| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is uxuA [H]
Identifier: 146299755
GI number: 146299755
Start: 2328556
End: 2329719
Strand: Direct
Name: uxuA [H]
Synonym: Fjoh_1995
Alternate gene names: 146299755
Gene position: 2328556-2329719 (Clockwise)
Preceding gene: 146299754
Following gene: 146299756
Centisome position: 38.19
GC content: 36.0
Gene sequence:
>1164_bases ATGCAGCAAACCATGAGATGGTTCGGACCAAACGACAATGTCAAATTAATTGACATTCGGCAAGCTGGCGCAGCGGGAAT TGTAACCGCATTGCATCAAATTCCGGTTGGCGATGTCTGGACAGTTGATGCAATAAAAGAAAGACAGGAAATTATTCGTA ATTCCGGCTTGGAATGGACTGTGGTTGAAAGTCTTCCTGTTCATGAAGAAATTAAACGAGCTTCTGGAAATTATCTGCAA TACATCGAGAATTATAAAATCAGTTTGCAAAATCTGGCAGAATGCGGTATCAAAATCATTACCTATAATTTTATGCCGAT TTTGGATTGGGTTCGAACGAATCATAATTTTATCAATGAAGATGGAAGCAGAGCTTTGCTTTACAATCAGGATGCATTTA CTTATTTTGATGTTTTTCTTTTAAAAAGACCAAATTCAGAAAACGATTATTCAGATGCTGAAAAAGAAAAAGCTTTGCAG TTTGGGAATCAATTGTCTGAAGATGAAAAAGCACTTTTGTTTAAAAATGTTTTATTAGGACTGCCGGGAAGTAAAATCAA TTTTACGGCCGAACAGATTTTGTCTCTTTTAGAAAATTATGCCGAAATCGACAATCAAAAACTAAGAGAAAATCTGATTT ATTTTTTATCAGAAGTAACTCCGATTGCGGAGAAAAACCAACAAAAATTAGCGATTCATCCAGATGATCCGCCGTTTTCG GTTTTAGGACTTCCGAGAATTGTTTCAACCGAAGCCGATTTAAAAGCTATTTTTAATGCCGTTCCTTCAACTGCCAATGG TTTATGTTATTGTACAGGTTCGTTAAGTGCAGACCCAAAAAACAATCTTGAAAAAATTATAGCCGATTTTGGAGATAGAA TTCACTTTTTACATCTTCGAAATACCATCCGCGAAAGCGAAACTATTTTTAGAGAATCAGAGCATTTAAACGGTGACGTT AAAATGGAAATTATCGTTGAGAAATTATTGCTGTTGATGAACAAAACCCAAATAAGCCTGCCAATGCGTCCCGATCATGG TTTCCTTCACAGAGTTGATGAAGCAATAGAAACCTATCCGGGTTATTCTTTGACAGGAAGACTAAAAGGGCTTGCTGAAT TAAGAGGTTTAGAAATGGGAATTGCTTATAAACTGAATTTGTAA
Upstream 100 bases:
>100_bases TGTGTTAGGAACTTGTTTCTTTTAAGTCTTTTTTCGAGTTAATATAAATCTATGTTTCTATGTGTTTAATTAATTTTTAC AAAAGTTAAGTATGATAAAA
Downstream 100 bases:
>100_bases TTTTTTTTCGTGTTAAACTGACTGGTTTTAAAAACCTGATAGTTCTGCGATGAGAAAAAAAAGTCCTGTTTATCATTTCG AGAATAAAAAGTAAGTATTA
Product: mannonate dehydratase
Products: NA
Alternate protein names: D-mannonate hydrolase [H]
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MQQTMRWFGPNDNVKLIDIRQAGAAGIVTALHQIPVGDVWTVDAIKERQEIIRNSGLEWTVVESLPVHEEIKRASGNYLQ YIENYKISLQNLAECGIKIITYNFMPILDWVRTNHNFINEDGSRALLYNQDAFTYFDVFLLKRPNSENDYSDAEKEKALQ FGNQLSEDEKALLFKNVLLGLPGSKINFTAEQILSLLENYAEIDNQKLRENLIYFLSEVTPIAEKNQQKLAIHPDDPPFS VLGLPRIVSTEADLKAIFNAVPSTANGLCYCTGSLSADPKNNLEKIIADFGDRIHFLHLRNTIRESETIFRESEHLNGDV KMEIIVEKLLLLMNKTQISLPMRPDHGFLHRVDEAIETYPGYSLTGRLKGLAELRGLEMGIAYKLNL
Sequences:
>Translated_387_residues MQQTMRWFGPNDNVKLIDIRQAGAAGIVTALHQIPVGDVWTVDAIKERQEIIRNSGLEWTVVESLPVHEEIKRASGNYLQ YIENYKISLQNLAECGIKIITYNFMPILDWVRTNHNFINEDGSRALLYNQDAFTYFDVFLLKRPNSENDYSDAEKEKALQ FGNQLSEDEKALLFKNVLLGLPGSKINFTAEQILSLLENYAEIDNQKLRENLIYFLSEVTPIAEKNQQKLAIHPDDPPFS VLGLPRIVSTEADLKAIFNAVPSTANGLCYCTGSLSADPKNNLEKIIADFGDRIHFLHLRNTIRESETIFRESEHLNGDV KMEIIVEKLLLLMNKTQISLPMRPDHGFLHRVDEAIETYPGYSLTGRLKGLAELRGLEMGIAYKLNL >Mature_387_residues MQQTMRWFGPNDNVKLIDIRQAGAAGIVTALHQIPVGDVWTVDAIKERQEIIRNSGLEWTVVESLPVHEEIKRASGNYLQ YIENYKISLQNLAECGIKIITYNFMPILDWVRTNHNFINEDGSRALLYNQDAFTYFDVFLLKRPNSENDYSDAEKEKALQ FGNQLSEDEKALLFKNVLLGLPGSKINFTAEQILSLLENYAEIDNQKLRENLIYFLSEVTPIAEKNQQKLAIHPDDPPFS VLGLPRIVSTEADLKAIFNAVPSTANGLCYCTGSLSADPKNNLEKIIADFGDRIHFLHLRNTIRESETIFRESEHLNGDV KMEIIVEKLLLLMNKTQISLPMRPDHGFLHRVDEAIETYPGYSLTGRLKGLAELRGLEMGIAYKLNL
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1312
COG function: function code G; D-mannonate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannonate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI1790778, Length=387, Percent_Identity=48.3204134366925, Blast_Score=393, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004628 - InterPro: IPR013022 [H]
Pfam domain/function: PF03786 UxuA [H]
EC number: =4.2.1.8 [H]
Molecular weight: Translated: 43995; Mature: 43995
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQTMRWFGPNDNVKLIDIRQAGAAGIVTALHQIPVGDVWTVDAIKERQEIIRNSGLEWT CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCEE VVESLPVHEEIKRASGNYLQYIENYKISLQNLAECGIKIITYNFMPILDWVRTNHNFINE EECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHCCCCCCCC DGSRALLYNQDAFTYFDVFLLKRPNSENDYSDAEKEKALQFGNQLSEDEKALLFKNVLLG CCCEEEEECCCCHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHC LPGSKINFTAEQILSLLENYAEIDNQKLRENLIYFLSEVTPIAEKNQQKLAIHPDDPPFS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCH VLGLPRIVSTEADLKAIFNAVPSTANGLCYCTGSLSADPKNNLEKIIADFGDRIHFLHLR HCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEHHH NTIRESETIFRESEHLNGDVKMEIIVEKLLLLMNKTQISLPMRPDHGFLHRVDEAIETYP HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCC GYSLTGRLKGLAELRGLEMGIAYKLNL CCEEHHHHHHHHHHCCCEECEEEEECC >Mature Secondary Structure MQQTMRWFGPNDNVKLIDIRQAGAAGIVTALHQIPVGDVWTVDAIKERQEIIRNSGLEWT CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCEE VVESLPVHEEIKRASGNYLQYIENYKISLQNLAECGIKIITYNFMPILDWVRTNHNFINE EECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHCCCCCCCC DGSRALLYNQDAFTYFDVFLLKRPNSENDYSDAEKEKALQFGNQLSEDEKALLFKNVLLG CCCEEEEECCCCHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHC LPGSKINFTAEQILSLLENYAEIDNQKLRENLIYFLSEVTPIAEKNQQKLAIHPDDPPFS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCH VLGLPRIVSTEADLKAIFNAVPSTANGLCYCTGSLSADPKNNLEKIIADFGDRIHFLHLR HCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEHHH NTIRESETIFRESEHLNGDVKMEIIVEKLLLLMNKTQISLPMRPDHGFLHRVDEAIETYP HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCC GYSLTGRLKGLAELRGLEMGIAYKLNL CCEEHHHHHHHHHHCCCEECEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]