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The map label for this gene is dcyD [C]

Identifier: 146299672

GI number: 146299672

Start: 2211221

End: 2212129

Strand: Direct

Name: dcyD [C]

Synonym: Fjoh_1912

Alternate gene names: 146299672

Gene position: 2211221-2212129 (Clockwise)

Preceding gene: 146299671

Following gene: 146299673

Centisome position: 36.27

GC content: 33.44

Gene sequence:

>909_bases
ATGAATCCAGTTTTCAATCAAAATATAAATATTCAGTTTCCAAATCATATTTCGCTGACTATAAAGCGTGAAGATTTAAT
TCATCCGTTTGTTTCGGGAAATAAATTCAGAAAACTAAAATACAATTTACTTCAGGCAAAAGCCGAAAACAAAGATACTT
TATTGACTTTTGGAGGAGCTTTTTCGAACCATATTGCGGCTGTGGCTTATGCAGGAAAAGAACAGGGGTTTAAAACGATT
GGAATTATTCGAGGAGATGAACTTTTGGATAAAATACAGGAAAACCCAACCTTGAAATTTGCTCAGGAAAACGGAATGCA
GTTTGAGTTTGTTTCGCGAGAGGAGTACCGTTTAAAAAATGAAAAGTCATTTATAGAAAAGCTGAAAGAGAAGTTTGGTG
ATTTTTATTTGGTTCCGGAAGGAGGAACAAATGAACTTGCTGTAAAAGGCTGCGAGGAGATTTTGACAGAAGAAGATTCG
GTTTTTAATTACGTTTGCTGTGCGGTTGGAACAGGCGGCACAATTTCGGGATTAATCAATAATGCATTGCCAAATCAGAA
AATTTTGGGCTTTCCAGCGTTAAAAGGTGACTTTTTAAACGATGAAATTCGTATTTTTGCAAAAAAAGATAACTGGAATT
TAATTTCTGACTATCATTGTGGAGGTTATGGCAAGATAAATTTAGAATTAATTGAATTTATTAATTCTTTTTTTGAAGAA
ACAAAAGTGCCCTTAGATCCAATTTATACAGGAAAGATGGTTTTTGGCGTTATAGATTTAATAAACAAAAATTATTTTCC
TGCGCATTCAAAAATTTTACTCATTCACACAGGCGGATTGCAGGGAATTGACGGAATGAATATAAAGTTGAAGCAGAAGA
AATTACCAATACTCAAAACCAATGATTAA

Upstream 100 bases:

>100_bases
ACATTACATGAAGAGCTATAAGCAATAGGCTTTAAGCAATAAGCTTGATGCTAAGACAAGAATTATAACTTTTGACTTTT
GACTTTCCAACTTAAAAAAA

Downstream 100 bases:

>100_bases
AAAAATTGTATTACTTCTCGTAATATTAGCTTTAGCAAGCTGCTCTTCTAGTAAGCCTGCCATCGCGACGACTAAAAAAG
CGGCAGATGTTCAAACTAGG

Product: 1-aminocyclopropane-1-carboxylate deaminase-like protein

Products: NA

Alternate protein names: ACC deaminase [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MNPVFNQNINIQFPNHISLTIKREDLIHPFVSGNKFRKLKYNLLQAKAENKDTLLTFGGAFSNHIAAVAYAGKEQGFKTI
GIIRGDELLDKIQENPTLKFAQENGMQFEFVSREEYRLKNEKSFIEKLKEKFGDFYLVPEGGTNELAVKGCEEILTEEDS
VFNYVCCAVGTGGTISGLINNALPNQKILGFPALKGDFLNDEIRIFAKKDNWNLISDYHCGGYGKINLELIEFINSFFEE
TKVPLDPIYTGKMVFGVIDLINKNYFPAHSKILLIHTGGLQGIDGMNIKLKQKKLPILKTND

Sequences:

>Translated_302_residues
MNPVFNQNINIQFPNHISLTIKREDLIHPFVSGNKFRKLKYNLLQAKAENKDTLLTFGGAFSNHIAAVAYAGKEQGFKTI
GIIRGDELLDKIQENPTLKFAQENGMQFEFVSREEYRLKNEKSFIEKLKEKFGDFYLVPEGGTNELAVKGCEEILTEEDS
VFNYVCCAVGTGGTISGLINNALPNQKILGFPALKGDFLNDEIRIFAKKDNWNLISDYHCGGYGKINLELIEFINSFFEE
TKVPLDPIYTGKMVFGVIDLINKNYFPAHSKILLIHTGGLQGIDGMNIKLKQKKLPILKTND
>Mature_302_residues
MNPVFNQNINIQFPNHISLTIKREDLIHPFVSGNKFRKLKYNLLQAKAENKDTLLTFGGAFSNHIAAVAYAGKEQGFKTI
GIIRGDELLDKIQENPTLKFAQENGMQFEFVSREEYRLKNEKSFIEKLKEKFGDFYLVPEGGTNELAVKGCEEILTEEDS
VFNYVCCAVGTGGTISGLINNALPNQKILGFPALKGDFLNDEIRIFAKKDNWNLISDYHCGGYGKINLELIEFINSFFEE
TKVPLDPIYTGKMVFGVIDLINKNYFPAHSKILLIHTGGLQGIDGMNIKLKQKKLPILKTND

Specific function: Catalyzes The Alpha,Beta-Elimination Reaction Of D-Cysteine And Of Several D-Cysteine Derivatives. It Could Be A Defense Mechanism Against D-Cysteine. Can Also Catalyze The Degradation Of 3-Chloro-D-Alanine. [C]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=296, Percent_Identity=28.0405405405405, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =3.5.99.7 [H]

Molecular weight: Translated: 34051; Mature: 34051

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVFNQNINIQFPNHISLTIKREDLIHPFVSGNKFRKLKYNLLQAKAENKDTLLTFGGA
CCCCCCCCEEEEECCEEEEEEEHHHHCCHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCC
FSNHIAAVAYAGKEQGFKTIGIIRGDELLDKIQENPTLKFAQENGMQFEFVSREEYRLKN
HHCCEEEEEECCCCCCCEEEEEEECHHHHHHHHCCCCEEEECCCCCEEEEECCHHHHHHH
EKSFIEKLKEKFGDFYLVPEGGTNELAVKGCEEILTEEDSVFNYVCCAVGTGGTISGLIN
HHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHH
NALPNQKILGFPALKGDFLNDEIRIFAKKDNWNLISDYHCGGYGKINLELIEFINSFFEE
CCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCEEHHHHHHHHHHHHHH
TKVPLDPIYTGKMVFGVIDLINKNYFPAHSKILLIHTGGLQGIDGMNIKLKQKKLPILKT
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEEC
ND
CC
>Mature Secondary Structure
MNPVFNQNINIQFPNHISLTIKREDLIHPFVSGNKFRKLKYNLLQAKAENKDTLLTFGGA
CCCCCCCCEEEEECCEEEEEEEHHHHCCHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCC
FSNHIAAVAYAGKEQGFKTIGIIRGDELLDKIQENPTLKFAQENGMQFEFVSREEYRLKN
HHCCEEEEEECCCCCCCEEEEEEECHHHHHHHHCCCCEEEECCCCCEEEEECCHHHHHHH
EKSFIEKLKEKFGDFYLVPEGGTNELAVKGCEEILTEEDSVFNYVCCAVGTGGTISGLIN
HHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHH
NALPNQKILGFPALKGDFLNDEIRIFAKKDNWNLISDYHCGGYGKINLELIEFINSFFEE
CCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCEEHHHHHHHHHHHHHH
TKVPLDPIYTGKMVFGVIDLINKNYFPAHSKILLIHTGGLQGIDGMNIKLKQKKLPILKT
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEEC
ND
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]