKGIYKITISYLDYESF FQEISAENDIQLEPIILKRKENILEEVVIKNSGSLIKRKLDKTIFSVQNSPIASVGNGFDALKRAPGLILKNDEIVMLGK SSVRIMIEGKMVQLTGEELKNFLKTISATDIKEIEVITNPSSKYEVEGNSGIVNIIFKRSKKDSWSDNISATHIQAKYGK QSLNNNFSYRKDKINLSFITGYDYGDTFIDQRMEIYFKDSPLKLKTHQKQNENSFSTRLLFDYNMSSYDKVGIQYSGAFI KSNLKDNIHTDIYNSSNEIDYYLKANGNLDGKKDNHSVNLFYERKLDTLGKKIIFNVDYLNYNRDVHSNLLSNKYNTDNE FMNVDFANNSNVNQNIDNYNAKIDVEHPSAFANFQYGAKISFIKTNNDNIYYDLISGSPVLDPELSDEFNYKENIQAAYF TGTKKINQKIDLQIGLRGEYTQTTGESEKLDQINKNDYFKLFPTVFFSYQKNEDNVFSFNYGRRIQRPSYSLLNPLRYFV NSNVSSQGNPNLQPAFIDSFEFSHTYKENLNTKISFMSKTNAFGVVFKLDESTQEQIVTQENFYTNYGFALTENYQLPIF SWWKTDNTLFLNYSVSNKTNNDVNASLKNGLEFYGSINNIFTFDKDGKIIGELNFWYNSPYKDNLFEYSQASSLDLAFTY KSIIKNLNLSMGLFDIFNSSVRKMSSEINGINQNYISYPSNRYFRISLNYMFGNDKIKSQKRNFGNEEERKRSN >Mature_794_residues MKNTILILLIIIPFFSFSQVKINGTIKDETGLLSNVNVILSDDKDVTVKEIVTGQDGSFEFDVSKGIYKITISYLDYESF FQEISAENDIQLEPIILKRKENILEEVVIKNSGSLIKRKLDKTIFSVQNSPIASVGNGFDALKRAPGLILKNDEIVMLGK SSVRIMIEGKMVQLTGEELKNFLKTISATDIKEIEVITNPSSKYEVEGNSGIVNIIFKRSKKDSWSDNISATHIQAKYGK QSLNNNFSYRKDKINLSFITGYDYGDTFIDQRMEIYFKDSPLKLKTHQKQNENSFSTRLLFDYNMSSYDKVGIQYSGAFI KSNLKDNIHTDIYNSSNEIDYYLKANGNLDGKKDNHSVNLFYERKLDTLGKKIIFNVDYLNYNRDVHSNLLSNKYNTDNE FMNVDFANNSNVNQNIDNYNAKIDVEHPSAFANFQYGAKISFIKTNNDNIYYDLISGSPVLDPELSDEFNYKENIQAAYF TGTKKINQKIDLQIGLRGEYTQTTGESEKLDQINKNDYFKLFPTVFFSYQKNEDNVFSFNYGRRIQRPSYSLLNPLRYFV NSNVSSQGNPNLQPAFIDSFEFSHTYKENLNTKISFMSKTNAFGVVFKLDESTQEQIVTQENFYTNYGFALTENYQLPIF SWWKTDNTLFLNYSVSNKTNNDVNASLKNGLEFYGSINNIFTFDKDGKIIGELNFWYNSPYKDNLFEYSQASSLDLAFTY KSIIKNLNLSMGLFDIFNSSVRKMSSEINGINQNYISYPSNRYFRISLNYMFGNDKIKSQKRNFGNEEERKRSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91513; Mature: 91513
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTILILLIIIPFFSFSQVKINGTIKDETGLLSNVNVILSDDKDVTVKEIVTGQDGSFE CCCCEEEEEEHHHCCCCCEEEEEEEECCCCCCEECCEEEEECCCCCEEEHEECCCCCCEE FDVSKGIYKITISYLDYESFFQEISAENDIQLEPIILKRKENILEEVVIKNSGSLIKRKL EECCCCEEEEEEEEECHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHCCCCHHHHHHH DKTIFSVQNSPIASVGNGFDALKRAPGLILKNDEIVMLGKSSVRIMIEGKMVQLTGEELK HHHHHHCCCCCCHHCCCCHHHHHHCCCEEEECCCEEEEECCCEEEEEECEEEEECHHHHH NFLKTISATDIKEIEVITNPSSKYEVEGNSGIVNIIFKRSKKDSWSDNISATHIQAKYGK HHHHHHCCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEEHHCH QSLNNNFSYRKDKINLSFITGYDYGDTFIDQRMEIYFKDSPLKLKTHQKQNENSFSTRLL HHHCCCCCEEECEEEEEEEECCCCCCHHHCCCEEEEECCCCEEEEECCCCCCCCCEEEEE FDYNMSSYDKVGIQYSGAFIKSNLKDNIHTDIYNSSNEIDYYLKANGNLDGKKDNHSVNL EEECCCCCCCCCEEEECCEEECCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCEEEE FYERKLDTLGKKIIFNVDYLNYNRDVHSNLLSNKYNTDNEFMNVDFANNSNVNQNIDNYN EEECCHHHCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCC AKIDVEHPSAFANFQYGAKISFIKTNNDNIYYDLISGSPVLDPELSDEFNYKENIQAAYF CEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHCCEEEEE TGTKKINQKIDLQIGLRGEYTQTTGESEKLDQINKNDYFKLFPTVFFSYQKNEDNVFSFN ECCHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEEEEECCCCCEEEEE YGRRIQRPSYSLLNPLRYFVNSNVSSQGNPNLQPAFIDSFEFSHTYKENLNTKISFMSKT CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCEEEEEECC NAFGVVFKLDESTQEQIVTQENFYTNYGFALTENYQLPIFSWWKTDNTLFLNYSVSNKTN CCEEEEEEECCCHHHHHEECCCCEEECCEEEECCCCCCEEEEEECCCEEEEEEEECCCCC NDVNASLKNGLEFYGSINNIFTFDKDGKIIGELNFWYNSPYKDNLFEYSQASSLDLAFTY CCCCHHHHCCHHEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEH KSIIKNLNLSMGLFDIFNSSVRKMSSEINGINQNYISYPSNRYFRISLNYMFGNDKIKSQ HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEEEEEECCCHHHHH KRNFGNEEERKRSN HHCCCCHHHHHCCC >Mature Secondary Structure MKNTILILLIIIPFFSFSQVKINGTIKDETGLLSNVNVILSDDKDVTVKEIVTGQDGSFE CCCCEEEEEEHHHCCCCCEEEEEEEECCCCCCEECCEEEEECCCCCEEEHEECCCCCCEE FDVSKGIYKITISYLDYESFFQEISAENDIQLEPIILKRKENILEEVVIKNSGSLIKRKL EECCCCEEEEEEEEECHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHCCCCHHHHHHH DKTIFSVQNSPIASVGNGFDALKRAPGLILKNDEIVMLGKSSVRIMIEGKMVQLTGEELK HHHHHHCCCCCCHHCCCCHHHHHHCCCEEEECCCEEEEECCCEEEEEECEEEEECHHHHH NFLKTISATDIKEIEVITNPSSKYEVEGNSGIVNIIFKRSKKDSWSDNISATHIQAKYGK HHHHHHCCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEEHHCH QSLNNNFSYRKDKINLSFITGYDYGDTFIDQRMEIYFKDSPLKLKTHQKQNENSFSTRLL HHHCCCCCEEECEEEEEEEECCCCCCHHHCCCEEEEECCCCEEEEECCCCCCCCCEEEEE FDYNMSSYDKVGIQYSGAFIKSNLKDNIHTDIYNSSNEIDYYLKANGNLDGKKDNHSVNL EEECCCCCCCCCEEEECCEEECCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCEEEE FYERKLDTLGKKIIFNVDYLNYNRDVHSNLLSNKYNTDNEFMNVDFANNSNVNQNIDNYN EEECCHHHCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCC AKIDVEHPSAFANFQYGAKISFIKTNNDNIYYDLISGSPVLDPELSDEFNYKENIQAAYF CEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHCCEEEEE TGTKKINQKIDLQIGLRGEYTQTTGESEKLDQINKNDYFKLFPTVFFSYQKNEDNVFSFN ECCHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEEEEECCCCCEEEEE YGRRIQRPSYSLLNPLRYFVNSNVSSQGNPNLQPAFIDSFEFSHTYKENLNTKISFMSKT CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCEEEEEECC NAFGVVFKLDESTQEQIVTQENFYTNYGFALTENYQLPIFSWWKTDNTLFLNYSVSNKTN CCEEEEEEECCCHHHHHEECCCCEEECCEEEECCCCCCEEEEEECCCEEEEEEEECCCCC NDVNASLKNGLEFYGSINNIFTFDKDGKIIGELNFWYNSPYKDNLFEYSQASSLDLAFTY CCCCHHHHCCHHEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEH KSIIKNLNLSMGLFDIFNSSVRKMSSEINGINQNYISYPSNRYFRISLNYMFGNDKIKSQ HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEEEEEECCCHHHHH KRNFGNEEERKRSN HHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA