| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299617
Identifier: 146299617
GI number: 146299617
Start: 2141020
End: 2142012
Strand: Direct
Name: 146299617
Synonym: Fjoh_1857
Alternate gene names: NA
Gene position: 2141020-2142012 (Clockwise)
Preceding gene: 146299616
Following gene: 146299618
Centisome position: 35.12
GC content: 34.34
Gene sequence:
>993_bases ATGATGAAAGTAAGGAATTTTTTAATTGCTGGTTTTGCCCTTATTAGTGGATTTGTTTGCAATGCACAATCTAATTTATT AAATGCTAAAACGGCTGATCAAATAGGGCACAAAACTGCAGCACAGCAAATTTCTGATAACGACAAGCCTTTGGCTTATG GTTATGTAGATGACAGGGATGTTTTAATGGCAAAGACAACTTGGGAAATTATTGATTTAAATGAGAAAATCAATTTTCCA TTATATTTTCCGGTAGATACTGTGAATATTGGACCTGAAAGGCGTTCTCTTTATGATGTTTTGACCAAGGCCATTCGAAA CGGCAGAATAACTGAAGTTTATACAGATAGTTATTTTAATACCAAAAAATCACTAAAAGATATTGAAGGATCTTTGACTC GTGTTGATACTACAGATGCTGGTAGAGAACTTGTGAATCAATATCCAGATGATTTCAGAACACGGGTTGTTAAGAAAAAA GTAGTGACAGGAACTGGTAAGAAAAAAGTAGTTAGCTATGTTGATCAAACAGTAGGGCCTACAAGAACGATTCCTGCTGA ATATATCTTAAAGCAAGATCTTACTGCTGCCGATGTTTCACAATATAAAATTAAAGGGTACTGGTATTTTGATAAACGTC AGAGTGAATTAAAATATCGTCTGCTGGGAATTTGTCCAGTAACTCCAGATGTTTATACAATGAATAGCGATGAAAAAGAC TATATAGAACTGTTTTGGGTTTTCTTTCCTAATGCGCGGGAAGTGCTTCATGAAGCAAAAGCCTTTAATGATAAAAACTC TGCGCTTCCTATTTCGTTTGATCAAATCTTAAATTCAAGACGTTTTAATGCGGTTATCTATAAAGAAGAAAACGTATACG GAGACCGTGAAATTAAAGATTACATTAAAGACAATGCGCAAAGTCAATTGTTAGAATCTGAAAGGGTAAAAGAGAAGATT CGCAACTTCGAAGAAGATATGTGGAATTACTAA
Upstream 100 bases:
>100_bases ATTGCTCAATTTTAAATTACTTTTTAGTAATTTTGATTTTCTGTAAGAAAAATAACAATATTGAATATAAAATTACGTTT AATTTCTTATAATATTTATC
Downstream 100 bases:
>100_bases GTGCTTAAATCCAAATTATACAAAAAACTCTTGCTACCTTTGCAGTAAGAGTTTTTTTTATTTTATCTATATTACCAATG CTTGATTATTTAATCGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Gliding Motility Protein GldN; Protein Involved In Gliding Motility Gldn
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MMKVRNFLIAGFALISGFVCNAQSNLLNAKTADQIGHKTAAQQISDNDKPLAYGYVDDRDVLMAKTTWEIIDLNEKINFP LYFPVDTVNIGPERRSLYDVLTKAIRNGRITEVYTDSYFNTKKSLKDIEGSLTRVDTTDAGRELVNQYPDDFRTRVVKKK VVTGTGKKKVVSYVDQTVGPTRTIPAEYILKQDLTAADVSQYKIKGYWYFDKRQSELKYRLLGICPVTPDVYTMNSDEKD YIELFWVFFPNAREVLHEAKAFNDKNSALPISFDQILNSRRFNAVIYKEENVYGDREIKDYIKDNAQSQLLESERVKEKI RNFEEDMWNY
Sequences:
>Translated_330_residues MMKVRNFLIAGFALISGFVCNAQSNLLNAKTADQIGHKTAAQQISDNDKPLAYGYVDDRDVLMAKTTWEIIDLNEKINFP LYFPVDTVNIGPERRSLYDVLTKAIRNGRITEVYTDSYFNTKKSLKDIEGSLTRVDTTDAGRELVNQYPDDFRTRVVKKK VVTGTGKKKVVSYVDQTVGPTRTIPAEYILKQDLTAADVSQYKIKGYWYFDKRQSELKYRLLGICPVTPDVYTMNSDEKD YIELFWVFFPNAREVLHEAKAFNDKNSALPISFDQILNSRRFNAVIYKEENVYGDREIKDYIKDNAQSQLLESERVKEKI RNFEEDMWNY >Mature_330_residues MMKVRNFLIAGFALISGFVCNAQSNLLNAKTADQIGHKTAAQQISDNDKPLAYGYVDDRDVLMAKTTWEIIDLNEKINFP LYFPVDTVNIGPERRSLYDVLTKAIRNGRITEVYTDSYFNTKKSLKDIEGSLTRVDTTDAGRELVNQYPDDFRTRVVKKK VVTGTGKKKVVSYVDQTVGPTRTIPAEYILKQDLTAADVSQYKIKGYWYFDKRQSELKYRLLGICPVTPDVYTMNSDEKD YIELFWVFFPNAREVLHEAKAFNDKNSALPISFDQILNSRRFNAVIYKEENVYGDREIKDYIKDNAQSQLLESERVKEKI RNFEEDMWNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38219; Mature: 38219
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKVRNFLIAGFALISGFVCNAQSNLLNAKTADQIGHKTAAQQISDNDKPLAYGYVDDRD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC VLMAKTTWEIIDLNEKINFPLYFPVDTVNIGPERRSLYDVLTKAIRNGRITEVYTDSYFN EEEEECEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHH TKKSLKDIEGSLTRVDTTDAGRELVNQYPDDFRTRVVKKKVVTGTGKKKVVSYVDQTVGP HHHHHHHHCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC TRTIPAEYILKQDLTAADVSQYKIKGYWYFDKRQSELKYRLLGICPVTPDVYTMNSDEKD CCCCCHHHHHHCCCCHHCCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCEEECCCCCCC YIELFWVFFPNAREVLHEAKAFNDKNSALPISFDQILNSRRFNAVIYKEENVYGDREIKD EEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEHHHHHCCCCCEEEEEECCCCCCCHHHHH YIKDNAQSQLLESERVKEKIRNFEEDMWNY HHHCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMKVRNFLIAGFALISGFVCNAQSNLLNAKTADQIGHKTAAQQISDNDKPLAYGYVDDRD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC VLMAKTTWEIIDLNEKINFPLYFPVDTVNIGPERRSLYDVLTKAIRNGRITEVYTDSYFN EEEEECEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHH TKKSLKDIEGSLTRVDTTDAGRELVNQYPDDFRTRVVKKKVVTGTGKKKVVSYVDQTVGP HHHHHHHHCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC TRTIPAEYILKQDLTAADVSQYKIKGYWYFDKRQSELKYRLLGICPVTPDVYTMNSDEKD CCCCCHHHHHHCCCCHHCCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCEEECCCCCCC YIELFWVFFPNAREVLHEAKAFNDKNSALPISFDQILNSRRFNAVIYKEENVYGDREIKD EEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEHHHHHCCCCCEEEEEECCCCCCCHHHHH YIKDNAQSQLLESERVKEKIRNFEEDMWNY HHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA