| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299531
Identifier: 146299531
GI number: 146299531
Start: 2052096
End: 2052845
Strand: Direct
Name: 146299531
Synonym: Fjoh_1771
Alternate gene names: NA
Gene position: 2052096-2052845 (Clockwise)
Preceding gene: 146299530
Following gene: 146299532
Centisome position: 33.66
GC content: 31.07
Gene sequence:
>750_bases ATGAAAAATAAACTAGGAGTATTCGTTGTTTGCTTATTTTGTCAAATAATGCTTGGACAAAACGGTACAAGAAAGTCGCT GCACGGTCAGGTTACGAACAAATCACTTGCTATAGAAAGTGGTTATGTAATGAATATTAATGCAAAATCCAGAACTTTTA TAGGTCCGGGCGGATTGTTTGATATTTTGGCTCAGCCAAAAGATACGCTGCTTTTTACCGGTATAGCCTTTCAGTCTAAA AAAATTGTTTTAACAGAGAAAGACTGCTCGCAGATTCTTTTTTCTGTGTCTTTAGATTTGGTTAGTAATGAATTAAAAGA GGTTTTAGTTCGTAAAGATTTAAAAGTAAAATCACTTGACAGCAACACTCAGAAATATGTTGATATGCAGTTTGAAGATG ACAGACAATCGACTGCAAAAAATACAGTAATGTATTCTGATCAAACGATTAAATACGGAACTGATTTTGTCCGAATTTTT AAAGATGTTAAAAAACTTCTTTCTAAAAATAATGAAAAAGAAGAAGTGATTTCAGATATTGCTTTTGTTGAATATTCTAA AGCAAATTTTAAACCCGATTTTTATACTAAAACACTGGGTTTAAAACCAGATGAAGTTGATTTGTTTTTGATGTTTTGTT CAAACGATCCAGAATCAAAAAGACATCTTAATGAAGATCAGAAATTTGAGCTGATTGATTTTTTAATCAACAAAAATGCC GAATTTAAAAAAGTGAATGCCGCTCAATAA
Upstream 100 bases:
>100_bases GATGATGCCGATTTTGCCGTATCTTTGAATACAAAGAACAAAACAATGAGTATGTTTTTGATAACAGATTTAGCCCGAAA ATATCTAATAATTCTCGAAA
Downstream 100 bases:
>100_bases TGAAAAAAAAATGGTTTTATCCTTTACTGGGAATATTGTTCTTATCGCTTTCGGCTTTTGCATTTCATAAATTTTATGTA GGTGTTTTTCAGGTAGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKNKLGVFVVCLFCQIMLGQNGTRKSLHGQVTNKSLAIESGYVMNINAKSRTFIGPGGLFDILAQPKDTLLFTGIAFQSK KIVLTEKDCSQILFSVSLDLVSNELKEVLVRKDLKVKSLDSNTQKYVDMQFEDDRQSTAKNTVMYSDQTIKYGTDFVRIF KDVKKLLSKNNEKEEVISDIAFVEYSKANFKPDFYTKTLGLKPDEVDLFLMFCSNDPESKRHLNEDQKFELIDFLINKNA EFKKVNAAQ
Sequences:
>Translated_249_residues MKNKLGVFVVCLFCQIMLGQNGTRKSLHGQVTNKSLAIESGYVMNINAKSRTFIGPGGLFDILAQPKDTLLFTGIAFQSK KIVLTEKDCSQILFSVSLDLVSNELKEVLVRKDLKVKSLDSNTQKYVDMQFEDDRQSTAKNTVMYSDQTIKYGTDFVRIF KDVKKLLSKNNEKEEVISDIAFVEYSKANFKPDFYTKTLGLKPDEVDLFLMFCSNDPESKRHLNEDQKFELIDFLINKNA EFKKVNAAQ >Mature_249_residues MKNKLGVFVVCLFCQIMLGQNGTRKSLHGQVTNKSLAIESGYVMNINAKSRTFIGPGGLFDILAQPKDTLLFTGIAFQSK KIVLTEKDCSQILFSVSLDLVSNELKEVLVRKDLKVKSLDSNTQKYVDMQFEDDRQSTAKNTVMYSDQTIKYGTDFVRIF KDVKKLLSKNNEKEEVISDIAFVEYSKANFKPDFYTKTLGLKPDEVDLFLMFCSNDPESKRHLNEDQKFELIDFLINKNA EFKKVNAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28376; Mature: 28376
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKLGVFVVCLFCQIMLGQNGTRKSLHGQVTNKSLAIESGYVMNINAKSRTFIGPGGLF CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEECCEEEEECCCCCEEECCCCHH DILAQPKDTLLFTGIAFQSKKIVLTEKDCSQILFSVSLDLVSNELKEVLVRKDLKVKSLD HHHCCCCCEEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC SNTQKYVDMQFEDDRQSTAKNTVMYSDQTIKYGTDFVRIFKDVKKLLSKNNEKEEVISDI CCCCEEEEEEECCCHHHHHHCEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AFVEYSKANFKPDFYTKTLGLKPDEVDLFLMFCSNDPESKRHLNEDQKFELIDFLINKNA HHEEECCCCCCCCCEEEECCCCCCCEEEEEEEECCCCHHHHHCCCCCHHHHHHHHHCCCC EFKKVNAAQ CCCCCCCCC >Mature Secondary Structure MKNKLGVFVVCLFCQIMLGQNGTRKSLHGQVTNKSLAIESGYVMNINAKSRTFIGPGGLF CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEECCEEEEECCCCCEEECCCCHH DILAQPKDTLLFTGIAFQSKKIVLTEKDCSQILFSVSLDLVSNELKEVLVRKDLKVKSLD HHHCCCCCEEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC SNTQKYVDMQFEDDRQSTAKNTVMYSDQTIKYGTDFVRIFKDVKKLLSKNNEKEEVISDI CCCCEEEEEEECCCHHHHHHCEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AFVEYSKANFKPDFYTKTLGLKPDEVDLFLMFCSNDPESKRHLNEDQKFELIDFLINKNA HHEEECCCCCCCCCEEEECCCCCCCEEEEEEEECCCCHHHHHCCCCCHHHHHHHHHCCCC EFKKVNAAQ CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA