| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299612
Identifier: 146299612
GI number: 146299612
Start: 2134657
End: 2135808
Strand: Direct
Name: 146299612
Synonym: Fjoh_1852
Alternate gene names: NA
Gene position: 2134657-2135808 (Clockwise)
Preceding gene: 146299611
Following gene: 146299613
Centisome position: 35.01
GC content: 34.03
Gene sequence:
>1152_bases ATGGAATTTGACTTTCTAGAGCCTTTAAATGACGGAATTTTAAAATTCATTAGTTCATTGTCTACACAAGAACTGGGGAG CAAAATTGTTTTGCATACTCAGGATCAATTTCCGGATATAAGCAAAATTAATATTGCGATCGTAGGTGTTCTCGAAGATC GACGCAACATTAATATGGTTAATGAAGTTAACCTTACTGCAGTTCGTAAAAAGCTTTACGGAATGTTTCCTGGTAACTGG GATGCATCAATTGCAGATTTAGGAGATATTCTTGCAGGTGATTCTGTAGAGGATACTTATTTTGCAGTAAAAAAAGTTGT AGCTGCTTTAATTAAGAATAAAGTGATTCCTATAGTCCTGGGAGGTTCTCAGGATTTAACCTACGCTTTGTATCGTGCTT ACGACGATTTAGAGCAAATGGTAAATATGGTTTCTGTAGATAATAAATTTGATTTTGGTAAAGAAAATGAATCGGTTTCG GCTAATTCTTACCTAACGCAGATTATTATTAATGAACCAAACAACCTGTTTAATTACTGTAATATAGGATATCAGACTTA TTACAATTCTCAGGAAGAAATTGATTTAATTGAAAAGCTGTTTTTTGATGCTTACCGTTTAGGTGAAATTTCAAATAATA TTGCTTTGGCTGAGCCTGTATTTCGAGATGCAGATTTAGTTAGTATTGATTTGAATTCTGTAAAGTCTTCTGCATCAGGC AATATGGTTTCTTTTGAGCCAAATGGTTTCAACGGAAAAGAGATTTGCTCTCTGGCTAGATATGCCGGAATAAGTGATAA AGTTTCTTCTTTTGGAATCTTTAATCATAATAGTACATTGCCGGAATCTCCTATAATGGCTCAGATAATCTGGTATTTTA TAGAAGGATATCATTACAGATCAAAAGAATATCCATTTGGAAGCAGAACAAATTATTTAAAATACATCGTTCCGCTGGAA GAAGAGGAACTTGTGTTTTATAAAAGTGACAAAACTGAGCGTTGGTGGATTGAAATTCCATTCGAAACAAACGGCAGCAA TAAATTAAAAAGAAATACGTTATTACCATGTTCTTACGACGAATATTTGTCAGCTTGCAATCAAGAATTGCCAGAAAGAT GGTGGAAAGCACAGCGAAAAAACGCTTTGTAG
Upstream 100 bases:
>100_bases CGAGAAAAAAGCACCGGCTAAAAAAACAGCAGCAAAGAAAACCACAGCAGCTAAAAAAACTACAACCGCTAAAAAAGCAC CAGCAAAAAAGAAATAAAGA
Downstream 100 bases:
>100_bases AAGAAAATTTCGAAAGAAATCTTAAAATATTTAATTTTTAGGAAAATAAGTTAAAATTATTAGTAAGAAAAGGTGTATTT ATTATAAAATTTAACGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Arginase; Formiminoglutamase-Related Protein
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MEFDFLEPLNDGILKFISSLSTQELGSKIVLHTQDQFPDISKINIAIVGVLEDRRNINMVNEVNLTAVRKKLYGMFPGNW DASIADLGDILAGDSVEDTYFAVKKVVAALIKNKVIPIVLGGSQDLTYALYRAYDDLEQMVNMVSVDNKFDFGKENESVS ANSYLTQIIINEPNNLFNYCNIGYQTYYNSQEEIDLIEKLFFDAYRLGEISNNIALAEPVFRDADLVSIDLNSVKSSASG NMVSFEPNGFNGKEICSLARYAGISDKVSSFGIFNHNSTLPESPIMAQIIWYFIEGYHYRSKEYPFGSRTNYLKYIVPLE EEELVFYKSDKTERWWIEIPFETNGSNKLKRNTLLPCSYDEYLSACNQELPERWWKAQRKNAL
Sequences:
>Translated_383_residues MEFDFLEPLNDGILKFISSLSTQELGSKIVLHTQDQFPDISKINIAIVGVLEDRRNINMVNEVNLTAVRKKLYGMFPGNW DASIADLGDILAGDSVEDTYFAVKKVVAALIKNKVIPIVLGGSQDLTYALYRAYDDLEQMVNMVSVDNKFDFGKENESVS ANSYLTQIIINEPNNLFNYCNIGYQTYYNSQEEIDLIEKLFFDAYRLGEISNNIALAEPVFRDADLVSIDLNSVKSSASG NMVSFEPNGFNGKEICSLARYAGISDKVSSFGIFNHNSTLPESPIMAQIIWYFIEGYHYRSKEYPFGSRTNYLKYIVPLE EEELVFYKSDKTERWWIEIPFETNGSNKLKRNTLLPCSYDEYLSACNQELPERWWKAQRKNAL >Mature_383_residues MEFDFLEPLNDGILKFISSLSTQELGSKIVLHTQDQFPDISKINIAIVGVLEDRRNINMVNEVNLTAVRKKLYGMFPGNW DASIADLGDILAGDSVEDTYFAVKKVVAALIKNKVIPIVLGGSQDLTYALYRAYDDLEQMVNMVSVDNKFDFGKENESVS ANSYLTQIIINEPNNLFNYCNIGYQTYYNSQEEIDLIEKLFFDAYRLGEISNNIALAEPVFRDADLVSIDLNSVKSSASG NMVSFEPNGFNGKEICSLARYAGISDKVSSFGIFNHNSTLPESPIMAQIIWYFIEGYHYRSKEYPFGSRTNYLKYIVPLE EEELVFYKSDKTERWWIEIPFETNGSNKLKRNTLLPCSYDEYLSACNQELPERWWKAQRKNAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43734; Mature: 43734
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFDFLEPLNDGILKFISSLSTQELGSKIVLHTQDQFPDISKINIAIVGVLEDRRNINMV CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCCEE NEVNLTAVRKKLYGMFPGNWDASIADLGDILAGDSVEDTYFAVKKVVAALIKNKVIPIVL HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEE GGSQDLTYALYRAYDDLEQMVNMVSVDNKFDFGKENESVSANSYLTQIIINEPNNLFNYC CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHH NIGYQTYYNSQEEIDLIEKLFFDAYRLGEISNNIALAEPVFRDADLVSIDLNSVKSSASG CCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEHHHHHCCCCC NMVSFEPNGFNGKEICSLARYAGISDKVSSFGIFNHNSTLPESPIMAQIIWYFIEGYHYR CEEEECCCCCCHHHHHHHHHHCCCCHHHHHCEEECCCCCCCCCHHHHHHHHHHHHCCEEC SKEYPFGSRTNYLKYIVPLEEEELVFYKSDKTERWWIEIPFETNGSNKLKRNTLLPCSYD CCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCHH EYLSACNQELPERWWKAQRKNAL HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEFDFLEPLNDGILKFISSLSTQELGSKIVLHTQDQFPDISKINIAIVGVLEDRRNINMV CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCCEE NEVNLTAVRKKLYGMFPGNWDASIADLGDILAGDSVEDTYFAVKKVVAALIKNKVIPIVL HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEE GGSQDLTYALYRAYDDLEQMVNMVSVDNKFDFGKENESVSANSYLTQIIINEPNNLFNYC CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHH NIGYQTYYNSQEEIDLIEKLFFDAYRLGEISNNIALAEPVFRDADLVSIDLNSVKSSASG CCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEHHHHHCCCCC NMVSFEPNGFNGKEICSLARYAGISDKVSSFGIFNHNSTLPESPIMAQIIWYFIEGYHYR CEEEECCCCCCHHHHHHHHHHCCCCHHHHHCEEECCCCCCCCCHHHHHHHHHHHHCCEEC SKEYPFGSRTNYLKYIVPLEEEELVFYKSDKTERWWIEIPFETNGSNKLKRNTLLPCSYD CCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCHH EYLSACNQELPERWWKAQRKNAL HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA