| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299640
Identifier: 146299640
GI number: 146299640
Start: 2166234
End: 2168996
Strand: Direct
Name: 146299640
Synonym: Fjoh_1880
Alternate gene names: NA
Gene position: 2166234-2168996 (Clockwise)
Preceding gene: 146299639
Following gene: 146299654
Centisome position: 35.53
GC content: 33.04
Gene sequence:
>2763_bases ATGACCAAGATTTATTCATTTTTATCGTTTTTATTCCTTTTTGTTTTGACTGCCAATGCACAAAACGACGTTACACTTAG AGGAACCGTTTTAGACGTTAACACACAATTGCCTCTGGAAATGGCAACTGTTTATTTTACTACTATAAAAGATTCTACCG TTATCGAATACGCCACTACAGATAAAAATGGTGCTTTTAGAATGGATATCAAAAAATATGAAAAGCCTGTTTTTTTAAAG GTGAGTTATATGGGATATCAAACCTATTACGAAGAATACAAGGGGCTTACTGAAAACAAAGATTTCGGAAAACTTTACAT GATAGAAAATGTAAATACGCTGAATGACGTTGTTATAAAAACCGAAGCAGCGCCAATTACTATCAAAAAAGATACGTTAG AGTTTAACGCGGCTTCTTATAAAGTCCGTCCGGATTCTAATGTTGAAACTTTATTAAAACAACTGCCGGGATTTGATGTC GATAATGACGGAAAAATTACGGTGAACGGACGAGAAGTGAATCAGGTTTTGGTAAACGGAAAAACGTTTTTTGATAAAGA CGGAGCGATTGCCATTAAAAATCTGCCGGCCGATATTATTAAAAAAATTCAGGTTTCTGATTTTAAAACCAAAAAAGAAG AGCTTTCTAAACAAGAATCAACTTCAGATTTTTCGAGTATTAATATTACTATTGATGAAAAGAAAAACAAAGGATATTTT GGAAAAATAATGGGCGGTTATGGTACCGATGATCGTTATGAAGCCAATGTGAATCTGAATTATTTTAATAACAAGCAGAA AATAAGTTTACTGGCTTCGTCAAACAATATCAATTCGACCGGATTTTCAATGGACGATGTTTTTGATAATATGGGAGGCG GAAGAAATAGCAGCGGAAGAGGAGGAAGTACAAGCTCTGGTTCTAGTGGAAAAGGAATTACGCAGTCAAATTTAGTGGGA GTTAATTACTCTGATGACTGGACTGAAAAACTGCTGGCTATGGGAAGTTACAATTTCTCAAATACCATTAATAACAACGA CAGTAAATCAAACCAGCTTAGTTTTTTACCAACCGGAAATATTATAACCGAGGCCGAAGCTAAAACAAGAAATGAAAGTA CAGGAAATAACGTCAATTTTGAATTAGAGTATAAAATCAGTCCAAGTATTCGATTGGTTGTAGCACCAAAATTGAATCAA TCGAGAACCAACAGTAATTCGACTTCGTCTAGCTTTTCTGAAGATGAAGATGGAAACGAGTTGAACAGAAGTACTTCAAA ATCATATTCTGAAGGTGATAATACCAATTTTGGAAACACAATCAATTTTAATAAATCTTTCGAAAAGAAATCTCGAAATT TTAGTTTTGTTTTTACCAATAACAACACTAACAATACGGCAGATGGTTTAAATCTTTCGGAAACGATTTTCTATCAGGAC AATCAGCCGAATGATGAAAGAAATCAAACTACAAAAAAGAAAAACACCAGCGATTCTTATTCGGCAGATATTGAATATAC TGAGCCAATAACAGATTCGCTTCGAGTACGATTTGGATCTAATTTTGATTGGAAAAGTACTTCAAACGACGAAAGAACTT TTAATTTTGATCCAGATACACAAGAATATACCGATCTTAATTTAGCATTGAGTAATTATACAAGTTCAATTCAAAACTCG GTTACGCCAAAAGTTGGAGTTACGCTTCAAAAAAATAAATTTACGCTTAACCTTGACAGCCGAACATCGATTGTAAATTT TGATAATCACTCACTGTATTTGAATAATGCGACAGATTTAAGTAAAAAATATGCTTTACCATTTGCAACAGCGGTACTGC GATATAAATTTGACCGTTCTAAAAATCTATCATTCAAATACGATTATTCTAATACTCTGCCATCGGCTGCACAATTAATG CCGGTTGTAAATCTTAATAATCCATTGAATACCATTATCGGAAATCCTGATCTGCATCCTGTAGAAAAAAACAGTATTAA TTTTAATTACAGAAATTACGATTTTCGTTCTCGTTCTGGGTATAGCTTGTACATAAAAGGAGATTATTATGATAATGATA TTGTTTCGACTTCAATTTATGATGAAAGCGGAAAAAGAACGACAACGTATGTAAATATTTCGGGTGTTTATAATGCTTCG ATTGGAGCAAACTGGAACCAGTCTATAAAATCTGGCGCGCATACACTGCGTTACGGATTAGGATTAAATGCTGGTTATAC TTTTGATAAAGGTTTTACAAATGCTGTTTTGTATAATGCAAAATCGACTTCTATTACGCCAAAAGTATATTTATCATACG ATTATGGAGATGTTCTGACGATTGCACCATCTTATAATTTATCCTACAACCAGTCGAAATACGAGAATTATTCGAGAGAT GCTACTTCAAATGTTGTACACAGAATCAATTTACAAACTACAACTTACTGGCCAGAAAATTTAATCTTCGGAAATGATTT TGGTTATACTTATAATTCAAATATTTCAGGCGACTTTAAAAAAGATTTTTATTTATGGAATACGAGTTTGTCGTATGGAT TTTTAAATAAAACACTTTATGCTAAAGTAAAAGTATATGATGTTTTAAATCAAAATTTAAGTGCAACAAGAACCATTTCG GCAACTTCAATCCGCGATGAAGAAAATACGGTTTTAAGACGTTATGTAATGTTTTCTCTGGCTTATAAAATAGGAAACTT TACAGGGTCTGAAAAAGGAGGAAAGAGAAGACCGAGAGATTAA
Upstream 100 bases:
>100_bases TGGCACGTTATTTGAATAAATGTAAAAACTACAATTAAAAAATAAAATTTTAAACCTTTTGTTTTTTCTGTAGTCTAACT AATCTAACTAACCCAATTTT
Downstream 100 bases:
>100_bases GTTTTCTTTTAGGTTCAAAGGGACAAAGGTTCAAAGGGACAAAGGTTCAAAGGTTCAAAGGGACAAAGGGACAAAGGTTC AAAGGGACAAAGGAATAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 920; Mature: 919
Protein sequence:
>920_residues MTKIYSFLSFLFLFVLTANAQNDVTLRGTVLDVNTQLPLEMATVYFTTIKDSTVIEYATTDKNGAFRMDIKKYEKPVFLK VSYMGYQTYYEEYKGLTENKDFGKLYMIENVNTLNDVVIKTEAAPITIKKDTLEFNAASYKVRPDSNVETLLKQLPGFDV DNDGKITVNGREVNQVLVNGKTFFDKDGAIAIKNLPADIIKKIQVSDFKTKKEELSKQESTSDFSSINITIDEKKNKGYF GKIMGGYGTDDRYEANVNLNYFNNKQKISLLASSNNINSTGFSMDDVFDNMGGGRNSSGRGGSTSSGSSGKGITQSNLVG VNYSDDWTEKLLAMGSYNFSNTINNNDSKSNQLSFLPTGNIITEAEAKTRNESTGNNVNFELEYKISPSIRLVVAPKLNQ SRTNSNSTSSSFSEDEDGNELNRSTSKSYSEGDNTNFGNTINFNKSFEKKSRNFSFVFTNNNTNNTADGLNLSETIFYQD NQPNDERNQTTKKKNTSDSYSADIEYTEPITDSLRVRFGSNFDWKSTSNDERTFNFDPDTQEYTDLNLALSNYTSSIQNS VTPKVGVTLQKNKFTLNLDSRTSIVNFDNHSLYLNNATDLSKKYALPFATAVLRYKFDRSKNLSFKYDYSNTLPSAAQLM PVVNLNNPLNTIIGNPDLHPVEKNSINFNYRNYDFRSRSGYSLYIKGDYYDNDIVSTSIYDESGKRTTTYVNISGVYNAS IGANWNQSIKSGAHTLRYGLGLNAGYTFDKGFTNAVLYNAKSTSITPKVYLSYDYGDVLTIAPSYNLSYNQSKYENYSRD ATSNVVHRINLQTTTYWPENLIFGNDFGYTYNSNISGDFKKDFYLWNTSLSYGFLNKTLYAKVKVYDVLNQNLSATRTIS ATSIRDEENTVLRRYVMFSLAYKIGNFTGSEKGGKRRPRD
Sequences:
>Translated_920_residues MTKIYSFLSFLFLFVLTANAQNDVTLRGTVLDVNTQLPLEMATVYFTTIKDSTVIEYATTDKNGAFRMDIKKYEKPVFLK VSYMGYQTYYEEYKGLTENKDFGKLYMIENVNTLNDVVIKTEAAPITIKKDTLEFNAASYKVRPDSNVETLLKQLPGFDV DNDGKITVNGREVNQVLVNGKTFFDKDGAIAIKNLPADIIKKIQVSDFKTKKEELSKQESTSDFSSINITIDEKKNKGYF GKIMGGYGTDDRYEANVNLNYFNNKQKISLLASSNNINSTGFSMDDVFDNMGGGRNSSGRGGSTSSGSSGKGITQSNLVG VNYSDDWTEKLLAMGSYNFSNTINNNDSKSNQLSFLPTGNIITEAEAKTRNESTGNNVNFELEYKISPSIRLVVAPKLNQ SRTNSNSTSSSFSEDEDGNELNRSTSKSYSEGDNTNFGNTINFNKSFEKKSRNFSFVFTNNNTNNTADGLNLSETIFYQD NQPNDERNQTTKKKNTSDSYSADIEYTEPITDSLRVRFGSNFDWKSTSNDERTFNFDPDTQEYTDLNLALSNYTSSIQNS VTPKVGVTLQKNKFTLNLDSRTSIVNFDNHSLYLNNATDLSKKYALPFATAVLRYKFDRSKNLSFKYDYSNTLPSAAQLM PVVNLNNPLNTIIGNPDLHPVEKNSINFNYRNYDFRSRSGYSLYIKGDYYDNDIVSTSIYDESGKRTTTYVNISGVYNAS IGANWNQSIKSGAHTLRYGLGLNAGYTFDKGFTNAVLYNAKSTSITPKVYLSYDYGDVLTIAPSYNLSYNQSKYENYSRD ATSNVVHRINLQTTTYWPENLIFGNDFGYTYNSNISGDFKKDFYLWNTSLSYGFLNKTLYAKVKVYDVLNQNLSATRTIS ATSIRDEENTVLRRYVMFSLAYKIGNFTGSEKGGKRRPRD >Mature_919_residues TKIYSFLSFLFLFVLTANAQNDVTLRGTVLDVNTQLPLEMATVYFTTIKDSTVIEYATTDKNGAFRMDIKKYEKPVFLKV SYMGYQTYYEEYKGLTENKDFGKLYMIENVNTLNDVVIKTEAAPITIKKDTLEFNAASYKVRPDSNVETLLKQLPGFDVD NDGKITVNGREVNQVLVNGKTFFDKDGAIAIKNLPADIIKKIQVSDFKTKKEELSKQESTSDFSSINITIDEKKNKGYFG KIMGGYGTDDRYEANVNLNYFNNKQKISLLASSNNINSTGFSMDDVFDNMGGGRNSSGRGGSTSSGSSGKGITQSNLVGV NYSDDWTEKLLAMGSYNFSNTINNNDSKSNQLSFLPTGNIITEAEAKTRNESTGNNVNFELEYKISPSIRLVVAPKLNQS RTNSNSTSSSFSEDEDGNELNRSTSKSYSEGDNTNFGNTINFNKSFEKKSRNFSFVFTNNNTNNTADGLNLSETIFYQDN QPNDERNQTTKKKNTSDSYSADIEYTEPITDSLRVRFGSNFDWKSTSNDERTFNFDPDTQEYTDLNLALSNYTSSIQNSV TPKVGVTLQKNKFTLNLDSRTSIVNFDNHSLYLNNATDLSKKYALPFATAVLRYKFDRSKNLSFKYDYSNTLPSAAQLMP VVNLNNPLNTIIGNPDLHPVEKNSINFNYRNYDFRSRSGYSLYIKGDYYDNDIVSTSIYDESGKRTTTYVNISGVYNASI GANWNQSIKSGAHTLRYGLGLNAGYTFDKGFTNAVLYNAKSTSITPKVYLSYDYGDVLTIAPSYNLSYNQSKYENYSRDA TSNVVHRINLQTTTYWPENLIFGNDFGYTYNSNISGDFKKDFYLWNTSLSYGFLNKTLYAKVKVYDVLNQNLSATRTISA TSIRDEENTVLRRYVMFSLAYKIGNFTGSEKGGKRRPRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103669; Mature: 103538
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIYSFLSFLFLFVLTANAQNDVTLRGTVLDVNTQLPLEMATVYFTTIKDSTVIEYATT CHHHHHHHHHHHHHHEECCCCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCEEEEEEEC DKNGAFRMDIKKYEKPVFLKVSYMGYQTYYEEYKGLTENKDFGKLYMIENVNTLNDVVIK CCCCEEEEEHHHCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEE TEAAPITIKKDTLEFNAASYKVRPDSNVETLLKQLPGFDVDNDGKITVNGREVNQVLVNG ECCCEEEEEECCEEECCEEEEECCCCCHHHHHHHCCCCCCCCCCEEEECCCEEEEEEECC KTFFDKDGAIAIKNLPADIIKKIQVSDFKTKKEELSKQESTSDFSSINITIDEKKNKGYF CEEECCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEE GKIMGGYGTDDRYEANVNLNYFNNKQKISLLASSNNINSTGFSMDDVFDNMGGGRNSSGR EEEECCCCCCCCEEEEEEEEEECCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCC GGSTSSGSSGKGITQSNLVGVNYSDDWTEKLLAMGSYNFSNTINNNDSKSNQLSFLPTGN CCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC IITEAEAKTRNESTGNNVNFELEYKISPSIRLVVAPKLNQSRTNSNSTSSSFSEDEDGNE EEECCHHHCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCH LNRSTSKSYSEGDNTNFGNTINFNKSFEKKSRNFSFVFTNNNTNNTADGLNLSETIFYQD HCCCCCCCCCCCCCCCCCCEEECCCCHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEECC NQPNDERNQTTKKKNTSDSYSADIEYTEPITDSLRVRFGSNFDWKSTSNDERTFNFDPDT CCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCC QEYTDLNLALSNYTSSIQNSVTPKVGVTLQKNKFTLNLDSRTSIVNFDNHSLYLNNATDL CCCCEEEEEEHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCEEEEECCCEEEECCCCCC SKKYALPFATAVLRYKFDRSKNLSFKYDYSNTLPSAAQLMPVVNLNNPLNTIIGNPDLHP HHHHCCHHHHEEHEEEECCCCCCEEEECCCCCCCCHHHEEEEEECCCCHHHHCCCCCCCC VEKNSINFNYRNYDFRSRSGYSLYIKGDYYDNDIVSTSIYDESGKRTTTYVNISGVYNAS CCCCCEEEEEECCCCCCCCCCEEEEECCEECCCEEEEEEECCCCCEEEEEEEEEEEEECC IGANWNQSIKSGAHTLRYGLGLNAGYTFDKGFTNAVLYNAKSTSITPKVYLSYDYGDVLT CCCCCCHHHHCCCCEEEEECCCCCCCEECCCCCCEEEEECCCCCCCEEEEEEECCCCEEE IAPSYNLSYNQSKYENYSRDATSNVVHRINLQTTTYWPENLIFGNDFGYTYNSNISGDFK EECCCCCCCCCHHHHCCCCCCCCCEEEEEEEEEEEECCCCCEEECCCCEEECCCCCCCCC KDFYLWNTSLSYGFLNKTLYAKVKVYDVLNQNLSATRTISATSIRDEENTVLRRYVMFSL CEEEEEECCCCCCCCCCEEEEEEEEEEHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH AYKIGNFTGSEKGGKRRPRD HHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TKIYSFLSFLFLFVLTANAQNDVTLRGTVLDVNTQLPLEMATVYFTTIKDSTVIEYATT HHHHHHHHHHHHHHEECCCCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCEEEEEEEC DKNGAFRMDIKKYEKPVFLKVSYMGYQTYYEEYKGLTENKDFGKLYMIENVNTLNDVVIK CCCCEEEEEHHHCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEE TEAAPITIKKDTLEFNAASYKVRPDSNVETLLKQLPGFDVDNDGKITVNGREVNQVLVNG ECCCEEEEEECCEEECCEEEEECCCCCHHHHHHHCCCCCCCCCCEEEECCCEEEEEEECC KTFFDKDGAIAIKNLPADIIKKIQVSDFKTKKEELSKQESTSDFSSINITIDEKKNKGYF CEEECCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEE GKIMGGYGTDDRYEANVNLNYFNNKQKISLLASSNNINSTGFSMDDVFDNMGGGRNSSGR EEEECCCCCCCCEEEEEEEEEECCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCC GGSTSSGSSGKGITQSNLVGVNYSDDWTEKLLAMGSYNFSNTINNNDSKSNQLSFLPTGN CCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC IITEAEAKTRNESTGNNVNFELEYKISPSIRLVVAPKLNQSRTNSNSTSSSFSEDEDGNE EEECCHHHCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCH LNRSTSKSYSEGDNTNFGNTINFNKSFEKKSRNFSFVFTNNNTNNTADGLNLSETIFYQD HCCCCCCCCCCCCCCCCCCEEECCCCHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEECC NQPNDERNQTTKKKNTSDSYSADIEYTEPITDSLRVRFGSNFDWKSTSNDERTFNFDPDT CCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCC QEYTDLNLALSNYTSSIQNSVTPKVGVTLQKNKFTLNLDSRTSIVNFDNHSLYLNNATDL CCCCEEEEEEHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCEEEEECCCEEEECCCCCC SKKYALPFATAVLRYKFDRSKNLSFKYDYSNTLPSAAQLMPVVNLNNPLNTIIGNPDLHP HHHHCCHHHHEEHEEEECCCCCCEEEECCCCCCCCHHHEEEEEECCCCHHHHCCCCCCCC VEKNSINFNYRNYDFRSRSGYSLYIKGDYYDNDIVSTSIYDESGKRTTTYVNISGVYNAS CCCCCEEEEEECCCCCCCCCCEEEEECCEECCCEEEEEEECCCCCEEEEEEEEEEEEECC IGANWNQSIKSGAHTLRYGLGLNAGYTFDKGFTNAVLYNAKSTSITPKVYLSYDYGDVLT CCCCCCHHHHCCCCEEEEECCCCCCCEECCCCCCEEEEECCCCCCCEEEEEEECCCCEEE IAPSYNLSYNQSKYENYSRDATSNVVHRINLQTTTYWPENLIFGNDFGYTYNSNISGDFK EECCCCCCCCCHHHHCCCCCCCCCEEEEEEEEEEEECCCCCEEECCCCEEECCCCCCCCC KDFYLWNTSLSYGFLNKTLYAKVKVYDVLNQNLSATRTISATSIRDEENTVLRRYVMFSL CEEEEEECCCCCCCCCCEEEEEEEEEEHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH AYKIGNFTGSEKGGKRRPRD HHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA