| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yhbW [H]
Identifier: 146299743
GI number: 146299743
Start: 2302324
End: 2303340
Strand: Direct
Name: yhbW [H]
Synonym: Fjoh_1983
Alternate gene names: 146299743
Gene position: 2302324-2303340 (Clockwise)
Preceding gene: 146299738
Following gene: 146299745
Centisome position: 37.76
GC content: 39.13
Gene sequence:
>1017_bases ATGAAAAACCCAATTTCAGTCTCAATATTAGAGCTTGCGATTATCACCCAAGATAGTAACGCAACAGAAACATTCCAAAA AACAAAAGACATAGCGCAATTAGCCGATAAGTTAGGATACAAAAGGATTTGGCTAGCAGAACACCATAATATGGCACATG TTGCAAGTACAGCAACCGTGGTTTTAATTGGTTATGTAGCAAGTCAAACCGAAAAGATCCGTGTAGGTTCTGGCGGAATC ATGCTTCCAAATCATTCGCCTTTAGTAGTGGCAGAACAATTCGGAACATTAGAAACTCTTTATCCAAACCGAATCGATTT AGGTTTAGGAAGAGCGCCAGGGACAGATCAGCCAACTGCTGAAGCAATTCGTAAAGATTTTTTCGAGCAGGCACAGCGTT TTCCTCAAAACGTAAGCAAACTCCAAGAATATTTTTCAAGTGAAAATGAAACAGGAAAAGTTCGAGCGTTTCCAGCCGAA GGCTTAAAAGTGCCAATTTGGATTTTAGGATCAAGCATGGATAGTGCAGCTTTGGCAGCAGCTTACGGATTGCCTTATGC TTTTGCTGGACACTTTGCTCCAAAACTAATGATTCAGGCATTTGAGTTTTATAGAGAAAACTTCCAACCTTCAGAATATT TAGATAAACCAAAAACAATGGCTTGCGTGAATATCATTGCAGCAGACACAAACGAAGAAGCAGAACTATTGTCTACGAGT TTGTATCAAATGTTCCTGAACTTAATTAGAAACGATCGTAAAGGTTTACAACCACCGGTTCCATCATTGGACGATATCAT GAACGAAGCAGAACGTTTTCATGTCAATCAGATGACAGCGGGGACCTTCACAGGAAACAAAGAACAATTAAAAACGGATT TGAAAAAGTTCATCGACTACGCCAGAATAGACGAACTAATGGTAACAAGTCCAATCTTCGATCATCAGGCAAAATTAAAA AGCATCCAGATCACAAAAGAAGCAATCGACAGCCTAAACGAAAGTATACATATATAA
Upstream 100 bases:
>100_bases GATATACTGAATAACTTAGTAATATTATAATTCTATTAACATTAGAAAACAAAAGGCATTCGCATAAATGAGTTAATTTT GTATTTTACCCTTAATTTAT
Downstream 100 bases:
>100_bases GTATACTATATATAAGAGTAGATTTCATTCTCATAACCCGCCAGTTTTTGAAAACCTGTCGGGTTTGTTTTTTTTGTGTA TACATATATAAGTATGGTAT
Product: luciferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKNPISVSILELAIITQDSNATETFQKTKDIAQLADKLGYKRIWLAEHHNMAHVASTATVVLIGYVASQTEKIRVGSGGI MLPNHSPLVVAEQFGTLETLYPNRIDLGLGRAPGTDQPTAEAIRKDFFEQAQRFPQNVSKLQEYFSSENETGKVRAFPAE GLKVPIWILGSSMDSAALAAAYGLPYAFAGHFAPKLMIQAFEFYRENFQPSEYLDKPKTMACVNIIAADTNEEAELLSTS LYQMFLNLIRNDRKGLQPPVPSLDDIMNEAERFHVNQMTAGTFTGNKEQLKTDLKKFIDYARIDELMVTSPIFDHQAKLK SIQITKEAIDSLNESIHI
Sequences:
>Translated_338_residues MKNPISVSILELAIITQDSNATETFQKTKDIAQLADKLGYKRIWLAEHHNMAHVASTATVVLIGYVASQTEKIRVGSGGI MLPNHSPLVVAEQFGTLETLYPNRIDLGLGRAPGTDQPTAEAIRKDFFEQAQRFPQNVSKLQEYFSSENETGKVRAFPAE GLKVPIWILGSSMDSAALAAAYGLPYAFAGHFAPKLMIQAFEFYRENFQPSEYLDKPKTMACVNIIAADTNEEAELLSTS LYQMFLNLIRNDRKGLQPPVPSLDDIMNEAERFHVNQMTAGTFTGNKEQLKTDLKKFIDYARIDELMVTSPIFDHQAKLK SIQITKEAIDSLNESIHI >Mature_338_residues MKNPISVSILELAIITQDSNATETFQKTKDIAQLADKLGYKRIWLAEHHNMAHVASTATVVLIGYVASQTEKIRVGSGGI MLPNHSPLVVAEQFGTLETLYPNRIDLGLGRAPGTDQPTAEAIRKDFFEQAQRFPQNVSKLQEYFSSENETGKVRAFPAE GLKVPIWILGSSMDSAALAAAYGLPYAFAGHFAPKLMIQAFEFYRENFQPSEYLDKPKTMACVNIIAADTNEEAELLSTS LYQMFLNLIRNDRKGLQPPVPSLDDIMNEAERFHVNQMTAGTFTGNKEQLKTDLKKFIDYARIDELMVTSPIFDHQAKLK SIQITKEAIDSLNESIHI
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=328, Percent_Identity=48.780487804878, Blast_Score=341, Evalue=3e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 37716; Mature: 37716
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNPISVSILELAIITQDSNATETFQKTKDIAQLADKLGYKRIWLAEHHNMAHVASTATV CCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH VLIGYVASQTEKIRVGSGGIMLPNHSPLVVAEQFGTLETLYPNRIDLGLGRAPGTDQPTA HHHHHHHCCCCEEEECCCCEECCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCHHH EAIRKDFFEQAQRFPQNVSKLQEYFSSENETGKVRAFPAEGLKVPIWILGSSMDSAALAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHH AYGLPYAFAGHFAPKLMIQAFEFYRENFQPSEYLDKPKTMACVNIIAADTNEEAELLSTS HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHEEECCCCCHHHHHHHH LYQMFLNLIRNDRKGLQPPVPSLDDIMNEAERFHVNQMTAGTFTGNKEQLKTDLKKFIDY HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHH ARIDELMVTSPIFDHQAKLKSIQITKEAIDSLNESIHI HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNPISVSILELAIITQDSNATETFQKTKDIAQLADKLGYKRIWLAEHHNMAHVASTATV CCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH VLIGYVASQTEKIRVGSGGIMLPNHSPLVVAEQFGTLETLYPNRIDLGLGRAPGTDQPTA HHHHHHHCCCCEEEECCCCEECCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCHHH EAIRKDFFEQAQRFPQNVSKLQEYFSSENETGKVRAFPAEGLKVPIWILGSSMDSAALAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHH AYGLPYAFAGHFAPKLMIQAFEFYRENFQPSEYLDKPKTMACVNIIAADTNEEAELLSTS HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHEEECCCCCHHHHHHHH LYQMFLNLIRNDRKGLQPPVPSLDDIMNEAERFHVNQMTAGTFTGNKEQLKTDLKKFIDY HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHH ARIDELMVTSPIFDHQAKLKSIQITKEAIDSLNESIHI HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]