| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299681
Identifier: 146299681
GI number: 146299681
Start: 2220501
End: 2221253
Strand: Direct
Name: 146299681
Synonym: Fjoh_1921
Alternate gene names: NA
Gene position: 2220501-2221253 (Clockwise)
Preceding gene: 146299680
Following gene: 146299682
Centisome position: 36.42
GC content: 33.6
Gene sequence:
>753_bases ATGAAATTATACAAATTATTTGCTTTTTGTTTTTTATTAGCAACTCTAACGAGCTGCACTTTTACTGAAAATATTACAAT TAACGATAACGGAACCGGAAAATTCTCTGTAGATATGGACGGTTCGGCTTTAATGGAAATGGCAGGCGACCAGATAGGAA ATCAAATGGGAGCTGATGCAAAAAAAGAGATCGATTCTAGTTTTACTTTCAAACAATTATTTGACGAGAAAAAAGACAGT ATTGCAAAACTATCACCCGAGGCTCAAAAAGAAATTAAAAAACTCGAAAATTTTGTAGTTAATACTAAAATGAGTTCTGA GAAAAAGCAATTTTTAATGACGTTGTCGACTGACTTTAAAAATGTAAACGAAATGCAGGATATTCTGCAAACACTCAGCA CACTTCAAAAACTAGAAGGCGGTGCAGCGGCATCTCCTTTTGGAAGTGGTTTTGGAGACAATAACAGTAAATTAAGTTAT AGTTACGACGGGAAAAAATTCACCAGAAAAGCAGTTATTGATGCGCAAAAAAAGGCACAAAAACCGAAAGATTCTGCCGG AGATATGTCTAAAATGATGTTTGCTTCTTCAACTTATGTGGTAAAATATAATTTCCCAAAAAAGATAAAAAAAGTATCCA ATCCAAACGCTTTATTCAGCGACGACCGAAAATCAATTACAATTCAATACCCTTTCACGGATTATATGGAGAATCCTGAC AAACTTAACTTTGATGTTGAGTTTGAAAAATAA
Upstream 100 bases:
>100_bases TGGAAAATCCATGAGCTATTTTTTCGCCTAAACGATTAAACAAATCAACAATTAAACAATTCAAAATAGACTTCGTATCT TTGATAAAAATTGTACTACG
Downstream 100 bases:
>100_bases TTAAAATGAATAAAAAAATTCAACTTCAGGATCTGGGAAACAGAGACTATAAATCGACTTGGGAATATCAGGAAGAACTT TTTCAGGATATTGTCGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKLYKLFAFCFLLATLTSCTFTENITINDNGTGKFSVDMDGSALMEMAGDQIGNQMGADAKKEIDSSFTFKQLFDEKKDS IAKLSPEAQKEIKKLENFVVNTKMSSEKKQFLMTLSTDFKNVNEMQDILQTLSTLQKLEGGAAASPFGSGFGDNNSKLSY SYDGKKFTRKAVIDAQKKAQKPKDSAGDMSKMMFASSTYVVKYNFPKKIKKVSNPNALFSDDRKSITIQYPFTDYMENPD KLNFDVEFEK
Sequences:
>Translated_250_residues MKLYKLFAFCFLLATLTSCTFTENITINDNGTGKFSVDMDGSALMEMAGDQIGNQMGADAKKEIDSSFTFKQLFDEKKDS IAKLSPEAQKEIKKLENFVVNTKMSSEKKQFLMTLSTDFKNVNEMQDILQTLSTLQKLEGGAAASPFGSGFGDNNSKLSY SYDGKKFTRKAVIDAQKKAQKPKDSAGDMSKMMFASSTYVVKYNFPKKIKKVSNPNALFSDDRKSITIQYPFTDYMENPD KLNFDVEFEK >Mature_250_residues MKLYKLFAFCFLLATLTSCTFTENITINDNGTGKFSVDMDGSALMEMAGDQIGNQMGADAKKEIDSSFTFKQLFDEKKDS IAKLSPEAQKEIKKLENFVVNTKMSSEKKQFLMTLSTDFKNVNEMQDILQTLSTLQKLEGGAAASPFGSGFGDNNSKLSY SYDGKKFTRKAVIDAQKKAQKPKDSAGDMSKMMFASSTYVVKYNFPKKIKKVSNPNALFSDDRKSITIQYPFTDYMENPD KLNFDVEFEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28080; Mature: 28080
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYKLFAFCFLLATLTSCTFTENITINDNGTGKFSVDMDGSALMEMAGDQIGNQMGADA CHHHHHHHHHHHHHHHHHCCEECEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCH KKEIDSSFTFKQLFDEKKDSIAKLSPEAQKEIKKLENFVVNTKMSSEKKQFLMTLSTDFK HHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC NVNEMQDILQTLSTLQKLEGGAAASPFGSGFGDNNSKLSYSYDGKKFTRKAVIDAQKKAQ CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHC KPKDSAGDMSKMMFASSTYVVKYNFPKKIKKVSNPNALFSDDRKSITIQYPFTDYMENPD CCCCCCCHHHHHHHHCCEEEEEECCHHHHHHCCCCCCEECCCCCEEEEECCCHHHHCCCC KLNFDVEFEK CEEEEEEECC >Mature Secondary Structure MKLYKLFAFCFLLATLTSCTFTENITINDNGTGKFSVDMDGSALMEMAGDQIGNQMGADA CHHHHHHHHHHHHHHHHHCCEECEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCH KKEIDSSFTFKQLFDEKKDSIAKLSPEAQKEIKKLENFVVNTKMSSEKKQFLMTLSTDFK HHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC NVNEMQDILQTLSTLQKLEGGAAASPFGSGFGDNNSKLSYSYDGKKFTRKAVIDAQKKAQ CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHC KPKDSAGDMSKMMFASSTYVVKYNFPKKIKKVSNPNALFSDDRKSITIQYPFTDYMENPD CCCCCCCHHHHHHHHCCEEEEEECCHHHHHHCCCCCCEECCCCCEEEEECCCHHHHCCCC KLNFDVEFEK CEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA