| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299854
Identifier: 146299854
GI number: 146299854
Start: 2520964
End: 2522571
Strand: Direct
Name: 146299854
Synonym: Fjoh_2096
Alternate gene names: NA
Gene position: 2520964-2522571 (Clockwise)
Preceding gene: 146299853
Following gene: 146299855
Centisome position: 41.35
GC content: 31.34
Gene sequence:
>1608_bases ATGGAACTAAATACAAATCAATATTATTTAAAATTAAACGTAGCAATTGAATCGTTAGTAGATAAATGGTATGCTTGGTC ATACTTAATATCGCCTGCAACTGCAGCAATGAACATAAAAGACAGACATTTAAAAATCATGGAATCCTATATCAAGAATC CTAGTGTACATGCCGCTGCTGTCGAAAATCCTAAAATGTTAGGCGGACCATTTATTGATTATAAAGGAAAAAGAGTAGAT GAAATTAAGTCTCTATACGATGAAACCTTAGAAAAAAGAGCTGATTTACTAGAGTTAAGAGAAGCAATTTTAGAACTAAA TGAAATATTAAGAAAAGAAGCCAAAGGATATTCTTTAAACCTTTTATATGACAAAGTTCCTGAAATTTTAAAAGGTTATG TTGAGTTATATTATGACCTTAACAATAATCCAAATTTCAGATTTTTTGAAAATTTATTGTATAAAAGTAAATATTACGAT GAGTCAGCACAAACGATCTCTTTACAATTAGTAGAAGCAGATGACTCCCGTTCTTTTGTTTTAAGTACGCCAAGATTAGA TGACGATAATTTAGTTCACTTAGATATACCATTTAAATCAGAAGTTATAGATGAACTTTTTAAAATGAAAGAAACTCCAA ATGATTACAATAAAATAAAACAACTTTTAGGAGTAAGTGATAATCAGGAAGAATTGTTTAAACAATTTTTTACAAAAGAA GCACCGCCAAAATTTACAAAATATAGTGGTTCTGGAGTTAGAACAAGATATTTTGGACATGCATGTGTTCTGGTAGAAAC AAATGAGATTTCTATTCTTGTTGATCCGGTAATTAGTTATGACGGATACGAAAAAGAAGTTAACAGATATACAATCAGCG ATTTACCGGATCAAATAGATTATGTATTGATAACACATAATCATCAGGATCATATATTGTTAGAGACTTTATTACAGTTA AGACATCGTATCAAACATATAATTGTTCCCAGCAGCGGAAAAGGAAACCTGCAGGATCCAAGTATCAAAATGATGTTTAA TGCCATTGGTTTTAACAATGTAATCCAATTAGACGAAATGCAAAATATTGAAATGCATGGCTGTACTATAACCGGATTAC CATTTTTAGGAGAACATTCGGATATCGATATTAGAAGTAAATTATGCTATCATATTGCATTGCATAATGATTTAAAAATT CTATTTACAGCAGACTCCTGCAATATTGAACCTAAAATTTATCAAAAAATCCATGAAGTTCTTGGAGATGCAGATGTTTT ATTTTTAGGTATGGAATGCGATGGAGCACCTCTTTCCTGGCTTTATGGGCCATTAATGCCGGAAAAATTAGACAGGGAAA AAGATTTATCCAGAAGATTAGCAGGTTGTGACAGCAAGCAGGGAATGTCACTGGTTGATATTTTTAAACCAAGAAATGTC TTTGTTTATGCAATGGGATTAGAGCCTTGGCTGGAATTTATCAGTTCAATTAAATATACAGATGAGTCACGTCCTATTGT AGAATCTAACCAGCTTGTAGCAGAATGCATAGAAAGAGGTATAGATGCAGAAAGACTGTTTGGAGAAAAAACTATTGAGT ATAAATAA
Upstream 100 bases:
>100_bases TGGCATTAGAAATATCAAACAAAGCCTGGTACGAGTATCAATTGAGTGAAGAGAATATATCAGACAAAGTAGTTATTTAA TAAGTAAAAAATCGAATAAA
Downstream 100 bases:
>100_bases AAAAGATGCTGAATGCTTTTTCTAATTAATAAATCTTAAAAATAAAATTTGTCATGAAAAATCATATAAATAATCTGCTT AACAAATTAAAGGAACACCA
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Antibiotic Biosynthesis Protein; Thioester Reductase; Beta-Lactamase Domain-Containing Protein; Tyrosine Beta-Hydroxylase; Beta-Lactamase Domain Protein
Number of amino acids: Translated: 535; Mature: 535
Protein sequence:
>535_residues MELNTNQYYLKLNVAIESLVDKWYAWSYLISPATAAMNIKDRHLKIMESYIKNPSVHAAAVENPKMLGGPFIDYKGKRVD EIKSLYDETLEKRADLLELREAILELNEILRKEAKGYSLNLLYDKVPEILKGYVELYYDLNNNPNFRFFENLLYKSKYYD ESAQTISLQLVEADDSRSFVLSTPRLDDDNLVHLDIPFKSEVIDELFKMKETPNDYNKIKQLLGVSDNQEELFKQFFTKE APPKFTKYSGSGVRTRYFGHACVLVETNEISILVDPVISYDGYEKEVNRYTISDLPDQIDYVLITHNHQDHILLETLLQL RHRIKHIIVPSSGKGNLQDPSIKMMFNAIGFNNVIQLDEMQNIEMHGCTITGLPFLGEHSDIDIRSKLCYHIALHNDLKI LFTADSCNIEPKIYQKIHEVLGDADVLFLGMECDGAPLSWLYGPLMPEKLDREKDLSRRLAGCDSKQGMSLVDIFKPRNV FVYAMGLEPWLEFISSIKYTDESRPIVESNQLVAECIERGIDAERLFGEKTIEYK
Sequences:
>Translated_535_residues MELNTNQYYLKLNVAIESLVDKWYAWSYLISPATAAMNIKDRHLKIMESYIKNPSVHAAAVENPKMLGGPFIDYKGKRVD EIKSLYDETLEKRADLLELREAILELNEILRKEAKGYSLNLLYDKVPEILKGYVELYYDLNNNPNFRFFENLLYKSKYYD ESAQTISLQLVEADDSRSFVLSTPRLDDDNLVHLDIPFKSEVIDELFKMKETPNDYNKIKQLLGVSDNQEELFKQFFTKE APPKFTKYSGSGVRTRYFGHACVLVETNEISILVDPVISYDGYEKEVNRYTISDLPDQIDYVLITHNHQDHILLETLLQL RHRIKHIIVPSSGKGNLQDPSIKMMFNAIGFNNVIQLDEMQNIEMHGCTITGLPFLGEHSDIDIRSKLCYHIALHNDLKI LFTADSCNIEPKIYQKIHEVLGDADVLFLGMECDGAPLSWLYGPLMPEKLDREKDLSRRLAGCDSKQGMSLVDIFKPRNV FVYAMGLEPWLEFISSIKYTDESRPIVESNQLVAECIERGIDAERLFGEKTIEYK >Mature_535_residues MELNTNQYYLKLNVAIESLVDKWYAWSYLISPATAAMNIKDRHLKIMESYIKNPSVHAAAVENPKMLGGPFIDYKGKRVD EIKSLYDETLEKRADLLELREAILELNEILRKEAKGYSLNLLYDKVPEILKGYVELYYDLNNNPNFRFFENLLYKSKYYD ESAQTISLQLVEADDSRSFVLSTPRLDDDNLVHLDIPFKSEVIDELFKMKETPNDYNKIKQLLGVSDNQEELFKQFFTKE APPKFTKYSGSGVRTRYFGHACVLVETNEISILVDPVISYDGYEKEVNRYTISDLPDQIDYVLITHNHQDHILLETLLQL RHRIKHIIVPSSGKGNLQDPSIKMMFNAIGFNNVIQLDEMQNIEMHGCTITGLPFLGEHSDIDIRSKLCYHIALHNDLKI LFTADSCNIEPKIYQKIHEVLGDADVLFLGMECDGAPLSWLYGPLMPEKLDREKDLSRRLAGCDSKQGMSLVDIFKPRNV FVYAMGLEPWLEFISSIKYTDESRPIVESNQLVAECIERGIDAERLFGEKTIEYK
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61737; Mature: 61737
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNTNQYYLKLNVAIESLVDKWYAWSYLISPATAAMNIKDRHLKIMESYIKNPSVHAAA CCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHHHCCCCEEEEE VENPKMLGGPFIDYKGKRVDEIKSLYDETLEKRADLLELREAILELNEILRKEAKGYSLN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LLYDKVPEILKGYVELYYDLNNNPNFRFFENLLYKSKYYDESAQTISLQLVEADDSRSFV EHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEE LSTPRLDDDNLVHLDIPFKSEVIDELFKMKETPNDYNKIKQLLGVSDNQEELFKQFFTKE EECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCC APPKFTKYSGSGVRTRYFGHACVLVETNEISILVDPVISYDGYEKEVNRYTISDLPDQID CCCCCEECCCCCCEEEEECEEEEEEECCCEEEEEECHHCCCCCHHHHCEEEHHCCCCCCC YVLITHNHQDHILLETLLQLRHRIKHIIVPSSGKGNLQDPSIKMMFNAIGFNNVIQLDEM EEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEECCCCCCEEEECCC QNIEMHGCTITGLPFLGEHSDIDIRSKLCYHIALHNDLKILFTADSCNIEPKIYQKIHEV CCCEECCEEEECCCCCCCCCCCCHHHHHEEEEEEECCEEEEEEECCCCCCHHHHHHHHHH LGDADVLFLGMECDGAPLSWLYGPLMPEKLDREKDLSRRLAGCDSKQGMSLVDIFKPRNV HCCCEEEEEEECCCCCCHHHHHCCCCHHHHCHHHHHHHHHHCCCCCCCCCCEEEECCCCE FVYAMGLEPWLEFISSIKYTDESRPIVESNQLVAECIERGIDAERLFGEKTIEYK EEEEECHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCC >Mature Secondary Structure MELNTNQYYLKLNVAIESLVDKWYAWSYLISPATAAMNIKDRHLKIMESYIKNPSVHAAA CCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHHHCCCCEEEEE VENPKMLGGPFIDYKGKRVDEIKSLYDETLEKRADLLELREAILELNEILRKEAKGYSLN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LLYDKVPEILKGYVELYYDLNNNPNFRFFENLLYKSKYYDESAQTISLQLVEADDSRSFV EHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEE LSTPRLDDDNLVHLDIPFKSEVIDELFKMKETPNDYNKIKQLLGVSDNQEELFKQFFTKE EECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCC APPKFTKYSGSGVRTRYFGHACVLVETNEISILVDPVISYDGYEKEVNRYTISDLPDQID CCCCCEECCCCCCEEEEECEEEEEEECCCEEEEEECHHCCCCCHHHHCEEEHHCCCCCCC YVLITHNHQDHILLETLLQLRHRIKHIIVPSSGKGNLQDPSIKMMFNAIGFNNVIQLDEM EEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEECCCCCCEEEECCC QNIEMHGCTITGLPFLGEHSDIDIRSKLCYHIALHNDLKILFTADSCNIEPKIYQKIHEV CCCEECCEEEECCCCCCCCCCCCHHHHHEEEEEEECCEEEEEEECCCCCCHHHHHHHHHH LGDADVLFLGMECDGAPLSWLYGPLMPEKLDREKDLSRRLAGCDSKQGMSLVDIFKPRNV HCCCEEEEEEECCCCCCHHHHHCCCCHHHHCHHHHHHHHHHCCCCCCCCCCEEEECCCCE FVYAMGLEPWLEFISSIKYTDESRPIVESNQLVAECIERGIDAERLFGEKTIEYK EEEEECHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA