| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299529
Identifier: 146299529
GI number: 146299529
Start: 2050624
End: 2051391
Strand: Direct
Name: 146299529
Synonym: Fjoh_1769
Alternate gene names: NA
Gene position: 2050624-2051391 (Clockwise)
Preceding gene: 146299526
Following gene: 146299530
Centisome position: 33.63
GC content: 34.38
Gene sequence:
>768_bases TTGACAAAGAGTATTGTTTGTTTTTTGGTAGCTGTTATAAGTCAGAATTCCTGGTCGCAAAATCAGGAACGTACTGTTAT TAACGGAAAAATTACTTCAAATACAAATGATTTGGAAGGGGTGTATGTTGTAAATGCACAAACAGAAACAATGACAACGA CCAATGCCTCCGGAGCTTTTTCAATTTTGGCTAAACCAGATGATGTACTTGTTTTTTCTTCTATTCAATTTAAGGAAAAC AGGGTTTTGCTGACTTGTGAAAATTTTACTGATTTAAATTTTACAGTCAGAATGAATTTGGTTATGCATCAATTACAAGA AGTTGTAATTAAAAGATATGACAATATAAATGCTGTGGCTTTGGGAATTGTGCCTTCTGGACAGAAAAGTTATACTGAAG CCGAAAGAAAGCTTCGTACGGCTACAGCGCTCGATGCTACTGCAAATGCCGGAACGATGGCTGGCGGATCTATCTCGGCA GATCCGTTATTAAACTTTTTATCAGGCAGAACAGCAATGCTGAAAAAAGAAGTTGAAGTAGAAAAGAAAGAATTTTTCAT GAAATTATTAGAAAGAATGTTTAGTCTGGAGCATTTTGTTGAGCGGTTAAAAATTCCGGCAGAATATGTAAAAGGCTTTG AATATTATGCTGTCGAAAATAAACAGTTTACGACTATCTTAAATTCTAAAAATAAAACTTCGACTGAATTTTTAATGGGC GAATTGGCTGTAAAATATAAAGAAATCATTGCAGGTGAAGGGAAATAA
Upstream 100 bases:
>100_bases ATGATAGTTTAATTAACATATTTTTACCAACTCGTTAATACTATATTTGGAAGACATTAGGATATTTTTACCTTTTTAAT AATTTTCTAATTTATTCATT
Downstream 100 bases:
>100_bases TATTTTTTATATTGCCTTATTTTTGTTTTTTGCGCAGTTAAGTTTTGGGCAAAAAGCTTCTTCTAAAGAAATTTCAGGCC AAATTTTCGAAAAATCTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTKSIVCFLVAVISQNSWSQNQERTVINGKITSNTNDLEGVYVVNAQTETMTTTNASGAFSILAKPDDVLVFSSIQFKEN RVLLTCENFTDLNFTVRMNLVMHQLQEVVIKRYDNINAVALGIVPSGQKSYTEAERKLRTATALDATANAGTMAGGSISA DPLLNFLSGRTAMLKKEVEVEKKEFFMKLLERMFSLEHFVERLKIPAEYVKGFEYYAVENKQFTTILNSKNKTSTEFLMG ELAVKYKEIIAGEGK
Sequences:
>Translated_255_residues MTKSIVCFLVAVISQNSWSQNQERTVINGKITSNTNDLEGVYVVNAQTETMTTTNASGAFSILAKPDDVLVFSSIQFKEN RVLLTCENFTDLNFTVRMNLVMHQLQEVVIKRYDNINAVALGIVPSGQKSYTEAERKLRTATALDATANAGTMAGGSISA DPLLNFLSGRTAMLKKEVEVEKKEFFMKLLERMFSLEHFVERLKIPAEYVKGFEYYAVENKQFTTILNSKNKTSTEFLMG ELAVKYKEIIAGEGK >Mature_254_residues TKSIVCFLVAVISQNSWSQNQERTVINGKITSNTNDLEGVYVVNAQTETMTTTNASGAFSILAKPDDVLVFSSIQFKENR VLLTCENFTDLNFTVRMNLVMHQLQEVVIKRYDNINAVALGIVPSGQKSYTEAERKLRTATALDATANAGTMAGGSISAD PLLNFLSGRTAMLKKEVEVEKKEFFMKLLERMFSLEHFVERLKIPAEYVKGFEYYAVENKQFTTILNSKNKTSTEFLMGE LAVKYKEIIAGEGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28515; Mature: 28384
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSIVCFLVAVISQNSWSQNQERTVINGKITSNTNDLEGVYVVNAQTETMTTTNASGAF CCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEECCCCCEE SILAKPDDVLVFSSIQFKENRVLLTCENFTDLNFTVRMNLVMHQLQEVVIKRYDNINAVA EEEECCCCEEEEEEEEECCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEE LGIVPSGQKSYTEAERKLRTATALDATANAGTMAGGSISADPLLNFLSGRTAMLKKEVEV EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH EKKEFFMKLLERMFSLEHFVERLKIPAEYVKGFEYYAVENKQFTTILNSKNKTSTEFLMG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCEEEEEECCCCCCHHHHHHH ELAVKYKEIIAGEGK HHHHHHHHHHCCCCC >Mature Secondary Structure TKSIVCFLVAVISQNSWSQNQERTVINGKITSNTNDLEGVYVVNAQTETMTTTNASGAF CCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEECCCCCEE SILAKPDDVLVFSSIQFKENRVLLTCENFTDLNFTVRMNLVMHQLQEVVIKRYDNINAVA EEEECCCCEEEEEEEEECCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEE LGIVPSGQKSYTEAERKLRTATALDATANAGTMAGGSISADPLLNFLSGRTAMLKKEVEV EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH EKKEFFMKLLERMFSLEHFVERLKIPAEYVKGFEYYAVENKQFTTILNSKNKTSTEFLMG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCEEEEEECCCCCCHHHHHHH ELAVKYKEIIAGEGK HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA