| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299746
Identifier: 146299746
GI number: 146299746
Start: 2317140
End: 2318054
Strand: Direct
Name: 146299746
Synonym: Fjoh_1986
Alternate gene names: NA
Gene position: 2317140-2318054 (Clockwise)
Preceding gene: 146299745
Following gene: 146299749
Centisome position: 38.01
GC content: 33.33
Gene sequence:
>915_bases ATGAAAACTAAAATCAATATAATCTTAACCTTATTCATAATCATCATTTTTTTAGAAAGAGCTTATGGACAGCAGACACC TGTTTTTTCAAGTTATAATTACAATGCCGTTTTACTAAATCCTGCCCATGCCGGATATTACCATGATATTGATATTGCTA TGATTACAAATGGTTATTTTAATTCAGTAGAAGGAAGTCCAAAGAATTTTGATCTTTCGGTAAATAAATTAACATGGGGA GAAAAAATAGGTTTGGCTGCAGGAATTTCGCATGACCAGATAGGAGTAACCAATACAACCAGTTTTTTTACCTCTTACTC CTATAAAATCTATTACGATTCAGATTATAAATATGGAAAATGGTGGGCATACGATCCCAGTATAATTTCTTTTGGAGTTA CAGCTGGAGCAATGCTTTACAACGAAAACCTGACTCGTTTGGGAATCGAAAATGATCCTGAATTTCAGGAAAACATCAAC AGTTTTACACCCACTTTTGGAGTTGGGTTTTTGTATAACCGAGATCAGATTTATTTCGGATTATCGTCTCCAAATCTCTT AAGTTCTGCTTTTAATTCAAGTAATAATACCCATTTAAAAAACGTGTATTACAGTTATTTTGGTTATAAATTTTTCACCA ATCGTTTTGAAGAAGTACTGGTCAATCCAAGCGTATTATTTAAATATGTAGAAGGAGCGCCGTTTCAGGCCGATCTGAAT CTTTTAATCAATTATAAAAATAAAGTAGAATTTGGCGGTGGTTACCGAACTTCAAAAACACTGAATTTTCTAGCCGGATT TCACCTTTCAGACAATTTCAGGGTTATCTGTACTTACAATAAATCTATTGACAATGTAGTAATTCCCGACACTTTTGGAT TAGTTTTAAACTACAGAGCGGGCAAAGGGTTTTAG
Upstream 100 bases:
>100_bases CAGTCAACTGCCAGAAGGAACTTATTTCTTCGAAATCCGTGTTAATCAGCCCCATCATTTTAAAAAACTCAAGGGATACC TTGTTTTAAAACGTTAATTC
Downstream 100 bases:
>100_bases TTAATCAACTAAACCATTTTCGACTGCATATTTTACAAGACCTGCCGTATTTTTAGCATTCAGTTTAGATAATAAATTAC GGCGGTGCGTATTTACGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKTKINIILTLFIIIIFLERAYGQQTPVFSSYNYNAVLLNPAHAGYYHDIDIAMITNGYFNSVEGSPKNFDLSVNKLTWG EKIGLAAGISHDQIGVTNTTSFFTSYSYKIYYDSDYKYGKWWAYDPSIISFGVTAGAMLYNENLTRLGIENDPEFQENIN SFTPTFGVGFLYNRDQIYFGLSSPNLLSSAFNSSNNTHLKNVYYSYFGYKFFTNRFEEVLVNPSVLFKYVEGAPFQADLN LLINYKNKVEFGGGYRTSKTLNFLAGFHLSDNFRVICTYNKSIDNVVIPDTFGLVLNYRAGKGF
Sequences:
>Translated_304_residues MKTKINIILTLFIIIIFLERAYGQQTPVFSSYNYNAVLLNPAHAGYYHDIDIAMITNGYFNSVEGSPKNFDLSVNKLTWG EKIGLAAGISHDQIGVTNTTSFFTSYSYKIYYDSDYKYGKWWAYDPSIISFGVTAGAMLYNENLTRLGIENDPEFQENIN SFTPTFGVGFLYNRDQIYFGLSSPNLLSSAFNSSNNTHLKNVYYSYFGYKFFTNRFEEVLVNPSVLFKYVEGAPFQADLN LLINYKNKVEFGGGYRTSKTLNFLAGFHLSDNFRVICTYNKSIDNVVIPDTFGLVLNYRAGKGF >Mature_304_residues MKTKINIILTLFIIIIFLERAYGQQTPVFSSYNYNAVLLNPAHAGYYHDIDIAMITNGYFNSVEGSPKNFDLSVNKLTWG EKIGLAAGISHDQIGVTNTTSFFTSYSYKIYYDSDYKYGKWWAYDPSIISFGVTAGAMLYNENLTRLGIENDPEFQENIN SFTPTFGVGFLYNRDQIYFGLSSPNLLSSAFNSSNNTHLKNVYYSYFGYKFFTNRFEEVLVNPSVLFKYVEGAPFQADLN LLINYKNKVEFGGGYRTSKTLNFLAGFHLSDNFRVICTYNKSIDNVVIPDTFGLVLNYRAGKGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34565; Mature: 34565
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKINIILTLFIIIIFLERAYGQQTPVFSSYNYNAVLLNPAHAGYYHDIDIAMITNGYF CCEEHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCCEEEEEEEEEEECCCC NSVEGSPKNFDLSVNKLTWGEKIGLAAGISHDQIGVTNTTSFFTSYSYKIYYDSDYKYGK CCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCCCCHHHEEEEEEEEEECCCCCCCC WWAYDPSIISFGVTAGAMLYNENLTRLGIENDPEFQENINSFTPTFGVGFLYNRDQIYFG EEEECCCCEEECCHHCEEEECCCCEEECCCCCCCHHHHHHHCCCCCCEEEEEECCEEEEE LSSPNLLSSAFNSSNNTHLKNVYYSYFGYKFFTNRFEEVLVNPSVLFKYVEGAPFQADLN CCCCHHHHHHHCCCCCCEEHEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEECEE LLINYKNKVEFGGGYRTSKTLNFLAGFHLSDNFRVICTYNKSIDNVVIPDTFGLVLNYRA EEEEECCEEEECCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCEECCCCCEEEEEECC GKGF CCCC >Mature Secondary Structure MKTKINIILTLFIIIIFLERAYGQQTPVFSSYNYNAVLLNPAHAGYYHDIDIAMITNGYF CCEEHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCCEEEEEEEEEEECCCC NSVEGSPKNFDLSVNKLTWGEKIGLAAGISHDQIGVTNTTSFFTSYSYKIYYDSDYKYGK CCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCCCCHHHEEEEEEEEEECCCCCCCC WWAYDPSIISFGVTAGAMLYNENLTRLGIENDPEFQENINSFTPTFGVGFLYNRDQIYFG EEEECCCCEEECCHHCEEEECCCCEEECCCCCCCHHHHHHHCCCCCCEEEEEECCEEEEE LSSPNLLSSAFNSSNNTHLKNVYYSYFGYKFFTNRFEEVLVNPSVLFKYVEGAPFQADLN CCCCHHHHHHHCCCCCCEEHEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEECEE LLINYKNKVEFGGGYRTSKTLNFLAGFHLSDNFRVICTYNKSIDNVVIPDTFGLVLNYRA EEEEECCEEEECCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCEECCCCCEEEEEECC GKGF CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA