| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299793
Identifier: 146299793
GI number: 146299793
Start: 2390021
End: 2390986
Strand: Direct
Name: 146299793
Synonym: Fjoh_2034
Alternate gene names: NA
Gene position: 2390021-2390986 (Clockwise)
Preceding gene: 146299792
Following gene: 146299794
Centisome position: 39.2
GC content: 38.92
Gene sequence:
>966_bases ATGAGTAGTATTCCTTGGCAAGACAGACCCGAAAACAGTAAAGATGTGATGTGGAGATATTCTGAAAATCCAATTATCGA CAGATATGCAATACCGTCATCAAACAGTATTTTTAATAGTGCTGTAGTTCCTTTTGGAGATGGTTATGCGGGAGTTTTCA GATGTGATAACAAAGCGGTTCAAATGAATATTTTTGCCGGTTTTAGTAAAAACGGAATCGATTGGAACATTAACCACGAA CCAATCGTAATGCAGTCTGGTAATACAGACATGATCGAATCTGCTTACAAATACGATCCACGTGTGGTTTTCATCGAAGA CCGTTACTGGATTACATGGTGTAATGGTTACAACGGACCAACTATTGGTATTGGATATACTTTTGACTTTAAAGAGTTTT TTCAATGCGAAAATGCCTTTTTACCATTCAACAGAAACGGAGTTTTATTCCCTCAAAAAATAAACGGAAAATACGCAATG TTAAGCCGTCCAAGTGATAACGGACATACTCCTTTTGGAGATATCTGGATTAGCTACAGCCCGGACATGAAATATTGGGG AGAACACCGTTTGGTAATGAAACCAAGTCCATTTGAGCAAAGTGCCTGGCAGTGTACAAAAGTAGGAGCAGGACCAATTC CTATTTTAACAAACGAAGGCTGGCTGATGATCTATCACGGAGTTATCAATACCTGCAACGGTTTCCGTTATGCAATGGGT TCTGCACTTCTGGATGTTGATTCACCAGACAAAGTAAAATACAGAACACAGCCTTATTTATTAGGACCAGCAGAAATTTA TGAAATGGTAGGAGACGTGCCAAACGTAGTTTTTCCATGTGCCGCTTTACACGATACAGAGGAAGATAAACTGGCTGTTT ATTACGGTGCAGCCGATACTGCTGTAGCCATTGCATTTGGTAAATTAAGTGAAGTAATTCAGTTTACAAAAGATAACAGT TTATAG
Upstream 100 bases:
>100_bases CAAGTGAAACGCCTTTAAGCGATTTTCAAAACTATGTTTCTATGTGTTTAGTAAATGACAAAAGTGAGAGAATAAAACAA ACAATAAAAAAACAAAAAAA
Downstream 100 bases:
>100_bases AAAAAGCATGCGTTTAAAATTCCAATGGTTAACAGTTGTTTTAGTTTCTCTTTCGGCGGCAGGTTTTGCGCAGTCAAAGA AAAATACGATTATTCCTAAA
Product: PH1107-like glycosidase
Products: NA
Alternate protein names: Glycosidase Related Protein; Glycosylase; Glycosidase-Like Protein; Conserved Domain Protein; Glycosidase-Related; Glycosidase-Related Protein; Cytoplasmic Protein; Glycosylase-Like Protein; Unknwon Conserved Protein
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSSIPWQDRPENSKDVMWRYSENPIIDRYAIPSSNSIFNSAVVPFGDGYAGVFRCDNKAVQMNIFAGFSKNGIDWNINHE PIVMQSGNTDMIESAYKYDPRVVFIEDRYWITWCNGYNGPTIGIGYTFDFKEFFQCENAFLPFNRNGVLFPQKINGKYAM LSRPSDNGHTPFGDIWISYSPDMKYWGEHRLVMKPSPFEQSAWQCTKVGAGPIPILTNEGWLMIYHGVINTCNGFRYAMG SALLDVDSPDKVKYRTQPYLLGPAEIYEMVGDVPNVVFPCAALHDTEEDKLAVYYGAADTAVAIAFGKLSEVIQFTKDNS L
Sequences:
>Translated_321_residues MSSIPWQDRPENSKDVMWRYSENPIIDRYAIPSSNSIFNSAVVPFGDGYAGVFRCDNKAVQMNIFAGFSKNGIDWNINHE PIVMQSGNTDMIESAYKYDPRVVFIEDRYWITWCNGYNGPTIGIGYTFDFKEFFQCENAFLPFNRNGVLFPQKINGKYAM LSRPSDNGHTPFGDIWISYSPDMKYWGEHRLVMKPSPFEQSAWQCTKVGAGPIPILTNEGWLMIYHGVINTCNGFRYAMG SALLDVDSPDKVKYRTQPYLLGPAEIYEMVGDVPNVVFPCAALHDTEEDKLAVYYGAADTAVAIAFGKLSEVIQFTKDNS L >Mature_320_residues SSIPWQDRPENSKDVMWRYSENPIIDRYAIPSSNSIFNSAVVPFGDGYAGVFRCDNKAVQMNIFAGFSKNGIDWNINHEP IVMQSGNTDMIESAYKYDPRVVFIEDRYWITWCNGYNGPTIGIGYTFDFKEFFQCENAFLPFNRNGVLFPQKINGKYAML SRPSDNGHTPFGDIWISYSPDMKYWGEHRLVMKPSPFEQSAWQCTKVGAGPIPILTNEGWLMIYHGVINTCNGFRYAMGS ALLDVDSPDKVKYRTQPYLLGPAEIYEMVGDVPNVVFPCAALHDTEEDKLAVYYGAADTAVAIAFGKLSEVIQFTKDNSL
Specific function: Unknown
COG id: COG2152
COG function: function code G; Predicted glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36312; Mature: 36181
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIPWQDRPENSKDVMWRYSENPIIDRYAIPSSNSIFNSAVVPFGDGYAGVFRCDNKAV CCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCEE QMNIFAGFSKNGIDWNINHEPIVMQSGNTDMIESAYKYDPRVVFIEDRYWITWCNGYNGP EEEEEECCCCCCCEEECCCCEEEEECCCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCC TIGIGYTFDFKEFFQCENAFLPFNRNGVLFPQKINGKYAMLSRPSDNGHTPFGDIWISYS EEEEEEEECHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEC PDMKYWGEHRLVMKPSPFEQSAWQCTKVGAGPIPILTNEGWLMIYHGVINTCNGFRYAMG CCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCEEEECCCEEEEEECHHCCCCCCEEHHC SALLDVDSPDKVKYRTQPYLLGPAEIYEMVGDVPNVVFPCAALHDTEEDKLAVYYGAADT CEEEECCCCCCEEEECCCEEECHHHHHHHHCCCCCHHCCHHHHCCCCCCCEEEEECCCCC AVAIAFGKLSEVIQFTKDNSL EEEEEHHHHHHHHHHHCCCCC >Mature Secondary Structure SSIPWQDRPENSKDVMWRYSENPIIDRYAIPSSNSIFNSAVVPFGDGYAGVFRCDNKAV CCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCEE QMNIFAGFSKNGIDWNINHEPIVMQSGNTDMIESAYKYDPRVVFIEDRYWITWCNGYNGP EEEEEECCCCCCCEEECCCCEEEEECCCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCC TIGIGYTFDFKEFFQCENAFLPFNRNGVLFPQKINGKYAMLSRPSDNGHTPFGDIWISYS EEEEEEEECHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEC PDMKYWGEHRLVMKPSPFEQSAWQCTKVGAGPIPILTNEGWLMIYHGVINTCNGFRYAMG CCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCEEEECCCEEEEEECHHCCCCCCEEHHC SALLDVDSPDKVKYRTQPYLLGPAEIYEMVGDVPNVVFPCAALHDTEEDKLAVYYGAADT CEEEECCCCCCEEEECCCEEECHHHHHHHHCCCCCHHCCHHHHCCCCCCCEEEEECCCCC AVAIAFGKLSEVIQFTKDNSL EEEEEHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA