| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299782
Identifier: 146299782
GI number: 146299782
Start: 2372184
End: 2373212
Strand: Direct
Name: 146299782
Synonym: Fjoh_2023
Alternate gene names: NA
Gene position: 2372184-2373212 (Clockwise)
Preceding gene: 146299781
Following gene: 146299783
Centisome position: 38.91
GC content: 38.19
Gene sequence:
>1029_bases ATGAAAAAAAATACAATAAAACAGCTCTTTTTTCTGCTGGTAATTTTGGCTGGATTTTCTGTGAAAGCACAACAGCCAGA TCCGCCGGGACAAGTTAAGGGAAATGAAAAACCAAAAAACGAAGCCTATCTTTTTGCGCACATGACGCACAACGATTATG GCAGATTATACTATTCTGTAAGTTTAGACGGTTTACATTGGGAAAACCTCAACAGCGGAAAACGCGTTTTTGAAGATTAC AAAGGACATCCCGATATCTGTAAAGGACCAGACGGGAAATATTACATCGCAGGAAATACAGGCGACGATGCAAAAAGTAT TAACATCTGGGTTTCAGATGATTTAATTACCTGGAAAAAGCATTCAGATTATACACCGGATTTAAAAAGCACACCCGATT ATTCTAACGCCTTACAGCGAATTGGTGCTCCAAAATTATATTACGACAAAGATTCAGAAAAGTTTATCATGACGTGGCAT ACGCCGCATCTTGAAGGAACAAAAGAAGACGGAGAACGTTATTGGGCAAGTCAAAGAACTTTATATGTTTTGTCGAAAGA TTTAAAAACTTTTGAAGGAACACCAAATCGTTTATTCGACTGGGATATGGGAACCATTGATGTTTTTATTCGTAAAGTCG GCGATTCTTATTATGCCATAATTAAAGACGAAACCTACCCAACTTTGTATTGGACAACCGGAAAAACCATCCGAATTGCC AAATCAAAAAATCTTTTAGGACCTTATTCTTTGCCCCAGCAGTCTATCAGTCCAAACTTTAGAGAAGCGCCAATGCTGAT TCCTTCTCCAGATGACAAAATATGGTACATGTATTACGAGCAATATCCGGGAGTTTCTTACGGATTATCAATTGCAGATA ACCTAAACGGACCTTGGTACCAAGCCTCAGGTTACACTTTTTTCTCAGATTGGGACAAATATAGTCTTCCAGAAAAAGTG CGCCACGGCTGCATGATTACAATCTCTAAAAAAGAATACGACAGTTTGGTGAAAAGGTTCAAAAAATAA
Upstream 100 bases:
>100_bases AAATGCCTTTTGCAGACAAAGTAAAGCTATGTCTCTATGTGTTTAAAAAATCATTTTAATCTGTGGAATCTGTGGCAAAA ACATTTTAATTTTTAGCAAC
Downstream 100 bases:
>100_bases TGGTGAATTGTGAATTATCAATTGTGAATCATTAACAATTTACCATTAACAATTCACAATTAAAGATACGGTTAGTTAAG TTAGTTTAAGTGTTTGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Beta-Galactosidase I; Glycosyl Hydrolase Family; Beta-Fructosidase Superfamily Protein; Xylosidase/Arabinofuranosidase; Hydrolase; Alpha-L-Arabinofuranosidase B; Alpha-N-Arabinofuranosidase
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKKNTIKQLFFLLVILAGFSVKAQQPDPPGQVKGNEKPKNEAYLFAHMTHNDYGRLYYSVSLDGLHWENLNSGKRVFEDY KGHPDICKGPDGKYYIAGNTGDDAKSINIWVSDDLITWKKHSDYTPDLKSTPDYSNALQRIGAPKLYYDKDSEKFIMTWH TPHLEGTKEDGERYWASQRTLYVLSKDLKTFEGTPNRLFDWDMGTIDVFIRKVGDSYYAIIKDETYPTLYWTTGKTIRIA KSKNLLGPYSLPQQSISPNFREAPMLIPSPDDKIWYMYYEQYPGVSYGLSIADNLNGPWYQASGYTFFSDWDKYSLPEKV RHGCMITISKKEYDSLVKRFKK
Sequences:
>Translated_342_residues MKKNTIKQLFFLLVILAGFSVKAQQPDPPGQVKGNEKPKNEAYLFAHMTHNDYGRLYYSVSLDGLHWENLNSGKRVFEDY KGHPDICKGPDGKYYIAGNTGDDAKSINIWVSDDLITWKKHSDYTPDLKSTPDYSNALQRIGAPKLYYDKDSEKFIMTWH TPHLEGTKEDGERYWASQRTLYVLSKDLKTFEGTPNRLFDWDMGTIDVFIRKVGDSYYAIIKDETYPTLYWTTGKTIRIA KSKNLLGPYSLPQQSISPNFREAPMLIPSPDDKIWYMYYEQYPGVSYGLSIADNLNGPWYQASGYTFFSDWDKYSLPEKV RHGCMITISKKEYDSLVKRFKK >Mature_342_residues MKKNTIKQLFFLLVILAGFSVKAQQPDPPGQVKGNEKPKNEAYLFAHMTHNDYGRLYYSVSLDGLHWENLNSGKRVFEDY KGHPDICKGPDGKYYIAGNTGDDAKSINIWVSDDLITWKKHSDYTPDLKSTPDYSNALQRIGAPKLYYDKDSEKFIMTWH TPHLEGTKEDGERYWASQRTLYVLSKDLKTFEGTPNRLFDWDMGTIDVFIRKVGDSYYAIIKDETYPTLYWTTGKTIRIA KSKNLLGPYSLPQQSISPNFREAPMLIPSPDDKIWYMYYEQYPGVSYGLSIADNLNGPWYQASGYTFFSDWDKYSLPEKV RHGCMITISKKEYDSLVKRFKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39630; Mature: 39630
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNTIKQLFFLLVILAGFSVKAQQPDPPGQVKGNEKPKNEAYLFAHMTHNDYGRLYYSV CCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEE SLDGLHWENLNSGKRVFEDYKGHPDICKGPDGKYYIAGNTGDDAKSINIWVSDDLITWKK EECCEEECCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCEEEECC HSDYTPDLKSTPDYSNALQRIGAPKLYYDKDSEKFIMTWHTPHLEGTKEDGERYWASQRT CCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHCCCE LYVLSKDLKTFEGTPNRLFDWDMGTIDVFIRKVGDSYYAIIKDETYPTLYWTTGKTIRIA EEEEECCHHHHCCCCCCEEECCCCHHHHHHHHHCCCEEEEEECCCCCEEEEECCCEEEEE KSKNLLGPYSLPQQSISPNFREAPMLIPSPDDKIWYMYYEQYPGVSYGLSIADNLNGPWY ECCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCEEEEEEECCCCCEECEEEECCCCCCEE QASGYTFFSDWDKYSLPEKVRHGCMITISKKEYDSLVKRFKK ECCCEEEECCCCCCCCCHHHCCCEEEEEEHHHHHHHHHHHCC >Mature Secondary Structure MKKNTIKQLFFLLVILAGFSVKAQQPDPPGQVKGNEKPKNEAYLFAHMTHNDYGRLYYSV CCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEE SLDGLHWENLNSGKRVFEDYKGHPDICKGPDGKYYIAGNTGDDAKSINIWVSDDLITWKK EECCEEECCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCEEEECC HSDYTPDLKSTPDYSNALQRIGAPKLYYDKDSEKFIMTWHTPHLEGTKEDGERYWASQRT CCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHCCCE LYVLSKDLKTFEGTPNRLFDWDMGTIDVFIRKVGDSYYAIIKDETYPTLYWTTGKTIRIA EEEEECCHHHHCCCCCCEEECCCCHHHHHHHHHCCCEEEEEECCCCCEEEEECCCEEEEE KSKNLLGPYSLPQQSISPNFREAPMLIPSPDDKIWYMYYEQYPGVSYGLSIADNLNGPWY ECCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCEEEEEEECCCCCEECEEEECCCCCCEE QASGYTFFSDWDKYSLPEKVRHGCMITISKKEYDSLVKRFKK ECCCEEEECCCCCCCCCHHHCCCEEEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA