| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299688
Identifier: 146299688
GI number: 146299688
Start: 2231352
End: 2232623
Strand: Direct
Name: 146299688
Synonym: Fjoh_1928
Alternate gene names: NA
Gene position: 2231352-2232623 (Clockwise)
Preceding gene: 146299687
Following gene: 146299689
Centisome position: 36.6
GC content: 31.53
Gene sequence:
>1272_bases ATGAAAGAAGATTTTCTTCATTATTTATGGAAATTCAGGAAGTTTGATAACCTGAATTTAAAAACAGCACAAAATGAATT AATCACAATTATTAAGCCGGGTGATTATTTAGAACTTTCTGGACCAGATTTTTTTAACGCACACATAAAAATTGGAGATC AAAAGTGGGCAGGAAATGTAGAAATACATTTAAAATCTTCAGATTGGTATCTGCACAATCACGAAAAAGATCCTGCTTAT GAAAATGTTATTCTCCATGTGGTTTGGGAGAATGATACAGCAATTTTTAGGGAAAACAACACAGAAATCCCGGTTTTGGT TCTTAAGGATTATGTTTCTCAGGAAATAATAGAAAATTATTATGCACTTGTTTCGCCAAAAACATGGATTTCCTGTGAAC GACAATTAAACGAGATTGACGAATTTATATTTAAAAACTGGCAGGAGAGATTGTTTTTTGAACGGTTAGAACGCAAGTCG GCATTTGTTTATGAATTGCTTGAAGAAACAAACCAGGATTGGGAAGCCGTTTTGTTTTGTATGCTGGCAAAAAACTTTGG TTTAAATACAAACGGAAATTCATTTTTACAGATTGCTAAATCAATACCTTTTTCGATTATTAGAAAGGAAAGTTTTGAAG CAGGCAGTCTTGAAGCTTTATTTTTGGGAACTGCAGGTTTGTTAGACGGAGAAAAGGAGGACGTTTATTTTAAAGATCTG AAGTTTAAATATTTTTTTCTTCTTCATAAATACCAACTAGTAAAAACACATGTTGATCCGGTTTTGTTTTTTAAGCTCCG CCCGGATAATTTTCCAACAATAAGACTTTCTCAGCTTGCGGAGATATATCATAAACATCAAAATTTGTTTTCTAAAATAA TAGCTTTAAAATCTGCGAAAGAAGTTTATAATCTGCTGAATGTTTCTTCAAGCGAATATTGGAAAAATCATTATCAGTTC GATAAAGAAAGTTCAAAGAAAGCGAAGCCATTATCAAAATCATTTCTGGACTTGATAATTATAAATACTATAATACCAAT TCAGTTTGCTTACTCAAATACGATAGGGGAGTCTGTAACAGAAGATTTAATTGATTTTATGGTCGAAGTTGATTCAGAAA AAAATGCCGTTATAGATAAGTTTAATTCATTTGGCATAAAATCAGCAAACGCATTTGAGAGTCAGTCTCTGTTAGAACTT AAAAATGAATACTGTAATAATAAAGCCTGTTTAAAATGCGCTGTTGGAATTGAATTGCTTAAAAACAATTAG
Upstream 100 bases:
>100_bases GATTGAATCGGGTTTGTGGATTTTTTTATTCCTTAAAATAAATTTGTAAGAATAATATTAAATTTATTATTTTTAAATTG TAATTACAATAGTAAAAAAA
Downstream 100 bases:
>100_bases ATAATTTGTACTTTTGTAATCAGGAATATAAAATCTAAAGCCTAAAATAAAGATGTCAGCAATTTTAAAACTTAAATTCT TTTTCGAAAAATATGGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MKEDFLHYLWKFRKFDNLNLKTAQNELITIIKPGDYLELSGPDFFNAHIKIGDQKWAGNVEIHLKSSDWYLHNHEKDPAY ENVILHVVWENDTAIFRENNTEIPVLVLKDYVSQEIIENYYALVSPKTWISCERQLNEIDEFIFKNWQERLFFERLERKS AFVYELLEETNQDWEAVLFCMLAKNFGLNTNGNSFLQIAKSIPFSIIRKESFEAGSLEALFLGTAGLLDGEKEDVYFKDL KFKYFFLLHKYQLVKTHVDPVLFFKLRPDNFPTIRLSQLAEIYHKHQNLFSKIIALKSAKEVYNLLNVSSSEYWKNHYQF DKESSKKAKPLSKSFLDLIIINTIIPIQFAYSNTIGESVTEDLIDFMVEVDSEKNAVIDKFNSFGIKSANAFESQSLLEL KNEYCNNKACLKCAVGIELLKNN
Sequences:
>Translated_423_residues MKEDFLHYLWKFRKFDNLNLKTAQNELITIIKPGDYLELSGPDFFNAHIKIGDQKWAGNVEIHLKSSDWYLHNHEKDPAY ENVILHVVWENDTAIFRENNTEIPVLVLKDYVSQEIIENYYALVSPKTWISCERQLNEIDEFIFKNWQERLFFERLERKS AFVYELLEETNQDWEAVLFCMLAKNFGLNTNGNSFLQIAKSIPFSIIRKESFEAGSLEALFLGTAGLLDGEKEDVYFKDL KFKYFFLLHKYQLVKTHVDPVLFFKLRPDNFPTIRLSQLAEIYHKHQNLFSKIIALKSAKEVYNLLNVSSSEYWKNHYQF DKESSKKAKPLSKSFLDLIIINTIIPIQFAYSNTIGESVTEDLIDFMVEVDSEKNAVIDKFNSFGIKSANAFESQSLLEL KNEYCNNKACLKCAVGIELLKNN >Mature_423_residues MKEDFLHYLWKFRKFDNLNLKTAQNELITIIKPGDYLELSGPDFFNAHIKIGDQKWAGNVEIHLKSSDWYLHNHEKDPAY ENVILHVVWENDTAIFRENNTEIPVLVLKDYVSQEIIENYYALVSPKTWISCERQLNEIDEFIFKNWQERLFFERLERKS AFVYELLEETNQDWEAVLFCMLAKNFGLNTNGNSFLQIAKSIPFSIIRKESFEAGSLEALFLGTAGLLDGEKEDVYFKDL KFKYFFLLHKYQLVKTHVDPVLFFKLRPDNFPTIRLSQLAEIYHKHQNLFSKIIALKSAKEVYNLLNVSSSEYWKNHYQF DKESSKKAKPLSKSFLDLIIINTIIPIQFAYSNTIGESVTEDLIDFMVEVDSEKNAVIDKFNSFGIKSANAFESQSLLEL KNEYCNNKACLKCAVGIELLKNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49457; Mature: 49457
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEDFLHYLWKFRKFDNLNLKTAQNELITIIKPGDYLELSGPDFFNAHIKIGDQKWAGNV CCHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCE EIHLKSSDWYLHNHEKDPAYENVILHVVWENDTAIFRENNTEIPVLVLKDYVSQEIIENY EEEEECCCEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCCEEHHHHHHHHHHHHHH YALVSPKTWISCERQLNEIDEFIFKNWQERLFFERLERKSAFVYELLEETNQDWEAVLFC HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MLAKNFGLNTNGNSFLQIAKSIPFSIIRKESFEAGSLEALFLGTAGLLDGEKEDVYFKDL HHHHHCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEHH KFKYFFLLHKYQLVKTHVDPVLFFKLRPDNFPTIRLSQLAEIYHKHQNLFSKIIALKSAK HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH EVYNLLNVSSSEYWKNHYQFDKESSKKAKPLSKSFLDLIIINTIIPIQFAYSNTIGESVT HHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCHHHHHHH EDLIDFMVEVDSEKNAVIDKFNSFGIKSANAFESQSLLELKNEYCNNKACLKCAVGIELL HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHEEHHHHHHEE KNN CCC >Mature Secondary Structure MKEDFLHYLWKFRKFDNLNLKTAQNELITIIKPGDYLELSGPDFFNAHIKIGDQKWAGNV CCHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCE EIHLKSSDWYLHNHEKDPAYENVILHVVWENDTAIFRENNTEIPVLVLKDYVSQEIIENY EEEEECCCEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCCEEHHHHHHHHHHHHHH YALVSPKTWISCERQLNEIDEFIFKNWQERLFFERLERKSAFVYELLEETNQDWEAVLFC HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MLAKNFGLNTNGNSFLQIAKSIPFSIIRKESFEAGSLEALFLGTAGLLDGEKEDVYFKDL HHHHHCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEHH KFKYFFLLHKYQLVKTHVDPVLFFKLRPDNFPTIRLSQLAEIYHKHQNLFSKIIALKSAK HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH EVYNLLNVSSSEYWKNHYQFDKESSKKAKPLSKSFLDLIIINTIIPIQFAYSNTIGESVT HHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCHHHHHHH EDLIDFMVEVDSEKNAVIDKFNSFGIKSANAFESQSLLELKNEYCNNKACLKCAVGIELL HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHEEHHHHHHEE KNN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA