| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299340
Identifier: 146299340
GI number: 146299340
Start: 1832748
End: 1833398
Strand: Direct
Name: 146299340
Synonym: Fjoh_1580
Alternate gene names: NA
Gene position: 1832748-1833398 (Clockwise)
Preceding gene: 146299331
Following gene: 146299344
Centisome position: 30.06
GC content: 31.03
Gene sequence:
>651_bases ATGCCTCTATTTCAAACCATACAGTTTAACGAAACAACTAAAATCTTAATTTGGGAAATAACAGAATCTCTTGAAGAATT ATTAAGTAAAGTTGTGTTGAAGGAAAAAACACAAAAGAGACTCGACGGGATGAAATCGCAAATGCATCAGCGTGCTTTTT TAAGTGTTCGAATGCTGATTCAGGAAATGGGTTTTACTGATAAAGATTTGCATTATGACGAATTTGGGAAACCGTATTTT GATTGTCATAACTATATTTCAATAACACATTCCTATCATTTTGCAGCGATAATTATAAGCTGCGAAACAGTTGGAATTGA TATGGAATTGCAGCGAGAAAAAATCCAAAGAATCGCAGATAAATTTACAGATTATGAATGCAGTTATTTAGATTCATCTT TTACAGAAGAATATATAAAAAAACTTACCGTTATCTGGGGAGCCAAAGAAGCAATCTTTAAAATCAGAAATGAAAAAGGA ATCAGTTTTAAAGATCATATAAATGTGAGCAACTTTTCTTTAGATGAAACCCAAACACAGGCAAGTCTTCATTTTGATAA TTTGGTTAAGGATTTTGATGTGCATTATAAAGAAATCAAATCTGATAACTTTGAAGGGACTTTTACTTTGGTTTATGCTT TTGAGAAATAA
Upstream 100 bases:
>100_bases ATTTTTTGGGATATAGTGATTTTTCATACATTACAAGTATGACTTGAAAATCAGGAAAATAATTTATAATTAATCATTCA TAATTTACAATTAAAAAGAG
Downstream 100 bases:
>100_bases TCGCAATGACTTTACAGGGCGATTAAACTTCACTTTCTTTTTGTCTGTGTTGAAACATACTCATATACAAAAAAGTGCTC ATTTTTCGGGCACGTCTTTT
Product: phosphopantetheinyl transferase-like protein
Products: NA
Alternate protein names: Siderophore Biosynthesis Regulatory Protein; 4-Phosphopantetheinyl Transferase Superfamily Protein; Phosphopantetheinyl Transferase-Like Protein; Phosphopantetheinyl Transferase
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MPLFQTIQFNETTKILIWEITESLEELLSKVVLKEKTQKRLDGMKSQMHQRAFLSVRMLIQEMGFTDKDLHYDEFGKPYF DCHNYISITHSYHFAAIIISCETVGIDMELQREKIQRIADKFTDYECSYLDSSFTEEYIKKLTVIWGAKEAIFKIRNEKG ISFKDHINVSNFSLDETQTQASLHFDNLVKDFDVHYKEIKSDNFEGTFTLVYAFEK
Sequences:
>Translated_216_residues MPLFQTIQFNETTKILIWEITESLEELLSKVVLKEKTQKRLDGMKSQMHQRAFLSVRMLIQEMGFTDKDLHYDEFGKPYF DCHNYISITHSYHFAAIIISCETVGIDMELQREKIQRIADKFTDYECSYLDSSFTEEYIKKLTVIWGAKEAIFKIRNEKG ISFKDHINVSNFSLDETQTQASLHFDNLVKDFDVHYKEIKSDNFEGTFTLVYAFEK >Mature_215_residues PLFQTIQFNETTKILIWEITESLEELLSKVVLKEKTQKRLDGMKSQMHQRAFLSVRMLIQEMGFTDKDLHYDEFGKPYFD CHNYISITHSYHFAAIIISCETVGIDMELQREKIQRIADKFTDYECSYLDSSFTEEYIKKLTVIWGAKEAIFKIRNEKGI SFKDHINVSNFSLDETQTQASLHFDNLVKDFDVHYKEIKSDNFEGTFTLVYAFEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25508; Mature: 25377
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLFQTIQFNETTKILIWEITESLEELLSKVVLKEKTQKRLDGMKSQMHQRAFLSVRMLI CCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEMGFTDKDLHYDEFGKPYFDCHNYISITHSYHFAAIIISCETVGIDMELQREKIQRIAD HHCCCCCCCCCHHHCCCCHHHCCCEEEEECCCEEEEEEEEEEEECCCHHHHHHHHHHHHH KFTDYECSYLDSSFTEEYIKKLTVIWGAKEAIFKIRNEKGISFKDHINVSNFSLDETQTQ HHCCCCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHH ASLHFDNLVKDFDVHYKEIKSDNFEGTFTLVYAFEK HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC >Mature Secondary Structure PLFQTIQFNETTKILIWEITESLEELLSKVVLKEKTQKRLDGMKSQMHQRAFLSVRMLI CCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEMGFTDKDLHYDEFGKPYFDCHNYISITHSYHFAAIIISCETVGIDMELQREKIQRIAD HHCCCCCCCCCHHHCCCCHHHCCCEEEEECCCEEEEEEEEEEEECCCHHHHHHHHHHHHH KFTDYECSYLDSSFTEEYIKKLTVIWGAKEAIFKIRNEKGISFKDHINVSNFSLDETQTQ HHCCCCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHH ASLHFDNLVKDFDVHYKEIKSDNFEGTFTLVYAFEK HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA