| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299464
Identifier: 146299464
GI number: 146299464
Start: 1974864
End: 1975517
Strand: Direct
Name: 146299464
Synonym: Fjoh_1704
Alternate gene names: NA
Gene position: 1974864-1975517 (Clockwise)
Preceding gene: 146299463
Following gene: 146299466
Centisome position: 32.39
GC content: 33.94
Gene sequence:
>654_bases ATGAAAAATATGATTTTTGTAATTGGTATGGCCTTGATTCTCTCTTGCTGCCAAAAAGATAATAAAGAGATTTTAGTTTC TAAAAATGAAAACAAAACAGAAATAATTGCAGAACAGACACCCAGAATTGAAATTGATTACGGTAAATATTATGCAGAAG CAAAAGGATACGCTCTGCAAAATAATTTAAATACAGATAAATTTATTCTCATTGATTTAGGATTGCATTCTGGTTATAAA AGATTCTTTGTTTACGATTTTAAAGAGAATACAATTTCAAAATCTTATATGGTAAGTCATGGATGCGGCGATAATCCCTG GGGGGGAACGTATTCTAAAGACAAGCCGAAAATAAGTAACGAATTTGATTCGCATTGTTCGTCACTGGGTAAATACGTTA TTTTAGATCGCGGTGTAAGCCAGTGGGGAATAAAAGTCAATTATGTTTTGCAAGGAAAAGAAAAAAGTAATTCTAATGCC CGAAAACGAGCTATTGTACTGCATTCATGGGAAGCCGTTCCAAAAGATGAGGTTTACCCATACGGAACCCCTGAAGGCTG GGGCTGTCCTGCTGTATCAAACGAAAGCATGAAAGAAATTGATGAACTTTTGAAAACAAATAAAAATGTTCTGATGTGGA TCATTAAATCATAA
Upstream 100 bases:
>100_bases TTTGACAAAATTTCACTTTTAAACCTGTTCAATTTTTGAACAGGTTTTTTTATACTTTTAAAGTAAGATTTCCGTTTTGG ATTTTGGGTAAATTGTAAAC
Downstream 100 bases:
>100_bases GTTTTCAAAAGATCTTTTTCTTCTAATGAAAATAAAATAACTGTTTTAAAAAATTATTGAACCCTGAATTTCTCTCTATA CTCAATAGGTTTCATACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKNMIFVIGMALILSCCQKDNKEILVSKNENKTEIIAEQTPRIEIDYGKYYAEAKGYALQNNLNTDKFILIDLGLHSGYK RFFVYDFKENTISKSYMVSHGCGDNPWGGTYSKDKPKISNEFDSHCSSLGKYVILDRGVSQWGIKVNYVLQGKEKSNSNA RKRAIVLHSWEAVPKDEVYPYGTPEGWGCPAVSNESMKEIDELLKTNKNVLMWIIKS
Sequences:
>Translated_217_residues MKNMIFVIGMALILSCCQKDNKEILVSKNENKTEIIAEQTPRIEIDYGKYYAEAKGYALQNNLNTDKFILIDLGLHSGYK RFFVYDFKENTISKSYMVSHGCGDNPWGGTYSKDKPKISNEFDSHCSSLGKYVILDRGVSQWGIKVNYVLQGKEKSNSNA RKRAIVLHSWEAVPKDEVYPYGTPEGWGCPAVSNESMKEIDELLKTNKNVLMWIIKS >Mature_217_residues MKNMIFVIGMALILSCCQKDNKEILVSKNENKTEIIAEQTPRIEIDYGKYYAEAKGYALQNNLNTDKFILIDLGLHSGYK RFFVYDFKENTISKSYMVSHGCGDNPWGGTYSKDKPKISNEFDSHCSSLGKYVILDRGVSQWGIKVNYVLQGKEKSNSNA RKRAIVLHSWEAVPKDEVYPYGTPEGWGCPAVSNESMKEIDELLKTNKNVLMWIIKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24699; Mature: 24699
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNMIFVIGMALILSCCQKDNKEILVSKNENKTEIIAEQTPRIEIDYGKYYAEAKGYALQ CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCEEEEECCCEEECCCCEEEE NNLNTDKFILIDLGLHSGYKRFFVYDFKENTISKSYMVSHGCGDNPWGGTYSKDKPKISN CCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC EFDSHCSSLGKYVILDRGVSQWGIKVNYVLQGKEKSNSNARKRAIVLHSWEAVPKDEVYP HHHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCHHEEEEEEECCCCCCCCCCC YGTPEGWGCPAVSNESMKEIDELLKTNKNVLMWIIKS CCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEC >Mature Secondary Structure MKNMIFVIGMALILSCCQKDNKEILVSKNENKTEIIAEQTPRIEIDYGKYYAEAKGYALQ CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCEEEEECCCEEECCCCEEEE NNLNTDKFILIDLGLHSGYKRFFVYDFKENTISKSYMVSHGCGDNPWGGTYSKDKPKISN CCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC EFDSHCSSLGKYVILDRGVSQWGIKVNYVLQGKEKSNSNARKRAIVLHSWEAVPKDEVYP HHHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCHHEEEEEEECCCCCCCCCCC YGTPEGWGCPAVSNESMKEIDELLKTNKNVLMWIIKS CCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA